FFCP PHASE1:Hg19::chr22:42017280..42017325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2547 | |EntrezGene=2547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4055 | |HGNC=4055 | ||
|TSSclassifier=strong | |||
|UniProt=B1AHC8,F5H1I8,P12956 | |UniProt=B1AHC8,F5H1I8,P12956 | ||
|association_with_transcript=0bp_to_ENST00000402580,ENST00000428575,ENST00000464116,NM_001469,uc003bao.1,uc003bap.1,uc011apc.1_5end | |association_with_transcript=0bp_to_ENST00000402580,ENST00000428575,ENST00000464116,NM_001469,uc003bao.1,uc003bap.1,uc011apc.1_5end | ||
|cluster_id=chr22:42017280..42017325,+ | |||
|description=CAGE_peak_1_at_XRCC6_5end | |description=CAGE_peak_1_at_XRCC6_5end | ||
|id=chr22:42017280..42017325,+ | |id=chr22:42017280..42017325,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.44e-13!235;DOID:14566!1.08e-12!239;DOID:2531!2.01e-10!51;DOID:0060083!2.01e-10!51;DOID:1240!5.34e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.95e-07;39!DOID:2531;9.00e-07;51!DOID:0060083;9.00e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.44e-13,235;DOID:14566,1.08e-12,239;DOID:2531,2.01e-10,51;DOID:0060083,2.01e-10,51;DOID:1240,5.34e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.63e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!1.63e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.61e-07;9!UBERON:0001557;1.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.63e-07,9 | |||
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| ||
|short_description=p1@XRCC6 | |short_description=p1@XRCC6 | ||
}} | }} |
Latest revision as of 22:07, 24 September 2015
Short description: | p1@XRCC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XRCC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402580, ENST00000428575, ENST00000464116, NM_001469, uc003bao.1, uc003bap.1, uc011apc.1_5end |
EntrezGene: | XRCC6 |
HGNC: | 4055 |
UniProt: | B1AHC8F5H1I8P12956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.44e-13 | 235 |
disease of cellular proliferation | 1.08e-12 | 239 |
hematologic cancer | 2.01e-10 | 51 |
immune system cancer | 2.01e-10 | 51 |
leukemia | 5.34e-08 | 39 |