FFCP PHASE1:Hg19::chr9:124262316..124262321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2681 | |EntrezGene=2681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4253 | |HGNC=4253 | ||
|TSSclassifier=strong | |||
|UniProt=Q4G0N0 | |UniProt=Q4G0N0 | ||
|association_with_transcript=-10bp_to_ENST00000481799,NR_003191,NR_045211,uc004blj.1,uc004blk.1,uc004bll.1,uc004blm.1_5end | |association_with_transcript=-10bp_to_ENST00000481799,NR_003191,NR_045211,uc004blj.1,uc004blk.1,uc004bll.1,uc004blm.1_5end | ||
|cluster_id=chr9:124262316..124262321,- | |||
|description=CAGE_peak_11_at_GGTA1P_5end | |description=CAGE_peak_11_at_GGTA1P_5end | ||
|id=chr9:124262316..124262321,- | |id=chr9:124262316..124262321,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000840;8.50e-28;5!CL:0000990;8.66e-19;8!CL:0000451;1.68e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.10e-28,5;CL:0001029,4.10e-28,5;CL:0000990,5.33e-19,8;CL:0000451,1.13e-15,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.47e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.55e-49!115;UBERON:0001893!1.27e-12!34;UBERON:0002780!1.61e-12!41;UBERON:0001890!1.61e-12!41;UBERON:0006240!1.61e-12!41;UBERON:0003080!4.20e-12!42;UBERON:0002791!1.64e-11!33;UBERON:0002619!4.74e-11!22;UBERON:0001049!1.01e-10!57;UBERON:0005068!1.01e-10!57;UBERON:0006241!1.01e-10!57;UBERON:0007135!1.01e-10!57;UBERON:0001869!1.45e-10!32;UBERON:0001950!2.64e-10!20;UBERON:0002616!3.61e-10!59;UBERON:0002020!1.30e-09!34;UBERON:0003528!1.30e-09!34;UBERON:0000956!2.09e-09!25;UBERON:0000203!2.09e-09!25;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0003056!9.53e-08!61;UBERON:0000153!2.29e-07!129;UBERON:0007811!2.29e-07!129;UBERON:0003075!2.55e-07!86;UBERON:0007284!2.55e-07!86;UBERON:0005743!2.74e-07!86;UBERON:0001017!3.80e-07!82;UBERON:0000062!4.65e-07!511;UBERON:0006947!9.01e-07!3;UBERON:0004054!9.01e-07!3;UBERON:0002346!9.79e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!5.55e-49!115;UBERON:0001893!1.27e-12!34;UBERON:0002780!1.61e-12!41;UBERON:0001890!1.61e-12!41;UBERON:0006240!1.61e-12!41;UBERON:0003080!4.20e-12!42;UBERON:0002791!1.64e-11!33;UBERON:0002619!4.74e-11!22;UBERON:0001049!1.01e-10!57;UBERON:0005068!1.01e-10!57;UBERON:0006241!1.01e-10!57;UBERON:0007135!1.01e-10!57;UBERON:0001869!1.45e-10!32;UBERON:0001950!2.64e-10!20;UBERON:0002616!3.61e-10!59;UBERON:0002020!1.30e-09!34;UBERON:0003528!1.30e-09!34;UBERON:0000956!2.09e-09!25;UBERON:0000203!2.09e-09!25;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0003056!9.53e-08!61;UBERON:0000153!2.29e-07!129;UBERON:0007811!2.29e-07!129;UBERON:0003075!2.55e-07!86;UBERON:0007284!2.55e-07!86;UBERON:0005743!2.74e-07!86;UBERON:0001017!3.80e-07!82;UBERON:0000062!4.65e-07!511;UBERON:0006947!9.01e-07!3;UBERON:0004054!9.01e-07!3;UBERON:0002346!9.79e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.47e-19;1!UBERON:0002171;2.47e-19;1!UBERON:0006518;2.47e-19;1!UBERON:0008949;2.47e-19;1!UBERON:0000101;2.47e-19;1!UBERON:0002167;2.47e-19;1!UBERON:0000341;2.37e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.88e-19,1;UBERON:0002171,2.25e-19,1;UBERON:0006518,2.25e-19,1;UBERON:0008949,2.25e-19,1;UBERON:0000101,2.25e-19,1;UBERON:0002167,2.25e-19,1;UBERON:0000341,2.72e-10,2 | |||
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| ||
|short_description=p11@GGTA1P | |short_description=p11@GGTA1P | ||
}} | }} |
Latest revision as of 21:26, 24 September 2015
Short description: | p11@GGTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GGTA1P_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000481799, NR_003191, NR_045211, uc004blj.1, uc004blk.1, uc004bll.1, uc004blm.1_5end |
EntrezGene: | GGTA1P |
HGNC: | 4253 |
UniProt: | Q4G0N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.10e-28 | 5 |
common dendritic progenitor | 4.10e-28 | 5 |
conventional dendritic cell | 5.33e-19 | 8 |
dendritic cell | 1.13e-15 | 10 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.88e-19 | 1 |
lower lobe of right lung | 2.25e-19 | 1 |
right lung lobe | 2.25e-19 | 1 |
lower lobe of lung | 2.25e-19 | 1 |
lobe of lung | 2.25e-19 | 1 |
right lung | 2.25e-19 | 1 |
throat | 2.72e-10 | 2 |