FFCP PHASE1:Hg19::chr6:134495096..134495143,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:134495096..134495143,- to FFCP PHASE1:Hg19::chr6:134495096..134495143,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6446 | |EntrezGene=6446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |HGNC=10810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_ENST00000490149_5end | |||
|cluster_id=chr6:134495096..134495143,- | |||
|description=CAGE_peak_20_at_SGK1_5end | |||
|id=chr6:134495096..134495143,- | |||
|ontology_enrichment_celltype=CL:0002009!1.53e-23!65;CL:0000766!5.10e-23!76;CL:0000557!7.29e-23!71;CL:0000860!1.86e-22!45;CL:0002194!6.19e-22!63;CL:0000576!6.19e-22!63;CL:0000040!6.19e-22!63;CL:0000559!6.19e-22!63;CL:0000839!1.26e-21!70;CL:0002057!1.74e-20!42;CL:0002031!5.56e-11!124;CL:0000763!5.98e-11!112;CL:0000049!5.98e-11!112;CL:0000738!1.17e-10!140;CL:0002087!1.31e-09!119;CL:0000235!3.02e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.17e-33;39!CL:0000234;1.17e-33;39!CL:0000860;1.93e-29;33!CL:0002057;1.93e-29;33!CL:0000766;5.98e-17;69!CL:0000576;6.46e-16;48!CL:0000235;7.47e-13;6!CL:0001014;1.29e-10;2!CL:0001016;1.29e-10;2!CL:0000763;1.58e-07;100!CL:0000775;1.68e-07;3!CL:0002567;2.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.40e-40,48;CL:0000234,1.40e-40,48;CL:0002009,1.06e-36,61;CL:0000557,5.90e-33,67;CL:0002194,2.09e-31,59;CL:0000576,2.09e-31,59;CL:0000040,2.09e-31,59;CL:0000559,2.09e-31,59;CL:0000860,1.35e-30,42;CL:0002057,1.35e-30,42;CL:0000766,2.16e-30,72;CL:0000839,1.42e-27,66;CL:0000763,2.43e-22,108;CL:0000049,2.43e-22,108;CL:0000738,1.58e-16,136;CL:0002031,4.95e-16,120;CL:0002087,9.73e-14,115;CL:0002032,4.74e-13,161;CL:0000837,4.74e-13,161;CL:0000235,1.02e-12,6;CL:0000037,2.90e-12,168;CL:0000988,2.41e-11,177;CL:0001014,1.33e-10,2;CL:0001016,1.33e-10,2;CL:0000775,1.60e-07,3;CL:0002567,2.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.53e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.41e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.81e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.02e-21!80;UBERON:0001474!1.09e-18!86;UBERON:0004765!2.80e-16!101;UBERON:0001434!2.80e-16!101;UBERON:0002405!5.29e-16!115;UBERON:0002390!2.40e-15!102;UBERON:0003061!2.40e-15!102;UBERON:0002193!2.34e-14!112;UBERON:0003081!3.90e-08!216;UBERON:0002204!2.05e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.30e-31,76;UBERON:0001474,2.48e-28,82;UBERON:0004765,2.55e-25,90;UBERON:0002390,8.08e-25,98;UBERON:0003061,8.08e-25,98;UBERON:0002405,2.53e-24,93;UBERON:0001434,3.15e-22,100;UBERON:0002193,5.55e-22,108;UBERON:0002204,4.66e-11,167;UBERON:0003081,6.62e-11,203 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0,0.0774672005803016,0,0,0,2.00544447470142,1.30206522429511,0.447830948479849,0,0.257575567634187,1.74477886535478,1.13362783106643,0.727752183563449,2.32429036905685,2.87817521615278,2.47765096716083,1.43846196161075,1.0246428261164,1.41889337933151,3.44745680736619,2.5819387343353,1.35426486594342,0.941211697713023,0.818718450173537,0.898893937780338,0.918251677112708,0.641858054152187,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,1.24564449799115,1.50749199154046,2.60741459210101,1.73751075764093,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.300353785683013,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.797747763113191,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.926864265692532,1.72101972449288,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0.600182192168805,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,1.23108503043699,0,0.594524649154913,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0.207328115540772,0,0.37872730027914,2.15892840593375,2.29193055334967,3.51652341630141,0,0.308482478109971,0.600686115687835,0,0.224262168690721,0,0,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,1.74306691720059,0.299918973546171,4.86495122564762,2.00902836572851,4.21667878966063,0,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,5.9832291840805,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0.710246901252508,0,0,0.232420756919918,0,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0.638063562472921,0,0,0.62962469366128,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,0,0,0.571890581771475,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0,0,0,0,0.123084805461069,0.622079175323615,0,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.482385754501632,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,1.45668227720456,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0,0,0.51595809741485,0.967563312890852,0.877071805034227,0.410577285266046,0,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0,0,0.599428828746391,0,0,0.171594997861965,0.288109595976299,0,0.471388069233591,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0.821432273351958,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0.196854963029498,0,0,0.544813624446302,0,0.137539436597234,0.415440338029185,3.59958226482401,2.32140586367385,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0.170388021785422,0.453248366080503,0.146552233678082,0,0.258565912723101,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,0,0,0.124192805882767,0.553394539744923,0,2.42638588066636,1.14186133417987,0,0,0,0,0,0,0.568209015825267,0,0,0,0.604923695052956,0.1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| ||
|short_description=p20@SGK1 | |||
}} | }} |
Latest revision as of 21:10, 24 September 2015
Short description: | p20@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SGK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 185bp_to_ENST00000490149_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.40e-40 | 48 |
phagocyte | 1.40e-40 | 48 |
macrophage dendritic cell progenitor | 1.06e-36 | 61 |
granulocyte monocyte progenitor cell | 5.90e-33 | 67 |
monopoietic cell | 2.09e-31 | 59 |
monocyte | 2.09e-31 | 59 |
monoblast | 2.09e-31 | 59 |
promonocyte | 2.09e-31 | 59 |
classical monocyte | 1.35e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-30 | 42 |
myeloid leukocyte | 2.16e-30 | 72 |
myeloid lineage restricted progenitor cell | 1.42e-27 | 66 |
myeloid cell | 2.43e-22 | 108 |
common myeloid progenitor | 2.43e-22 | 108 |
leukocyte | 1.58e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 4.95e-16 | 120 |
nongranular leukocyte | 9.73e-14 | 115 |
hematopoietic oligopotent progenitor cell | 4.74e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-13 | 161 |
macrophage | 1.02e-12 | 6 |
hematopoietic stem cell | 2.90e-12 | 168 |
hematopoietic cell | 2.41e-11 | 177 |
CD1a-positive Langerhans cell | 1.33e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.33e-10 | 2 |
neutrophil | 1.60e-07 | 3 |
light melanocyte | 2.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.30e-31 | 76 |
bone element | 2.48e-28 | 82 |
skeletal element | 2.55e-25 | 90 |
hematopoietic system | 8.08e-25 | 98 |
blood island | 8.08e-25 | 98 |
immune system | 2.53e-24 | 93 |
skeletal system | 3.15e-22 | 100 |
hemolymphoid system | 5.55e-22 | 108 |
musculoskeletal system | 4.66e-11 | 167 |
lateral plate mesoderm | 6.62e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.81e-10 | 2 |