FFCP PHASE1:Hg19::chrX:33229614..33229635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=P11532 | |UniProt=P11532 | ||
|association_with_transcript=0bp_to_ENST00000357033_5end | |association_with_transcript=0bp_to_ENST00000357033_5end | ||
|cluster_id=chrX:33229614..33229635,- | |||
|coexpression_cluster_id=C1113 | |||
|description=CAGE_peak_3_at_DMD_5end | |description=CAGE_peak_3_at_DMD_5end | ||
|id=chrX:33229614..33229635,- | |id=chrX:33229614..33229635,- | ||
|ontology_enrichment_celltype=CL:0000680!1.02e-10!57;CL:0000056!1.02e-10!57;CL:0000355!1.02e-10!57;CL:0000187!2.83e-09!54;CL:0000183!8.34e-09!59;CL:0000393!1.70e-07!60;CL:0000211!1.70e-07!60 | |ontology_enrichment_celltype=CL:0000680!1.02e-10!57;CL:0000056!1.02e-10!57;CL:0000355!1.02e-10!57;CL:0000187!2.83e-09!54;CL:0000183!8.34e-09!59;CL:0000393!1.70e-07!60;CL:0000211!1.70e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.54e-08,58;CL:0000056,1.54e-08,58;CL:0000355,1.54e-08,58;CL:0000187,5.27e-07,55;CL:0000136,6.15e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;2.90e-12;16!UBERON:0002036;2.90e-12;16!UBERON:0002385;1.00e-10;31!UBERON:0001015;1.00e-10;31!UBERON:0000383;1.00e-10;31!UBERON:0007023;1.62e-09;114!UBERON:0004921;2.35e-08;33!UBERON:0007100;1.10e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.97e-34,114;UBERON:0002385,1.84e-12,64;UBERON:0001015,1.84e-12,64;UBERON:0000383,1.84e-12,64;UBERON:0001134,3.47e-11,62;UBERON:0002036,3.47e-11,62;UBERON:0003082,3.47e-11,62;UBERON:0003104,5.53e-10,160;UBERON:0009142,5.53e-10,160;UBERON:0011216,6.11e-10,223;UBERON:0007524,5.03e-09,73;UBERON:0003077,1.30e-08,72;UBERON:0007285,1.30e-08,72;UBERON:0002329,2.30e-08,71;UBERON:0003059,2.30e-08,71;UBERON:0007282,2.30e-08,71;UBERON:0004290,2.30e-08,71;UBERON:0009618,2.30e-08,71;UBERON:0001049,2.78e-08,56;UBERON:0005068,2.78e-08,56;UBERON:0006241,2.78e-08,56;UBERON:0007135,2.78e-08,56;UBERON:0000479,6.83e-08,773;UBERON:0002050,8.91e-08,564;UBERON:0000923,1.01e-07,560;UBERON:0010316,1.01e-07,560;UBERON:0005291,1.01e-07,560;UBERON:0006598,1.01e-07,560;UBERON:0010317,1.01e-07,560;UBERON:0002532,1.01e-07,560;UBERON:0007100,1.31e-07,27;UBERON:0010314,2.07e-07,132;UBERON:0001017,2.44e-07,81;UBERON:0004111,2.62e-07,240;UBERON:0000483,3.06e-07,306;UBERON:0003075,3.28e-07,82;UBERON:0007284,3.28e-07,82;UBERON:0000073,5.48e-07,53;UBERON:0002616,5.48e-07,53;UBERON:0000119,6.16e-07,309;UBERON:0005423,7.20e-07,581;UBERON:0000955,7.69e-07,68;UBERON:0006238,7.69e-07,68;UBERON:0000922,9.59e-07,592 | |||
|phase1_expression=13.9892352038329,7.49351833618441,6.20199378022273,10.007329835313,9.83314407740033,14.8297549097063,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,3.46545788288131,3.97676850873499,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,1.25381888591235,1.43117993565528,0.136874425072884,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,1.2786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,5.04269440666194,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,1.37559020970034,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.446498641420399,0.22452937262617,0,0,0,0,0,0,0.436094052142534,8.94549513051573,4.55869841992487,5.95841313659485,12.6208113129478,0.709336764396714,2.80338800071154,0,1.72667283892012,5.91300967259556,2.02066008104532,1.63461903113459,5.44886739521753,2.30470369792,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0.375355559615893,0,0,0,0,2.1552114800404,0.358779271377724,0.213557388818567,0,0,0,2.06112432036503,0.558350568994769,2.02531598689519,3.31285817548075,0,0,4.20279747728911,1.06502877754984,0,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,4.41026134156626,0,0.982827216677626,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,1.76113041353732,0.144366447761074,0,0.761016608938393,0,0,0,0,0,0,0,0,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.25248486685276,1.52394946301206,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.448524337381443,0,0.07333828582095,4.52451005152222,0,0,2.39344304926383,0,0,0,0.266422179016099,8.86463560680515,3.25572963234866,4.11620168390384,0,7.46323092359346,1.58390374586686,0.301439377059586,0,0.499864955910285,0,0,0,11.9812427745791,11.4861935834114,1.42636905040718,18.9663511734529,8.21905290201534,8.59492623551499,0,0,0,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,4.17151071845076,2.00068208423871,1.08506009479894,0,0,0.157702415033935,0,2.10662269809403,2.27407504055985,1.03473071292505,0.664225598535437,0.368738337083406,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,8.18755765801964,25.4746875658184,3.08726103876381,1.28139149255701,5.62877973973374,2.57366273829772,7.42090332224955,0,0,0,0.519254429183621,0,0,0,0,0.229628896329213,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,3.09123034943167,0.0915694648183434,0.330037999682352,0,0,8.03419649220798,2.90012154876366,1.3864375540318,1.68854042198743,3.72158745708233,3.6522883255213,2.75531718437034,1.87498580315422,12.7315810974834,0,0,0.638063562472921,0,0.464845549297286,11.333244485903,0.6970372701606,0.308033580176089,0,2.60979897622522,2.40921484835096,9.30311763822943,6.32669227911434,17.0844889348112,5.52827562379092,0.767693373934002,6.41908482050881,0,0,3.95719406683292,9.05972198128981,3.65218447271628,1.01091240786658,0,0,0.975267478179181,1.46228093778771,2.11300293513511,1.22849920267187,0.424216295861138,0,0,0.66343897524122,2.63070531152258,2.89387767133344,1.31178950409327,1.42037263873893,0.30982349809975,0.281695602532241,1.86434757865267,4.61770492761669,0.7133421029625,0.709522128141196,0,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9387830812729,0.970884173996107,0,0,0.95497793895076,0,0.614321404198464,1.9882952955326,1.26602474769461,3.45056985571008,0,0,30.8834381789158,19.0635901716492,0,0,0,0,0,0,0,56.3253846186891,0,0,0.969332746095218,1.39152147242777,0,0,0,7.97499532978273,0,0,0,0,0,0,1.77148277162768,0.844175070377856,1.52581736317083,2.98564001814306,1.47773809476774,1.97446857438575,0,0,44.5541996736985,0,0,0,0,0.31900115973192,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,22.2913062548415,25.6632660872123,0,0,0,3.63966118095656,68.2191000203971,2.34264445725339,0,0,0,31.5667522279512,12.0990716048664,0,8.84612114798832,0,0,0,0,0,0,0,0.277349346026277,0,0,0,18.3463001654132,1.0319161948297,0.387025325156341,0.292357268344742,0.0821154570532092,20.4646824790565,15.0917976642465,7.00540296419651,0,0,2.34249945036751,0,0.320635281006135,13.4475386685792,0.599428828746391,0,2.1761953271524,0,0,0,0,0,0,0,0,3.60252173225874,4.24406674565178,0,0.859530882839914,0,65.0727994964352,73.5604961077505,12.2038414178058,13.9775300349294,27.4704670807405,47.7586918925607,101.514226927443,8.64719720501769,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.789744236554321,0,1.49730843868477,1.04909176269996,0,0,0,45.7405008878955,30.4562306368099,0,4.88699641578341,0,2.28611152076586,0,0,2.21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| ||
|short_description=p3@DMD | |short_description=p3@DMD | ||
}} | }} |
Latest revision as of 22:03, 24 September 2015
Short description: | p3@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DMD_5end |
Coexpression cluster: | C1113_heart_skeletal_smooth_bladder_penis_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000357033_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | P11532 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.54e-08 | 58 |
myoblast | 1.54e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-08 | 58 |
muscle cell | 5.27e-07 | 55 |
fat cell | 6.15e-07 | 15 |