FFCP PHASE1:Hg19::chrX:33229657..33229675,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:33229657..33229675,- to FFCP PHASE1:Hg19::chrX:33229657..33229675,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6K1,P11532,Q8N754,Q8WYE8 | |UniProt=F5H6K1,P11532,Q8N754,Q8WYE8 | ||
|association_with_transcript=0bp_to_ENST00000488902,ENST00000542849,NM_004006,uc004dda.1,uc010ngo.1,uc010ngr.1_5end | |||
|cluster_id=chrX:33229657..33229675,- | |||
|coexpression_cluster_id=C1113 | |||
|description=CAGE_peak_2_at_DMD_5end | |||
|id=chrX:33229657..33229675,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.67e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.21e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.20e-53!115;UBERON:0002616!8.36e-25!59;UBERON:0001049!2.55e-24!57;UBERON:0005068!2.55e-24!57;UBERON:0006241!2.55e-24!57;UBERON:0007135!2.55e-24!57;UBERON:0000955!5.13e-19!69;UBERON:0006238!5.13e-19!69;UBERON:0003075!7.01e-19!86;UBERON:0007284!7.01e-19!86;UBERON:0003080!3.61e-18!42;UBERON:0001017!7.79e-18!82;UBERON:0002780!1.48e-17!41;UBERON:0001890!1.48e-17!41;UBERON:0006240!1.48e-17!41;UBERON:0005743!1.63e-17!86;UBERON:0002346!6.51e-17!90;UBERON:0000073!3.85e-15!94;UBERON:0001016!3.85e-15!94;UBERON:0002020!9.99e-15!34;UBERON:0003528!9.99e-15!34;UBERON:0001893!1.36e-14!34;UBERON:0000481!1.88e-14!347;UBERON:0002791!3.18e-14!33;UBERON:0001869!2.70e-13!32;UBERON:0004111!6.13e-12!241;UBERON:0003056!8.81e-12!61;UBERON:0000153!1.60e-11!129;UBERON:0007811!1.60e-11!129;UBERON:0000477!2.06e-11!286;UBERON:0000025!5.17e-11!194;UBERON:0000033!5.69e-11!123;UBERON:0000468!9.10e-11!659;UBERON:0000119!1.13e-10!312;UBERON:0000483!1.23e-10!309;UBERON:0000475!4.28e-10!365;UBERON:0000956!6.26e-10!25;UBERON:0000203!6.26e-10!25;UBERON:0002619!1.62e-09!22;UBERON:0004121!2.68e-09!169;UBERON:0001950!1.35e-08!20;UBERON:0002385!1.47e-08!63;UBERON:0001015!1.47e-08!63;UBERON:0000383!1.47e-08!63;UBERON:0000924!1.71e-08!173;UBERON:0006601!1.71e-08!173;UBERON:0000922!4.13e-08!612;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0001134!1.30e-07!61;UBERON:0002036!1.30e-07!61;UBERON:0003082!1.30e-07!61;UBERON:0000923!2.19e-07!604;UBERON:0005291!2.19e-07!604;UBERON:0006598!2.19e-07!604;UBERON:0002532!2.19e-07!604;UBERON:0003076!2.38e-07!15;UBERON:0003057!2.38e-07!15;UBERON:0000467!5.19e-07!625;UBERON:0000480!6.77e-07!626;UBERON:0007100!7.22e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.88e-15;114!UBERON:0001893;1.10e-14;34!UBERON:0003528;2.25e-14;34!UBERON:0002020;2.25e-14;34!UBERON:0002791;3.26e-14;32!UBERON:0001869;7.42e-14;32!UBERON:0002780;8.11e-14;41!UBERON:0001890;8.11e-14;41!UBERON:0000073;6.62e-13;53!UBERON:0002616;6.62e-13;53!UBERON:0002619;5.55e-11;22!UBERON:0000956;6.98e-11;25!UBERON:0000203;6.98e-11;25!UBERON:0001134;2.04e-10;16!UBERON:0002036;2.04e-10;16!UBERON:0001950;7.65e-10;20!UBERON:0001017;1.43e-09;75!UBERON:0004921;5.80e-09;33!UBERON:0000955;9.30e-09;68!UBERON:0002385;4.37e-08;31!UBERON:0001015;4.37e-08;31!UBERON:0000383;4.37e-08;31!UBERON:0000125;6.51e-08;9!UBERON:0002308;6.51e-08;9!UBERON:0002420;1.62e-07;9!UBERON:0007245;1.62e-07;9!UBERON:0010009;1.62e-07;9!UBERON:0010011;1.62e-07;9!UBERON:0000454;1.62e-07;9!UBERON:0001016;2.31e-07;83!UBERON:0011216;3.30e-07;132!UBERON:0005409;5.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.31e-58,114;UBERON:0001049,2.03e-25,56;UBERON:0005068,2.03e-25,56;UBERON:0006241,2.03e-25,56;UBERON:0007135,2.03e-25,56;UBERON:0000073,4.86e-23,53;UBERON:0002616,4.86e-23,53;UBERON:0000955,2.24e-20,68;UBERON:0006238,2.24e-20,68;UBERON:0001017,1.29e-19,81;UBERON:0003075,4.74e-19,82;UBERON:0007284,4.74e-19,82;UBERON:0002780,7.13e-19,41;UBERON:0001890,7.13e-19,41;UBERON:0003080,7.13e-19,41;UBERON:0006240,7.13e-19,41;UBERON:0002346,2.51e-17,86;UBERON:0003528,4.42e-17,34;UBERON:0002020,4.42e-17,34;UBERON:0001016,6.30e-17,89;UBERON:0001893,6.48e-17,34;UBERON:0011216,1.56e-16,223;UBERON:0010314,7.44e-16,132;UBERON:0002791,1.15e-15,32;UBERON:0001869,2.78e-15,32;UBERON:0010371,1.96e-13,104;UBERON:0003056,1.27e-11,61;UBERON:0002619,4.15e-11,22;UBERON:0000956,4.88e-11,25;UBERON:0000203,4.88e-11,25;UBERON:0004111,5.61e-11,240;UBERON:0000483,1.62e-10,306;UBERON:0000119,3.98e-10,309;UBERON:0000025,6.04e-10,192;UBERON:0001950,6.14e-10,20;UBERON:0004121,9.10e-10,171;UBERON:0000924,9.10e-10,171;UBERON:0006601,9.10e-10,171;UBERON:0002050,2.89e-09,564;UBERON:0000923,3.29e-09,560;UBERON:0010316,3.29e-09,560;UBERON:0005291,3.29e-09,560;UBERON:0006598,3.29e-09,560;UBERON:0010317,3.29e-09,560;UBERON:0002532,3.29e-09,560;UBERON:0005423,2.99e-08,581;UBERON:0000922,4.06e-08,592;UBERON:0002385,4.76e-08,64;UBERON:0001015,4.76e-08,64;UBERON:0000383,4.76e-08,64;UBERON:0000125,6.83e-08,9;UBERON:0002308,6.83e-08,9;UBERON:0003076,9.87e-08,15;UBERON:0003057,9.87e-08,15;UBERON:0002420,1.41e-07,9;UBERON:0007245,1.41e-07,9;UBERON:0010009,1.41e-07,9;UBERON:0010011,1.41e-07,9;UBERON:0000454,1.41e-07,9;UBERON:0001134,5.41e-07,62;UBERON:0002036,5.41e-07,62;UBERON:0003082,5.41e-07,62 | |||
|phase1_expression=15.4426622379973,6.20891519283851,3.10099689011137,8.00586386825043,4.02264984984559,13.0850778615055,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,2.10402800032079,1.65698687863958,0,0,0,0,0.123121058076788,0,0.313454721478088,1.43117993565528,0.136874425072884,1.63205431473244,0,0,0,0,0,2.94150634300544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.767175371061182,0,0,0,0,0,0.0945348171640679,0,0,5.30465255765736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,3.47880366186723,3.29239330327907,1.45650098894541,5.73673241497627,0,2.24271040056923,0,1.48000529050296,1.55605517699883,2.15537075311501,1.79808093424805,4.8434376846378,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0,3.64064544775211,0.718618141816238,0,0.125118519871964,0,0,0,0,0.794025282120147,0,0.213557388818567,0,0,0,0.257640540045629,0,0.675105328965065,0.779496041289589,0,0,1.61646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,5.31710916013264,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.115930404975077,2.34817388471643,0,0,0.761016608938393,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,2.85740524314761,1.14596527667483,0,0,1.02827492703324,0,2.28661146104463,0.336393253036082,0,0.36669142910475,4.91232519879556,0,0.845302752556,3.19125739901845,2.08014873822732,0,1.41849132023278,0.266422179016099,11.0093055116774,1.08524321078289,1.64648067356154,0,6.75244702610837,0,0.602878754119172,0,0.699810938274399,0,0,0,6.70949595376431,9.18895486672911,0,15.9259437334337,5.54786070886035,9.84835297819426,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,4.66227668532732,1.50051156317903,1.08506009479894,0.207970861530807,0.178428988797162,0,0,1.50473049863859,2.27407504055985,1.03473071292505,0,0.553107505625109,0,1.37060810223918,1.37257369524342,0,0,0,0.303127571446259,0,0,4.71404834855676,19.4896706075839,3.64858122762996,0.768834895534206,5.11707249066703,3.21707842287215,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.650756789328606,4.12164046590889,0.54941678891006,0.495056999523528,0,0,3.21367859688319,3.28680442193215,1.23238893691716,1.68854042198743,3.85942402956686,2.0409846524972,2.17525040871343,3.15338521439573,15.3135101312388,0,0,0.255225424989168,0,0,2.20368642781448,0.6970372701606,0.308033580176089,0,0,0.74129687641568,4.00749682877575,2.60510858551767,17.7172477842486,4.38449446024797,0,1.71175595213568,0,0,3.23770423649967,7.41249980287348,3.88780927740765,0.606547444719948,1.58510321173008,0,2.43816869544795,0.487426979262569,1.05650146756755,1.63799893689583,0.141405431953713,0,0.551365343546124,0,1.31535265576129,0,1.9676842561399,2.02910376962704,0.30982349809975,0.281695602532241,1.43411352204052,4.61770492761669,1.426684205925,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,4.89547764039252,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,46.5896010084623,0.606802608747567,0,0,0.23874448473769,2.96964680832639,0,2.98244294329889,7.31480965334666,2.67140892054974,0,0,34.270653979184,20.7212936648361,0,0,0,0,0,0,0,64.4141438809176,0,0,0,9.74065030699438,0,0,0,12.3249927823915,0,0,0,0,0,0,11.5146380155799,2.05013945663194,15.2581736317083,10.6156089533976,5.31985714116385,5.04586413454137,0,0,39.7832836464631,0,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,13.9336670350991,39.2751586394826,29.329446956814,0,0,0,14.4912435908456,72.231988256891,8.43352004611221,0,0,0,45.3772063276799,26.6179575307061,1.53036380815245,7.26645665727612,0,0,0,0,0,0,0,0.554698692052555,0,0,0,21.3166535255277,0.171986032471617,0.870806981601766,0.877071805034227,0.739039113478883,31.1334742927826,16.239127311236,9.94315259434343,0,0,7.09080914705841,0,0,20.4914874949778,1.9980960958213,0,2.97795150031381,0,0,0,0.235694034616795,0,0,0,0,23.4163912596818,15.8810239514712,0,2.14882720709979,0,67.3070587066133,88.6850840925216,9.33234931949858,11.5813820289415,34.3380838509257,57.1318931051194,101.98451123485,5.40449825313605,0,0,0,0,0,0,3.97614844904652,6.40156008724405,0,0,0,0,0,2.67298049295309,0,1.57611414598396,1.10154635083496,0,0,0,48.599282193389,28.4699547257136,0,2.71499800876856,1.72844298240254,0.653174720218818,0,0,0.681552087141687,0,0.879313402068495,0,9.17908990167009,9.2562821219883,0,0,7.90226853000941,21.0653768833552,4.55662960881915,0.992332043623902,0,0,0,78.3385636852043,81.7249054514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| ||
|short_description=p2@DMD | |||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p2@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DMD_5end |
Coexpression cluster: | C1113_heart_skeletal_smooth_bladder_penis_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000488902, ENST00000542849, NM_004006, uc004dda.1, uc010ngo.1, uc010ngr.1_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | F5H6K1P11532Q8N754Q8WYE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data