FFCP PHASE1:Hg19::chr19:7795730..7795740,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:7795730..7795740,-
|short_description=p5@CLEC4G
|description=CAGE_peak_5_at_CLEC4G_5end
|association_with_transcript=-46bp_to_BC039679_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339390 | |EntrezGene=339390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=24591 | |HGNC=24591 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_BC039679_5end | |||
|cluster_id=chr19:7795730..7795740,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_5_at_CLEC4G_5end | |||
|id=chr19:7795730..7795740,- | |||
|ontology_enrichment_celltype=CL:0002619!1.90e-10!3;CL:0000842!2.88e-09!3;CL:0002194!2.60e-07!63;CL:0000576!2.60e-07!63;CL:0000040!2.60e-07!63;CL:0000559!2.60e-07!63;CL:0000224!4.80e-07!4;CL:0002009!5.48e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.19e-12;5!CL:0000990;1.04e-08;8!CL:0000451;2.32e-07;10!CL:0000182;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.19e-12,5;CL:0001029,2.19e-12,5;CL:0000990,1.04e-08,8;CL:0000451,2.32e-07,10;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.45e-18;4!UBERON:0007284;9.45e-18;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-18!115;UBERON:0001869!6.17e-16!32;UBERON:0002020!6.41e-15!34;UBERON:0003528!6.41e-15!34;UBERON:0001893!8.12e-15!34;UBERON:0002780!1.16e-13!41;UBERON:0001890!1.16e-13!41;UBERON:0006240!1.16e-13!41;UBERON:0003080!2.97e-13!42;UBERON:0002791!3.17e-13!33;UBERON:0002619!1.98e-12!22;UBERON:0000200!1.48e-11!6;UBERON:0001950!2.23e-11!20;UBERON:0000956!9.89e-11!25;UBERON:0000203!9.89e-11!25;UBERON:0001049!3.10e-10!57;UBERON:0005068!3.10e-10!57;UBERON:0006241!3.10e-10!57;UBERON:0007135!3.10e-10!57;UBERON:0002616!9.24e-10!59;UBERON:0001871!6.11e-09!7;UBERON:0002771!6.24e-09!3;UBERON:0002346!7.29e-09!90;UBERON:0001017!9.41e-09!82;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0002390!1.32e-08!102;UBERON:0003061!1.32e-08!102;UBERON:0003075!1.98e-08!86;UBERON:0007284!1.98e-08!86;UBERON:0002193!3.35e-08!112;UBERON:0005743!3.81e-08!86;UBERON:0003056!4.76e-08!61;UBERON:0002360!3.50e-07!2;UBERON:0000094!3.50e-07!2;UBERON:0007645!3.50e-07!2;UBERON:0000073!5.67e-07!94;UBERON:0001016!5.67e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.34e-66;1!UBERON:0005208;3.34e-66;1!UBERON:0004145;3.34e-66;1!UBERON:0005946;3.34e-66;1!UBERON:0005965;3.34e-66;1!UBERON:0002078;3.34e-66;1!UBERON:0002081;5.96e-34;2!UBERON:0002133;5.96e-34;2!UBERON:0003978;3.66e-23;3!UBERON:0004151;3.66e-23;3!UBERON:0000946;3.66e-23;3!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.39e-66,1;UBERON:0005208,2.39e-66,1;UBERON:0005946,2.39e-66,1;UBERON:0005965,2.39e-66,1;UBERON:0002078,2.39e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0002133,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0003978,3.27e-23,3;UBERON:0009751,3.27e-23,3;UBERON:0004151,3.27e-23,3;UBERON:0000946,3.27e-23,3;UBERON:0002523,3.27e-23,3;UBERON:0005983,3.27e-23,3;UBERON:0004145,3.27e-23,3;UBERON:0002165,3.27e-23,3;UBERON:0002062,3.27e-23,3;UBERON:0007280,3.27e-23,3;UBERON:0004797,8.99e-11,7;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10 | |||
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| ||
|short_description=p5@CLEC4G | |||
}} | }} |
Latest revision as of 21:48, 24 September 2015
Short description: | p5@CLEC4G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLEC4G_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -46bp_to_BC039679_5end |
EntrezGene: | CLEC4G |
HGNC: | 24591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.19e-12 | 5 |
common dendritic progenitor | 2.19e-12 | 5 |
conventional dendritic cell | 1.04e-08 | 8 |
dendritic cell | 2.32e-07 | 10 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.39e-66 | 1 |
right atrium valve | 2.39e-66 | 1 |
outflow tract of atrium | 2.39e-66 | 1 |
outflow part of right atrium | 2.39e-66 | 1 |
right cardiac atrium | 2.39e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
atrioventricular valve | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
valve | 3.27e-23 | 3 |
cardiac mesenchyme | 3.27e-23 | 3 |
cardiac chamber | 3.27e-23 | 3 |
cardial valve | 3.27e-23 | 3 |
tunica intima | 3.27e-23 | 3 |
heart layer | 3.27e-23 | 3 |
outflow tract | 3.27e-23 | 3 |
endocardium | 3.27e-23 | 3 |
endocardial cushion | 3.27e-23 | 3 |
presumptive endocardium | 3.27e-23 | 3 |
blood vessel layer | 8.99e-11 | 7 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |