FFCP PHASE1:Hg19::chr6:134495992..134496010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6446 | |EntrezGene=6446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |HGNC=10810 | ||
|TSSclassifier=strong | |||
|UniProt=E9PR89 | |UniProt=E9PR89 | ||
|association_with_transcript=0bp_to_ENST00000367857,ENST00000472859,ENST00000474427,ENST00000475719,ENST00000530421,ENST00000532856,ENST00000534658,uc011ect.1_5end | |association_with_transcript=0bp_to_ENST00000367857,ENST00000472859,ENST00000474427,ENST00000475719,ENST00000530421,ENST00000532856,ENST00000534658,uc011ect.1_5end | ||
|cluster_id=chr6:134495992..134496010,- | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_1_at_SGK1_5end | |description=CAGE_peak_1_at_SGK1_5end | ||
|id=chr6:134495992..134496010,- | |id=chr6:134495992..134496010,- | ||
|ontology_enrichment_celltype=CL:0000766!2.33e-32!76;CL:0000557!1.11e-27!71;CL:0002009!3.30e-27!65;CL:0002194!7.60e-26!63;CL:0000576!7.60e-26!63;CL:0000040!7.60e-26!63;CL:0000559!7.60e-26!63;CL:0000860!9.73e-26!45;CL:0000839!1.78e-25!70;CL:0002057!2.98e-24!42;CL:0000763!1.06e-08!112;CL:0000049!1.06e-08!112;CL:0000738!2.61e-07!140;CL:0000235!5.93e-07!10 | |ontology_enrichment_celltype=CL:0000766!2.33e-32!76;CL:0000557!1.11e-27!71;CL:0002009!3.30e-27!65;CL:0002194!7.60e-26!63;CL:0000576!7.60e-26!63;CL:0000040!7.60e-26!63;CL:0000559!7.60e-26!63;CL:0000860!9.73e-26!45;CL:0000839!1.78e-25!70;CL:0002057!2.98e-24!42;CL:0000763!1.06e-08!112;CL:0000049!1.06e-08!112;CL:0000738!2.61e-07!140;CL:0000235!5.93e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.14e-19;39!CL:0000234;3.14e-19;39!CL:0000860;3.62e-19;33!CL:0002057;3.62e-19;33!CL:0000576;2.33e-14;48!CL:0000766;8.68e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.96e-30,72;CL:0000473,4.14e-28,48;CL:0000234,4.14e-28,48;CL:0000557,8.47e-26,67;CL:0002009,2.49e-25,61;CL:0000860,2.98e-24,42;CL:0002057,2.98e-24,42;CL:0002194,5.55e-24,59;CL:0000576,5.55e-24,59;CL:0000040,5.55e-24,59;CL:0000559,5.55e-24,59;CL:0000839,1.28e-23,66;CL:0000763,1.43e-07,108;CL:0000049,1.43e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.74e-25!80;UBERON:0003081!7.00e-25!216;UBERON:0002390!2.03e-22!102;UBERON:0003061!2.03e-22!102;UBERON:0002193!1.15e-21!112;UBERON:0001474!1.38e-21!86;UBERON:0002405!4.88e-20!115;UBERON:0004765!1.27e-17!101;UBERON:0001434!1.27e-17!101;UBERON:0002204!1.53e-16!167;UBERON:0000467!8.47e-16!625;UBERON:0000480!1.11e-15!626;UBERON:0000923!4.16e-15!604;UBERON:0005291!4.16e-15!604;UBERON:0006598!4.16e-15!604;UBERON:0002532!4.16e-15!604;UBERON:0002050!6.04e-15!605;UBERON:0005423!6.04e-15!605;UBERON:0000468!6.32e-15!659;UBERON:0000922!9.63e-14!612;UBERON:0000062!2.73e-11!511;UBERON:0000926!2.93e-11!448;UBERON:0004120!2.93e-11!448;UBERON:0006603!2.93e-11!448;UBERON:0004535!1.02e-07!110;UBERON:0001637!3.59e-07!42;UBERON:0003509!3.59e-07!42;UBERON:0004572!3.59e-07!42;UBERON:0001009!3.89e-07!113 | |ontology_enrichment_uberon=UBERON:0002371!1.74e-25!80;UBERON:0003081!7.00e-25!216;UBERON:0002390!2.03e-22!102;UBERON:0003061!2.03e-22!102;UBERON:0002193!1.15e-21!112;UBERON:0001474!1.38e-21!86;UBERON:0002405!4.88e-20!115;UBERON:0004765!1.27e-17!101;UBERON:0001434!1.27e-17!101;UBERON:0002204!1.53e-16!167;UBERON:0000467!8.47e-16!625;UBERON:0000480!1.11e-15!626;UBERON:0000923!4.16e-15!604;UBERON:0005291!4.16e-15!604;UBERON:0006598!4.16e-15!604;UBERON:0002532!4.16e-15!604;UBERON:0002050!6.04e-15!605;UBERON:0005423!6.04e-15!605;UBERON:0000468!6.32e-15!659;UBERON:0000922!9.63e-14!612;UBERON:0000062!2.73e-11!511;UBERON:0000926!2.93e-11!448;UBERON:0004120!2.93e-11!448;UBERON:0006603!2.93e-11!448;UBERON:0004535!1.02e-07!110;UBERON:0001637!3.59e-07!42;UBERON:0003509!3.59e-07!42;UBERON:0004572!3.59e-07!42;UBERON:0001009!3.89e-07!113 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-23,76;UBERON:0003081,1.50e-23,203;UBERON:0002390,1.08e-20,98;UBERON:0003061,1.08e-20,98;UBERON:0002193,5.51e-20,108;UBERON:0001474,7.67e-20,82;UBERON:0002405,1.41e-19,93;UBERON:0004765,1.74e-17,90;UBERON:0001434,9.91e-15,100;UBERON:0000926,1.17e-14,315;UBERON:0004120,1.17e-14,315;UBERON:0006603,1.17e-14,315;UBERON:0005423,1.24e-14,581;UBERON:0002050,1.49e-14,564;UBERON:0000923,3.06e-14,560;UBERON:0010316,3.06e-14,560;UBERON:0005291,3.06e-14,560;UBERON:0006598,3.06e-14,560;UBERON:0010317,3.06e-14,560;UBERON:0002532,3.06e-14,560;UBERON:0000922,5.56e-14,592;UBERON:0002204,8.20e-14,167;UBERON:0004535,1.75e-07,109;UBERON:0001637,3.59e-07,42;UBERON:0003509,3.59e-07,42;UBERON:0004572,3.59e-07,42;UBERON:0001009,6.50e-07,112 | |||
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| ||
|short_description=p1@SGK1 | |short_description=p1@SGK1 | ||
}} | }} |
Latest revision as of 21:12, 24 September 2015
Short description: | p1@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGK1_5end |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | 0bp_to_ENST00000367857, ENST00000472859, ENST00000474427, ENST00000475719, ENST00000530421, ENST00000532856, ENST00000534658, uc011ect.1_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | E9PR89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.96e-30 | 72 |
defensive cell | 4.14e-28 | 48 |
phagocyte | 4.14e-28 | 48 |
granulocyte monocyte progenitor cell | 8.47e-26 | 67 |
macrophage dendritic cell progenitor | 2.49e-25 | 61 |
classical monocyte | 2.98e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-24 | 42 |
monopoietic cell | 5.55e-24 | 59 |
monocyte | 5.55e-24 | 59 |
monoblast | 5.55e-24 | 59 |
promonocyte | 5.55e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-23 | 66 |
myeloid cell | 1.43e-07 | 108 |
common myeloid progenitor | 1.43e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-23 | 76 |
lateral plate mesoderm | 1.50e-23 | 203 |
hematopoietic system | 1.08e-20 | 98 |
blood island | 1.08e-20 | 98 |
hemolymphoid system | 5.51e-20 | 108 |
bone element | 7.67e-20 | 82 |
immune system | 1.41e-19 | 93 |
skeletal element | 1.74e-17 | 90 |
skeletal system | 9.91e-15 | 100 |
mesoderm | 1.17e-14 | 315 |
mesoderm-derived structure | 1.17e-14 | 315 |
presumptive mesoderm | 1.17e-14 | 315 |
developing anatomical structure | 1.24e-14 | 581 |
embryonic structure | 1.49e-14 | 564 |
germ layer | 3.06e-14 | 560 |
germ layer / neural crest | 3.06e-14 | 560 |
embryonic tissue | 3.06e-14 | 560 |
presumptive structure | 3.06e-14 | 560 |
germ layer / neural crest derived structure | 3.06e-14 | 560 |
epiblast (generic) | 3.06e-14 | 560 |
embryo | 5.56e-14 | 592 |
musculoskeletal system | 8.20e-14 | 167 |
cardiovascular system | 1.75e-07 | 109 |
artery | 3.59e-07 | 42 |
arterial blood vessel | 3.59e-07 | 42 |
arterial system | 3.59e-07 | 42 |
circulatory system | 6.50e-07 | 112 |