FFCP PHASE1:Hg19::chr17:42466993..42467000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3674 | |EntrezGene=3674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6138 | |HGNC=6138 | ||
|TSSclassifier=strong | |||
|UniProt=P08514 | |UniProt=P08514 | ||
|association_with_transcript=-120bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | |association_with_transcript=-120bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | ||
|cluster_id=chr17:42466993..42467000,- | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_7_at_ITGA2B_5end | |description=CAGE_peak_7_at_ITGA2B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000763!3.63e-34!112;CL:0000049!3.63e-34!112;CL:0002274!1.89e-30!5;CL:0000457!1.89e-30!5;CL:0002191!1.89e-30!5;CL:0000097!1.89e-30!5;CL:0000831!1.89e-30!5;CL:0002028!1.89e-30!5;CL:0002032!1.36e-23!165;CL:0000837!1.36e-23!165;CL:0000037!2.02e-22!172;CL:0000566!2.02e-22!172;CL:0000988!6.65e-21!182;CL:0000163!7.28e-17!9;CL:0000764!4.07e-13!2;CL:0000765!4.07e-13!2;CL:0000050!4.07e-13!2;CL:0000038!4.07e-13!2;CL:0000558!4.07e-13!2;CL:0000547!4.07e-13!2;CL:0000549!4.07e-13!2;CL:0000550!4.07e-13!2;CL:0000552!4.07e-13!2;CL:0000134!5.54e-08!358;CL:0002320!1.00e-07!365;CL:0000219!8.18e-07!390;CL:0000839!9.87e-07!70 | |ontology_enrichment_celltype=CL:0000763!3.63e-34!112;CL:0000049!3.63e-34!112;CL:0002274!1.89e-30!5;CL:0000457!1.89e-30!5;CL:0002191!1.89e-30!5;CL:0000097!1.89e-30!5;CL:0000831!1.89e-30!5;CL:0002028!1.89e-30!5;CL:0002032!1.36e-23!165;CL:0000837!1.36e-23!165;CL:0000037!2.02e-22!172;CL:0000566!2.02e-22!172;CL:0000988!6.65e-21!182;CL:0000163!7.28e-17!9;CL:0000764!4.07e-13!2;CL:0000765!4.07e-13!2;CL:0000050!4.07e-13!2;CL:0000038!4.07e-13!2;CL:0000558!4.07e-13!2;CL:0000547!4.07e-13!2;CL:0000549!4.07e-13!2;CL:0000550!4.07e-13!2;CL:0000552!4.07e-13!2;CL:0000134!5.54e-08!358;CL:0002320!1.00e-07!365;CL:0000219!8.18e-07!390;CL:0000839!9.87e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.30e-12;5!CL:0000763;2.90e-09;100!CL:0000163;2.12e-07;9 | |ontology_enrichment_celltype_v019=CL:0000097;1.30e-12;5!CL:0000763;2.90e-09;100!CL:0000163;2.12e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.51e-17,108;CL:0000049,1.51e-17,108;CL:0002032,1.47e-13,161;CL:0000837,1.47e-13,161;CL:0000037,6.11e-13,168;CL:0000097,1.26e-12,5;CL:0002028,1.26e-12,5;CL:0000988,3.22e-12,177;CL:0000163,2.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;3.96e-07;108 | |ontology_enrichment_development_v019=CL:0000049;3.96e-07;108 | ||
|ontology_enrichment_disease=DOID:8692!9.34e-54!31;DOID:1240!1.92e-47!39;DOID:2531!2.13e-35!51;DOID:0060083!2.13e-35!51;DOID:1036!8.91e-27!8;DOID:0050686!1.03e-10!137;DOID:8552!8.54e-08!1;DOID:9119!9.71e-08!1 | |ontology_enrichment_disease=DOID:8692!9.34e-54!31;DOID:1240!1.92e-47!39;DOID:2531!2.13e-35!51;DOID:0060083!2.13e-35!51;DOID:1036!8.91e-27!8;DOID:0050686!1.03e-10!137;DOID:8552!8.54e-08!1;DOID:9119!9.71e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.11e-43;31!DOID:1240;6.74e-31;39!DOID:2531;3.61e-23;51!DOID:0060083;3.61e-23;51!DOID:9119;1.24e-15;1!DOID:8552;1.24e-15;1!DOID:1036;4.42e-08;8 | |ontology_enrichment_disease_v019=DOID:8692;3.11e-43;31!DOID:1240;6.74e-31;39!DOID:2531;3.61e-23;51!DOID:0060083;3.61e-23;51!DOID:9119;1.24e-15;1!DOID:8552;1.24e-15;1!DOID:1036;4.42e-08;8 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.05e-44,31;DOID:1240,1.19e-42,39;DOID:2531,2.14e-32,51;DOID:0060083,2.14e-32,51;DOID:8552,9.99e-16,1;DOID:9119,1.34e-15,1;DOID:0050686,2.80e-11,137;DOID:1036,4.34e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.26e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!2.26e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@ITGA2B | |short_description=p7@ITGA2B | ||
}} | }} |
Latest revision as of 21:31, 24 September 2015
Short description: | p7@ITGA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ITGA2B_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -120bp_to_ENST00000262407, ENST00000353281, NM_000419, uc002igt.1_5end |
EntrezGene: | ITGA2B |
HGNC: | 6138 |
UniProt: | P08514 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.51e-17 | 108 |
common myeloid progenitor | 1.51e-17 | 108 |
hematopoietic oligopotent progenitor cell | 1.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-13 | 161 |
hematopoietic stem cell | 6.11e-13 | 168 |
mast cell | 1.26e-12 | 5 |
basophil mast progenitor cell | 1.26e-12 | 5 |
hematopoietic cell | 3.22e-12 | 177 |
endocrine cell | 2.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.05e-44 | 31 |
leukemia | 1.19e-42 | 39 |
hematologic cancer | 2.14e-32 | 51 |
immune system cancer | 2.14e-32 | 51 |
chronic myeloid leukemia | 9.99e-16 | 1 |
acute myeloid leukemia | 1.34e-15 | 1 |
organ system cancer | 2.80e-11 | 137 |
chronic leukemia | 4.34e-08 | 8 |