FFCP PHASE1:Hg19::chr6:134499461..134499475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6446 | |EntrezGene=6446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |HGNC=10810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-418bp_to_ENST00000528577_5end | |association_with_transcript=-418bp_to_ENST00000528577_5end | ||
|cluster_id=chr6:134499461..134499475,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_21_at_SGK1_5end | |description=CAGE_peak_21_at_SGK1_5end | ||
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|ontology_enrichment_celltype=CL:0000860!2.27e-46!45;CL:0000766!1.94e-44!76;CL:0002057!7.79e-43!42;CL:0000738!2.52e-36!140;CL:0000557!7.89e-36!71;CL:0000839!9.08e-35!70;CL:0002009!2.71e-33!65;CL:0002194!5.49e-33!63;CL:0000576!5.49e-33!63;CL:0000040!5.49e-33!63;CL:0000559!5.49e-33!63;CL:0002031!2.01e-27!124;CL:0002087!2.35e-27!119;CL:0000763!1.70e-26!112;CL:0000049!1.70e-26!112;CL:0000037!4.32e-26!172;CL:0000566!4.32e-26!172;CL:0002032!1.12e-23!165;CL:0000837!1.12e-23!165;CL:0000988!2.18e-23!182;CL:0000134!4.20e-15!358;CL:0000219!2.06e-14!390;CL:0002320!2.82e-14!365;CL:0000048!2.56e-13!430;CL:0000723!1.02e-12!436;CL:0000034!1.71e-12!444;CL:0000094!8.35e-10!8;CL:0000144!1.90e-08!625;CL:0002393!5.27e-08!9;CL:0002397!5.27e-08!9;CL:0002371!7.97e-08!591 | |ontology_enrichment_celltype=CL:0000860!2.27e-46!45;CL:0000766!1.94e-44!76;CL:0002057!7.79e-43!42;CL:0000738!2.52e-36!140;CL:0000557!7.89e-36!71;CL:0000839!9.08e-35!70;CL:0002009!2.71e-33!65;CL:0002194!5.49e-33!63;CL:0000576!5.49e-33!63;CL:0000040!5.49e-33!63;CL:0000559!5.49e-33!63;CL:0002031!2.01e-27!124;CL:0002087!2.35e-27!119;CL:0000763!1.70e-26!112;CL:0000049!1.70e-26!112;CL:0000037!4.32e-26!172;CL:0000566!4.32e-26!172;CL:0002032!1.12e-23!165;CL:0000837!1.12e-23!165;CL:0000988!2.18e-23!182;CL:0000134!4.20e-15!358;CL:0000219!2.06e-14!390;CL:0002320!2.82e-14!365;CL:0000048!2.56e-13!430;CL:0000723!1.02e-12!436;CL:0000034!1.71e-12!444;CL:0000094!8.35e-10!8;CL:0000144!1.90e-08!625;CL:0002393!5.27e-08!9;CL:0002397!5.27e-08!9;CL:0002371!7.97e-08!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.36e-64;33!CL:0002057;8.36e-64;33!CL:0000473;1.88e-46;39!CL:0000234;1.88e-46;39!CL:0000576;2.55e-46;48!CL:0000766;5.38e-39;69!CL:0000094;8.70e-29;8!CL:0002393;1.85e-28;6!CL:0002397;1.85e-28;6!CL:0000081;1.10e-20;11!CL:0000767;2.31e-15;3!CL:0000763;3.42e-15;100!CL:0000226;6.78e-15;3!CL:0000842;6.78e-15;3!CL:0002087;1.12e-13;104!CL:0000771;6.71e-11;2!CL:0000738;9.49e-11;136!CL:0000988;2.32e-07;177!CL:0000775;3.95e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;8.36e-64;33!CL:0002057;8.36e-64;33!CL:0000473;1.88e-46;39!CL:0000234;1.88e-46;39!CL:0000576;2.55e-46;48!CL:0000766;5.38e-39;69!CL:0000094;8.70e-29;8!CL:0002393;1.85e-28;6!CL:0002397;1.85e-28;6!CL:0000081;1.10e-20;11!CL:0000767;2.31e-15;3!CL:0000763;3.42e-15;100!CL:0000226;6.78e-15;3!CL:0000842;6.78e-15;3!CL:0002087;1.12e-13;104!CL:0000771;6.71e-11;2!CL:0000738;9.49e-11;136!CL:0000988;2.32e-07;177!CL:0000775;3.95e-07;3 | ||
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|ontology_enrichment_development_v019=CL:0002057;5.05e-66;42!CL:0000049;2.51e-12;108 | |ontology_enrichment_development_v019=CL:0002057;5.05e-66;42!CL:0000049;2.51e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.75e-31!102;UBERON:0003061!1.75e-31!102;UBERON:0002371!2.07e-31!80;UBERON:0001474!4.67e-28!86;UBERON:0002193!5.41e-28!112;UBERON:0004765!1.46e-23!101;UBERON:0001434!1.46e-23!101;UBERON:0002405!1.50e-19!115;UBERON:0003081!3.19e-19!216;UBERON:0002204!6.10e-16!167;UBERON:0002384!3.32e-14!375 | |ontology_enrichment_uberon=UBERON:0002390!1.75e-31!102;UBERON:0003061!1.75e-31!102;UBERON:0002371!2.07e-31!80;UBERON:0001474!4.67e-28!86;UBERON:0002193!5.41e-28!112;UBERON:0004765!1.46e-23!101;UBERON:0001434!1.46e-23!101;UBERON:0002405!1.50e-19!115;UBERON:0003081!3.19e-19!216;UBERON:0002204!6.10e-16!167;UBERON:0002384!3.32e-14!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-48,76;UBERON:0002390,6.19e-45,98;UBERON:0003061,6.19e-45,98;UBERON:0001474,1.41e-44,82;UBERON:0002193,3.69e-40,108;UBERON:0004765,4.54e-40,90;UBERON:0002405,1.41e-38,93;UBERON:0001434,1.94e-35,100;UBERON:0003081,5.92e-21,203;UBERON:0002204,1.24e-18,167;UBERON:0002384,1.38e-13,371;UBERON:0000926,6.88e-11,315;UBERON:0004120,6.88e-11,315;UBERON:0006603,6.88e-11,315 | |||
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|short_description=p21@SGK1 | |short_description=p21@SGK1 | ||
}} | }} |
Latest revision as of 21:24, 24 September 2015
Short description: | p21@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SGK1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -418bp_to_ENST00000528577_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-48 | 76 |
hematopoietic system | 6.19e-45 | 98 |
blood island | 6.19e-45 | 98 |
bone element | 1.41e-44 | 82 |
hemolymphoid system | 3.69e-40 | 108 |
skeletal element | 4.54e-40 | 90 |
immune system | 1.41e-38 | 93 |
skeletal system | 1.94e-35 | 100 |
lateral plate mesoderm | 5.92e-21 | 203 |
musculoskeletal system | 1.24e-18 | 167 |
connective tissue | 1.38e-13 | 371 |
mesoderm | 6.88e-11 | 315 |
mesoderm-derived structure | 6.88e-11 | 315 |
presumptive mesoderm | 6.88e-11 | 315 |