FFCP PHASE1:Hg19::chr1:211307378..211307389,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3756 | |EntrezGene=3756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6250 | |HGNC=6250 | ||
|TSSclassifier=strong | |||
|UniProt=O95259 | |UniProt=O95259 | ||
|association_with_transcript=-63bp_to_ENST00000271751_5end | |association_with_transcript=-63bp_to_ENST00000271751_5end | ||
|cluster_id=chr1:211307378..211307389,- | |||
|coexpression_cluster_id=C3936 | |coexpression_cluster_id=C3936 | ||
|description=CAGE_peak_5_at_KCNH1_5end | |description=CAGE_peak_5_at_KCNH1_5end | ||
|id=chr1:211307378..211307389,- | |id=chr1:211307378..211307389,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.74e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.19e-53;3!UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.92e-08,6 | |||
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|short_description=p5@KCNH1 | |short_description=p5@KCNH1 | ||
}} | }} |
Latest revision as of 22:27, 24 September 2015
Short description: | p5@KCNH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNH1_5end |
Coexpression cluster: | C3936_anaplastic_nonsmall_occipital_postcentral_paracentral_frontal_insula |
Association with transcript: | -63bp_to_ENST00000271751_5end |
EntrezGene: | KCNH1 |
HGNC: | 6250 |
UniProt: | O95259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
segmental subdivision of nervous system | 4.39e-28 | 13 |
cerebellum | 2.08e-27 | 6 |
rhombic lip | 2.08e-27 | 6 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
regional part of metencephalon | 1.13e-18 | 9 |
metencephalon | 1.13e-18 | 9 |
future metencephalon | 1.13e-18 | 9 |
peripheral nervous system | 1.48e-18 | 8 |
segmental subdivision of hindbrain | 2.75e-14 | 12 |
hindbrain | 2.75e-14 | 12 |
presumptive hindbrain | 2.75e-14 | 12 |
posterior neural tube | 1.21e-11 | 15 |
chordal neural plate | 1.21e-11 | 15 |
layer of retina | 3.79e-11 | 4 |
sympathetic nervous system | 2.74e-09 | 5 |
autonomic nervous system | 2.74e-09 | 5 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
nervous system | 1.48e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.92e-08 | 6 |