FFCP PHASE1:Hg19::chr8:102381049..102381068,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:102381049..102381068,+
|short_description=p2@NACAP1
|description=CAGE_peak_2_at_NACAP1_5end
|association_with_transcript=-52bp_to_NR_002182,uc003ykc.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83955 | |EntrezGene=83955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=24688 | |HGNC=24688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_NR_002182,uc003ykc.1_5end | |||
|cluster_id=chr8:102381049..102381068,+ | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_2_at_NACAP1_5end | |||
|id=chr8:102381049..102381068,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.63e-19!42;CL:0000860!1.09e-17!45;CL:0000839!5.10e-12!70;CL:0000557!1.71e-11!71;CL:0000763!3.80e-11!112;CL:0000049!3.80e-11!112;CL:0002031!5.03e-11!124;CL:0002009!7.44e-11!65;CL:0002032!1.04e-10!165;CL:0000837!1.04e-10!165;CL:0000037!1.40e-10!172;CL:0000566!1.40e-10!172;CL:0000738!5.18e-10!140;CL:0002194!5.95e-10!63;CL:0000576!5.95e-10!63;CL:0000040!5.95e-10!63;CL:0000559!5.95e-10!63;CL:0000766!7.03e-10!76;CL:0000988!2.89e-09!182;CL:0002087!8.71e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.88e-28;33!CL:0002057;6.88e-28;33!CL:0000473;4.91e-21;39!CL:0000234;4.91e-21;39!CL:0000576;1.08e-17;48!CL:0000766;6.11e-13;69!CL:0000197;6.47e-07;6!CL:0000098;6.47e-07;6!CL:0002167;6.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.56e-34,42;CL:0002057,4.56e-34,42;CL:0000473,1.88e-31,48;CL:0000234,1.88e-31,48;CL:0000839,1.26e-26,66;CL:0000557,6.91e-26,67;CL:0002009,4.60e-24,61;CL:0000766,9.54e-24,72;CL:0002194,2.78e-22,59;CL:0000576,2.78e-22,59;CL:0000040,2.78e-22,59;CL:0000559,2.78e-22,59;CL:0000763,3.43e-21,108;CL:0000049,3.43e-21,108;CL:0000738,5.53e-19,136;CL:0002031,6.25e-19,120;CL:0000037,4.63e-17,168;CL:0002032,2.32e-16,161;CL:0000837,2.32e-16,161;CL:0000988,4.03e-15,177;CL:0002087,2.97e-13,115;CL:0000034,3.09e-07,441;CL:0000197,5.87e-07,6;CL:0000098,5.87e-07,6;CL:0002167,5.87e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-24;42!CL:0000049;1.14e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.30e-09!80;UBERON:0001474!2.81e-08!86;UBERON:0004765!3.00e-08!101;UBERON:0001434!3.00e-08!101;UBERON:0001737!5.06e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.01e-12;9!UBERON:0001557;1.01e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.61e-23,76;UBERON:0001474,2.89e-21,82;UBERON:0004765,3.06e-21,90;UBERON:0002405,7.03e-19,93;UBERON:0001434,1.77e-17,100;UBERON:0002390,2.40e-15,98;UBERON:0003061,2.40e-15,98;UBERON:0002193,4.21e-14,108;UBERON:0001737,1.02e-12,9;UBERON:0002204,2.69e-10,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0.331397375727916,9.41255205032485,3.01347264011988,8.76372108464848,5.85519358548608,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.328402357799783,0.314843125254717,2.36018566109342,1.53531759238885,4.18003532953405,0,0.30120591877825,0,0,0,2.05520307534393,0,0,0,0,0,0,4.21654892460738,3.77875943688809,3.63876091781724,2.09186133215116,3.70051099219643,6.19412741790207,3.16461631554365,4.09857130446561,7.33094912654614,1.72372840368309,9.68227025375739,14.8969135253776,3.01187743268168,4.91231070104122,4.94391665779186,3.67300670845083,7.38136762275015,5.11469700639233,1.64925650093358,4.3882004676759,3.83602275479425,3.77272010217159,4.53908179752912,3.73693349397345,2.51248665256743,9.90817544998383,7.38442071997397,2.42159801053347,8.47038562771399,7.59509729858123,6.5489138756702,7.22854619881148,6.49941801075965,2.92054440980887,4.35512989240368,4.50031642751824,7.12531859353121,16.5100842075245,10.4118567645841,1.75996244461323,2.18455444504853,4.44754626931777,0,1.20118796110804,0.574752439954483,1.32208974556972,1.90810750907073,0,0,0,7.93027971474155,10.6496626966492,3.68737718685108,0.196709770113833,0,0,2.34061093546949,2.93330039970231,3.78758244587787,5.84480185223734,2.22820913770347,7.36514768687093,4.87374568083967,2.16643091012012,1.40900451698243,1.30059347559878,1.47994114143309,1.10540007114339,2.31842468588042,2.66915813691709,6.1534390460634,5.22677619024884,1.47302145506836,2.29932296161153,2.40539211837841,3.54227568827304,1.27426165729639,0.651083453856419,2.85135613334512,3.61380285786655,5.11946444617674,0,0.473554504088034,0.821127996921047,0,0,0.289648807765598,0,0,6.26526553033299,0,0,0.289693037921647,0,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,4.0039643754609,9.28643753323912,0.198762407366705,0,0,0,0.838998872419812,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.12663051166458,4.10468460520978,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,2.02531598689519,0.194874010322397,0,0.184099797284599,7.11242650002772,0,0.10075209822764,0.339121184620975,0.386521706326594,0,0,0.243947412259191,0,0.348581828608555,0.10366105501537,8.32658807889574,6.56959246336494,0,0,0,0,0,9.46454400318751,8.42923450390509,11.5685294344071,6.83822630940842,7.40790109914181,10.2026366217772,10.651673344653,9.22240886089127,16.1593805917484,0,0,0,0,0,0,0,0,0,7.20584803253807,0.329250856225877,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,3.4779121492523,5.51820862908362,0.144366447761074,3.70388410061289,3.04406643575357,0,0,0,0.234004265139238,0,1.87467667973554,5.03946384596579,8.79005602902796,0,0.290633938513962,0,0,1.58487181223807,3.93923419527467,5.76479813667846,4.92345490362882,2.47641787739459,0,0,0,0,1.8020583470635,3.42991719156694,0,0,0.07333828582095,0.258543431515556,0,10.988935783228,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,4.35766729300147,0,3.64871341923571,3.51579964002488,0,0.239624855491583,0,5.70547620162874,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,3.18969375826582,0,0,0,0,0.500170521059677,0,3.53550464602372,5.17444067511769,3.94256037584837,2.6942525448324,0,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,2.76231551918512,0,0.128139149255701,0,0,1.48418066444991,0,0,0.246381468041427,0,0.464841513839837,0,0,0.460404944679482,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,8.33187531254551,6.01301537357271,0.256450125116389,0,0.976135183992909,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0,0.178064071293475,0.165284915360978,0.192190067365106,1.14851441245126,0.10115778085555,0.929691098594572,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,6.55894752046633,0.202910376962704,0.30982349809975,0,7.17056761020257,7.76167424003657,0.35667105148125,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0.185803175125719,0.28853842595289,0,0.159426272728822,0,0.766021480529467,0,9.73865820823666,0,0,0.783399478865116,7.51903431270201,5.41733688965131,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0,0.19538809540204,0,0,9.46594874665941,0,0,0,0,0,0.222886768554957,0,3.81991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| ||
|short_description=p2@NACAP1 | |||
}} | }} |
Latest revision as of 21:31, 24 September 2015
Short description: | p2@NACAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NACAP1_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | -52bp_to_NR_002182, uc003ykc.1_5end |
EntrezGene: | NACAP1 |
HGNC: | 24688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.56e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.56e-34 | 42 |
defensive cell | 1.88e-31 | 48 |
phagocyte | 1.88e-31 | 48 |
myeloid lineage restricted progenitor cell | 1.26e-26 | 66 |
granulocyte monocyte progenitor cell | 6.91e-26 | 67 |
macrophage dendritic cell progenitor | 4.60e-24 | 61 |
myeloid leukocyte | 9.54e-24 | 72 |
monopoietic cell | 2.78e-22 | 59 |
monocyte | 2.78e-22 | 59 |
monoblast | 2.78e-22 | 59 |
promonocyte | 2.78e-22 | 59 |
myeloid cell | 3.43e-21 | 108 |
common myeloid progenitor | 3.43e-21 | 108 |
leukocyte | 5.53e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 6.25e-19 | 120 |
hematopoietic stem cell | 4.63e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.32e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-16 | 161 |
hematopoietic cell | 4.03e-15 | 177 |
nongranular leukocyte | 2.97e-13 | 115 |
stem cell | 3.09e-07 | 441 |
receptor cell | 5.87e-07 | 6 |
sensory epithelial cell | 5.87e-07 | 6 |
olfactory epithelial cell | 5.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.61e-23 | 76 |
bone element | 2.89e-21 | 82 |
skeletal element | 3.06e-21 | 90 |
immune system | 7.03e-19 | 93 |
skeletal system | 1.77e-17 | 100 |
hematopoietic system | 2.40e-15 | 98 |
blood island | 2.40e-15 | 98 |
hemolymphoid system | 4.21e-14 | 108 |
larynx | 1.02e-12 | 9 |
musculoskeletal system | 2.69e-10 | 167 |