FFCP PHASE1:Hg19::chr5:137368726..137368784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51306 | |EntrezGene=51306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1335 | |HGNC=1335 | ||
|TSSclassifier=strong | |||
|UniProt=G3V0H9 | |UniProt=G3V0H9 | ||
|association_with_transcript=0bp_to_ENST00000420893,ENST00000425075_5end | |association_with_transcript=0bp_to_ENST00000420893,ENST00000425075_5end | ||
|cluster_id=chr5:137368726..137368784,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_FAM13B_5end | |description=CAGE_peak_1_at_FAM13B_5end | ||
|id=chr5:137368726..137368784,- | |id=chr5:137368726..137368784,- | ||
|ontology_enrichment_celltype=CL:0000738!5.43e-38!140;CL:0000037!2.71e-35!172;CL:0000566!2.71e-35!172;CL:0002032!9.47e-33!165;CL:0000837!9.47e-33!165;CL:0002031!9.10e-32!124;CL:0000988!1.22e-31!182;CL:0002087!5.26e-31!119;CL:0000766!5.69e-29!76;CL:0000557!4.88e-26!71;CL:0000763!5.41e-24!112;CL:0000049!5.41e-24!112;CL:0000839!5.97e-24!70;CL:0002009!1.17e-22!65;CL:0002194!1.30e-22!63;CL:0000576!1.30e-22!63;CL:0000040!1.30e-22!63;CL:0000559!1.30e-22!63;CL:0002057!4.96e-19!42;CL:0000860!3.43e-18!45;CL:0000838!1.50e-08!52;CL:0000542!3.25e-08!53;CL:0000051!3.25e-08!53 | |ontology_enrichment_celltype=CL:0000738!5.43e-38!140;CL:0000037!2.71e-35!172;CL:0000566!2.71e-35!172;CL:0002032!9.47e-33!165;CL:0000837!9.47e-33!165;CL:0002031!9.10e-32!124;CL:0000988!1.22e-31!182;CL:0002087!5.26e-31!119;CL:0000766!5.69e-29!76;CL:0000557!4.88e-26!71;CL:0000763!5.41e-24!112;CL:0000049!5.41e-24!112;CL:0000839!5.97e-24!70;CL:0002009!1.17e-22!65;CL:0002194!1.30e-22!63;CL:0000576!1.30e-22!63;CL:0000040!1.30e-22!63;CL:0000559!1.30e-22!63;CL:0002057!4.96e-19!42;CL:0000860!3.43e-18!45;CL:0000838!1.50e-08!52;CL:0000542!3.25e-08!53;CL:0000051!3.25e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.72e-15;33!CL:0002057;7.72e-15;33!CL:0000576;1.03e-13;48!CL:0000473;1.52e-13;39!CL:0000234;1.52e-13;39!CL:0000766;6.47e-13;69!CL:0000738;3.56e-09;136!CL:0002087;5.50e-09;104!CL:0000763;1.77e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.02e-39,136;CL:0000037,4.73e-36,168;CL:0002032,1.71e-33,161;CL:0000837,1.71e-33,161;CL:0000988,4.98e-33,177;CL:0002031,9.14e-33,120;CL:0002087,5.02e-32,115;CL:0000766,1.61e-30,72;CL:0000557,1.55e-27,67;CL:0000839,2.39e-25,66;CL:0000763,7.65e-25,108;CL:0000049,7.65e-25,108;CL:0002009,4.36e-24,61;CL:0002194,4.37e-24,59;CL:0000576,4.37e-24,59;CL:0000040,4.37e-24,59;CL:0000559,4.37e-24,59;CL:0000473,3.73e-20,48;CL:0000234,3.73e-20,48;CL:0000860,4.96e-19,42;CL:0002057,4.96e-19,42;CL:0000838,1.50e-08,52;CL:0000542,3.25e-08,53;CL:0000051,3.25e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.65e-14;42!CL:0000049;6.27e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.15e-29!102;UBERON:0003061!9.15e-29!102;UBERON:0002193!8.77e-25!112;UBERON:0007023!6.08e-23!115;UBERON:0002371!4.89e-21!80;UBERON:0001474!3.03e-20!86;UBERON:0004765!1.35e-15!101;UBERON:0001434!1.35e-15!101;UBERON:0002405!1.02e-12!115;UBERON:0001049!3.53e-12!57;UBERON:0005068!3.53e-12!57;UBERON:0006241!3.53e-12!57;UBERON:0007135!3.53e-12!57;UBERON:0003080!6.21e-11!42;UBERON:0002780!1.04e-10!41;UBERON:0001890!1.04e-10!41;UBERON:0006240!1.04e-10!41;UBERON:0001017!6.36e-10!82;UBERON:0001893!9.35e-10!34;UBERON:0002020!1.17e-09!34;UBERON:0003528!1.17e-09!34;UBERON:0002616!1.50e-09!59;UBERON:0001869!1.57e-09!32;UBERON:0002791!2.78e-09!33;UBERON:0005743!3.20e-09!86;UBERON:0000955!6.24e-09!69;UBERON:0006238!6.24e-09!69;UBERON:0002619!7.10e-09!22;UBERON:0000073!1.13e-08!94;UBERON:0001016!1.13e-08!94;UBERON:0001950!1.15e-08!20;UBERON:0000956!4.16e-08!25;UBERON:0000203!4.16e-08!25;UBERON:0000178!1.34e-07!15;UBERON:0000179!1.34e-07!15;UBERON:0000463!1.34e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.62e-09;22!UBERON:0001950;1.16e-08;20!UBERON:0001869;1.47e-08;32!UBERON:0001893;2.27e-08;34!UBERON:0003528;3.03e-08;34!UBERON:0002020;3.03e-08;34!UBERON:0002791;3.49e-08;32!UBERON:0002780;3.55e-08;41!UBERON:0001890;3.55e-08;41!UBERON:0000956;4.57e-08;25!UBERON:0000203;4.57e-08;25!UBERON:0000178;1.60e-07;15!UBERON:0000179;1.60e-07;15!UBERON:0000463;1.60e-07;15!UBERON:0000073;3.93e-07;53!UBERON:0002616;3.93e-07;53!UBERON:0007023;5.45e-07;114 | |||
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| ||
|short_description=p1@FAM13B | |short_description=p1@FAM13B | ||
}} | }} |
Latest revision as of 21:45, 24 September 2015
Short description: | p1@FAM13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM13B_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000420893, ENST00000425075_5end |
EntrezGene: | FAM13B |
HGNC: | 1335 |
UniProt: | G3V0H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.02e-39 | 136 |
hematopoietic stem cell | 4.73e-36 | 168 |
hematopoietic oligopotent progenitor cell | 1.71e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-33 | 161 |
hematopoietic cell | 4.98e-33 | 177 |
hematopoietic lineage restricted progenitor cell | 9.14e-33 | 120 |
nongranular leukocyte | 5.02e-32 | 115 |
myeloid leukocyte | 1.61e-30 | 72 |
granulocyte monocyte progenitor cell | 1.55e-27 | 67 |
myeloid lineage restricted progenitor cell | 2.39e-25 | 66 |
myeloid cell | 7.65e-25 | 108 |
common myeloid progenitor | 7.65e-25 | 108 |
macrophage dendritic cell progenitor | 4.36e-24 | 61 |
monopoietic cell | 4.37e-24 | 59 |
monocyte | 4.37e-24 | 59 |
monoblast | 4.37e-24 | 59 |
promonocyte | 4.37e-24 | 59 |
defensive cell | 3.73e-20 | 48 |
phagocyte | 3.73e-20 | 48 |
classical monocyte | 4.96e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.96e-19 | 42 |
lymphoid lineage restricted progenitor cell | 1.50e-08 | 52 |
lymphocyte | 3.25e-08 | 53 |
common lymphoid progenitor | 3.25e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.91e-30 | 98 |
blood island | 6.91e-30 | 98 |
hemolymphoid system | 1.16e-25 | 108 |
adult organism | 1.68e-22 | 114 |
bone marrow | 4.19e-22 | 76 |
bone element | 3.39e-21 | 82 |
immune system | 1.87e-19 | 93 |
skeletal element | 1.28e-15 | 90 |
skeletal system | 1.86e-14 | 100 |
neural tube | 5.94e-12 | 56 |
neural rod | 5.94e-12 | 56 |
future spinal cord | 5.94e-12 | 56 |
neural keel | 5.94e-12 | 56 |
regional part of nervous system | 1.72e-11 | 53 |
regional part of brain | 1.72e-11 | 53 |
regional part of forebrain | 1.04e-10 | 41 |
forebrain | 1.04e-10 | 41 |
anterior neural tube | 1.04e-10 | 41 |
future forebrain | 1.04e-10 | 41 |
telencephalon | 9.35e-10 | 34 |
central nervous system | 1.03e-09 | 81 |
brain grey matter | 1.17e-09 | 34 |
gray matter | 1.17e-09 | 34 |
cerebral hemisphere | 1.57e-09 | 32 |
regional part of telencephalon | 4.34e-09 | 32 |
nervous system | 4.34e-09 | 89 |
regional part of cerebral cortex | 7.10e-09 | 22 |
brain | 1.00e-08 | 68 |
future brain | 1.00e-08 | 68 |
neocortex | 1.15e-08 | 20 |
cerebral cortex | 4.16e-08 | 25 |
pallium | 4.16e-08 | 25 |
blood | 1.34e-07 | 15 |
haemolymphatic fluid | 1.34e-07 | 15 |
organism substance | 1.34e-07 | 15 |