FFCP PHASE1:Hg19::chr2:220491935..220491942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt=P48751 | |UniProt=P48751 | ||
|association_with_transcript=-106bp_to_ENST00000358055_5end | |association_with_transcript=-106bp_to_ENST00000358055_5end | ||
|cluster_id=chr2:220491935..220491942,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_23_at_SLC4A3_5end | |description=CAGE_peak_23_at_SLC4A3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!1.41e-09!7;CL:0000586!1.41e-09!7 | |ontology_enrichment_celltype=CL:0000039!1.41e-09!7;CL:0000586!1.41e-09!7 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.42e-195;1!UBERON:0004872;1.78e-29;7 | |ontology_enrichment_development_v019=UBERON:0004140;5.42e-195;1!UBERON:0004872;1.78e-29;7 | ||
|ontology_enrichment_disease=DOID:178!5.53e-17!1;DOID:326!5.53e-17!1;DOID:3978!5.53e-17!1;DOID:3394!5.53e-17!1;DOID:5844!5.53e-17!1;DOID:114!3.71e-09!2 | |ontology_enrichment_disease=DOID:178!5.53e-17!1;DOID:326!5.53e-17!1;DOID:3978!5.53e-17!1;DOID:3394!5.53e-17!1;DOID:5844!5.53e-17!1;DOID:114!3.71e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.11e-17!8;UBERON:0002084!6.47e-17!1;UBERON:0002082!6.47e-17!1;UBERON:0004706!6.47e-17!1;UBERON:0002135!8.86e-17!1;UBERON:0003135!4.85e-13!11;UBERON:0000991!6.75e-12!21;UBERON:0009196!6.75e-12!21;UBERON:0009117!6.75e-12!21;UBERON:0005564!6.75e-12!21;UBERON:0004176!2.27e-11!22;UBERON:0007100!1.55e-09!27;UBERON:0002133!4.70e-09!2;UBERON:0003101!8.43e-07!22;UBERON:0000079!8.43e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!1.11e-17!8;UBERON:0002084!6.47e-17!1;UBERON:0002082!6.47e-17!1;UBERON:0004706!6.47e-17!1;UBERON:0002135!8.86e-17!1;UBERON:0003135!4.85e-13!11;UBERON:0000991!6.75e-12!21;UBERON:0009196!6.75e-12!21;UBERON:0009117!6.75e-12!21;UBERON:0005564!6.75e-12!21;UBERON:0004176!2.27e-11!22;UBERON:0007100!1.55e-09!27;UBERON:0002133!4.70e-09!2;UBERON:0003101!8.43e-07!22;UBERON:0000079!8.43e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.80e-10;22!UBERON:0007100;2.15e-09;25!UBERON:0003103;2.32e-07;61 | |ontology_enrichment_uberon_v019=UBERON:0000948;1.80e-10;22!UBERON:0007100;2.15e-09;25!UBERON:0003103;2.32e-07;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.01e-09,24;UBERON:0005498,1.01e-09,24;UBERON:0004140,1.01e-09,24;UBERON:0009881,1.01e-09,24;UBERON:0004141,1.01e-09,24;UBERON:0003084,1.01e-09,24;UBERON:0007005,1.01e-09,24;UBERON:0004139,1.01e-09,24;UBERON:0004291,1.01e-09,24;UBERON:0007100,8.32e-09,27 | |||
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|short_description=p23@SLC4A3 | |short_description=p23@SLC4A3 | ||
}} | }} |
Latest revision as of 22:14, 24 September 2015
Short description: | p23@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -106bp_to_ENST00000358055_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | P48751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart | 1.01e-09 | 24 |
primitive heart tube | 1.01e-09 | 24 |
primary heart field | 1.01e-09 | 24 |
anterior lateral plate mesoderm | 1.01e-09 | 24 |
heart tube | 1.01e-09 | 24 |
heart primordium | 1.01e-09 | 24 |
cardiac mesoderm | 1.01e-09 | 24 |
cardiogenic plate | 1.01e-09 | 24 |
heart rudiment | 1.01e-09 | 24 |
primary circulatory organ | 8.32e-09 | 27 |