FFCP PHASE1:Hg19::chr8:103424916..103424966,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:103424916..103424966,-
|short_description=p1@UBR5
|description=CAGE_peak_1_at_UBR5_5end
|association_with_transcript=0bp_to_ENST00000220959,NM_015902_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51366 | |EntrezGene=51366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16806 | |HGNC=16806 | ||
|TSSclassifier=strong | |||
|UniProt=O95071 | |UniProt=O95071 | ||
|association_with_transcript=0bp_to_ENST00000220959,NM_015902_5end | |||
|cluster_id=chr8:103424916..103424966,- | |||
|description=CAGE_peak_1_at_UBR5_5end | |||
|id=chr8:103424916..103424966,- | |||
|ontology_enrichment_celltype=CL:0000738!1.16e-26!140;CL:0000037!5.46e-24!172;CL:0000566!5.46e-24!172;CL:0002032!2.88e-22!165;CL:0000837!2.88e-22!165;CL:0002087!4.42e-21!119;CL:0002031!6.55e-21!124;CL:0000988!7.59e-21!182;CL:0000838!2.41e-15!52;CL:0000542!3.40e-15!53;CL:0000051!3.40e-15!53;CL:0000766!7.43e-10!76;CL:0000945!2.60e-09!24;CL:0000826!2.60e-09!24;CL:0000763!4.90e-09!112;CL:0000049!4.90e-09!112;CL:0000557!3.69e-08!71;CL:0000791!8.65e-08!18;CL:0000789!8.65e-08!18;CL:0002420!8.65e-08!18;CL:0002419!8.65e-08!18;CL:0000790!8.65e-08!18;CL:0002009!3.82e-07!65;CL:0000839!5.94e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.18e-09;53!CL:0000945;2.34e-09;24!CL:0000791;8.32e-08;18!CL:0000789;8.32e-08;18!CL:0002419;8.32e-08;18!CL:0002087;5.08e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.65e-27,136;CL:0000037,4.38e-24,168;CL:0002032,2.32e-22,161;CL:0000837,2.32e-22,161;CL:0000988,1.78e-21,177;CL:0002087,2.60e-21,115;CL:0002031,4.08e-21,120;CL:0000838,2.41e-15,52;CL:0000542,3.40e-15,53;CL:0000051,3.40e-15,53;CL:0000766,5.40e-10,72;CL:0000945,2.60e-09,24;CL:0000826,2.60e-09,24;CL:0000763,4.67e-09,108;CL:0000049,4.67e-09,108;CL:0000557,2.92e-08,67;CL:0000791,8.65e-08,18;CL:0000789,8.65e-08,18;CL:0002420,8.65e-08,18;CL:0002419,8.65e-08,18;CL:0000790,8.65e-08,18;CL:0002009,3.11e-07,61;CL:0000839,5.11e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;2.18e-09;53!CL:0000790;8.32e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-18!115;UBERON:0002390!2.26e-09!102;UBERON:0003061!2.26e-09!102;UBERON:0001049!6.56e-08!57;UBERON:0005068!6.56e-08!57;UBERON:0006241!6.56e-08!57;UBERON:0007135!6.56e-08!57;UBERON:0002193!7.48e-08!112;UBERON:0003080!3.60e-07!42;UBERON:0002780!8.44e-07!41;UBERON:0001890!8.44e-07!41;UBERON:0006240!8.44e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.69e-18,114;UBERON:0002390,2.03e-09,98;UBERON:0003061,2.03e-09,98;UBERON:0002193,7.46e-08,108;UBERON:0001049,1.48e-07,56;UBERON:0005068,1.48e-07,56;UBERON:0006241,1.48e-07,56;UBERON:0007135,1.48e-07,56;UBERON:0000073,4.17e-07,53;UBERON:0002616,4.17e-07,53;UBERON:0002780,8.44e-07,41;UBERON:0001890,8.44e-07,41;UBERON:0003080,8.44e-07,41;UBERON:0006240,8.44e-07,41 | |||
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| ||
|short_description=p1@UBR5 | |||
}} | }} |
Latest revision as of 22:27, 24 September 2015
Short description: | p1@UBR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBR5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000220959, NM_015902_5end |
EntrezGene: | UBR5 |
HGNC: | 16806 |
UniProt: | O95071 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.65e-27 | 136 |
hematopoietic stem cell | 4.38e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.32e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-22 | 161 |
hematopoietic cell | 1.78e-21 | 177 |
nongranular leukocyte | 2.60e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 4.08e-21 | 120 |
lymphoid lineage restricted progenitor cell | 2.41e-15 | 52 |
lymphocyte | 3.40e-15 | 53 |
common lymphoid progenitor | 3.40e-15 | 53 |
myeloid leukocyte | 5.40e-10 | 72 |
lymphocyte of B lineage | 2.60e-09 | 24 |
pro-B cell | 2.60e-09 | 24 |
myeloid cell | 4.67e-09 | 108 |
common myeloid progenitor | 4.67e-09 | 108 |
granulocyte monocyte progenitor cell | 2.92e-08 | 67 |
mature alpha-beta T cell | 8.65e-08 | 18 |
alpha-beta T cell | 8.65e-08 | 18 |
immature T cell | 8.65e-08 | 18 |
mature T cell | 8.65e-08 | 18 |
immature alpha-beta T cell | 8.65e-08 | 18 |
macrophage dendritic cell progenitor | 3.11e-07 | 61 |
myeloid lineage restricted progenitor cell | 5.11e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.69e-18 | 114 |
hematopoietic system | 2.03e-09 | 98 |
blood island | 2.03e-09 | 98 |
hemolymphoid system | 7.46e-08 | 108 |
neural tube | 1.48e-07 | 56 |
neural rod | 1.48e-07 | 56 |
future spinal cord | 1.48e-07 | 56 |
neural keel | 1.48e-07 | 56 |
regional part of nervous system | 4.17e-07 | 53 |
regional part of brain | 4.17e-07 | 53 |
regional part of forebrain | 8.44e-07 | 41 |
forebrain | 8.44e-07 | 41 |
anterior neural tube | 8.44e-07 | 41 |
future forebrain | 8.44e-07 | 41 |