FFCP PHASE1:Hg19::chr14:61116183..61116208,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10887 | |||
|TSSclassifier=strong | |||
|UniProt=Q15475 | |||
|association_with_transcript=-3bp_to_ENST00000247182_5end | |||
|cluster_id=chr14:61116183..61116208,- | |||
|description=CAGE_peak_1_at_SIX1_5end | |||
|id=chr14:61116183..61116208,- | |||
|ontology_enrichment_celltype=CL:0000055!6.01e-18!180;CL:0000057!1.02e-11!75;CL:0000499!1.55e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000499;3.46e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.97e-12,76;CL:0000499,2.91e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.08e-22!365;UBERON:0003102!7.14e-17!95;UBERON:0002100!1.16e-15!216;UBERON:0003104!2.63e-14!238;UBERON:0009142!2.63e-14!238;UBERON:0000481!1.04e-12!347;UBERON:0001004!1.54e-10!72;UBERON:0000914!1.79e-10!83;UBERON:0002329!1.79e-10!83;UBERON:0003077!1.79e-10!83;UBERON:0003059!1.79e-10!83;UBERON:0007282!1.79e-10!83;UBERON:0009618!1.79e-10!83;UBERON:0007285!1.79e-10!83;UBERON:0001444!4.96e-10!48;UBERON:0005256!5.17e-10!143;UBERON:0000161!9.53e-10!35;UBERON:0000165!1.12e-09!28;UBERON:0000930!1.12e-09!28;UBERON:0004119!2.74e-09!169;UBERON:0000925!2.74e-09!169;UBERON:0006595!2.74e-09!169;UBERON:0000486!8.85e-09!82;UBERON:0000078!1.04e-08!18;UBERON:0001007!1.61e-08!155;UBERON:0001555!1.61e-08!155;UBERON:0007026!1.61e-08!155;UBERON:0000915!6.83e-08!52;UBERON:0004290!7.75e-08!70;UBERON:0000077!3.42e-07!130;UBERON:0000464!4.70e-07!104;UBERON:0000166!5.90e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.91e-10;16!UBERON:0002036;3.91e-10;16!UBERON:0000165;4.05e-09;28!UBERON:0002204;2.46e-07;70!UBERON:0001434;4.15e-07;36!UBERON:0004905;7.49e-07;8!UBERON:0000982;7.49e-07;8!UBERON:0004770;7.49e-07;8!UBERON:0000153;8.47e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.16e-15,99;UBERON:0002100,1.71e-12,199;UBERON:0001004,1.82e-11,74;UBERON:0000161,7.57e-10,36;UBERON:0000165,9.92e-10,29;UBERON:0000930,9.92e-10,29;UBERON:0001444,5.92e-09,49;UBERON:0000486,8.44e-09,83;UBERON:0007524,1.33e-08,73;UBERON:0002329,3.66e-08,71;UBERON:0003059,3.66e-08,71;UBERON:0007282,3.66e-08,71;UBERON:0004290,3.66e-08,71;UBERON:0009618,3.66e-08,71;UBERON:0003077,3.70e-08,72;UBERON:0007285,3.70e-08,72;UBERON:0000915,3.82e-08,52;UBERON:0004119,4.68e-08,160;UBERON:0000925,4.68e-08,160;UBERON:0006595,4.68e-08,160;UBERON:0007503,4.70e-08,78;UBERON:0000153,5.49e-08,62;UBERON:0007811,5.49e-08,62;UBERON:0003104,6.26e-08,160;UBERON:0009142,6.26e-08,160;UBERON:0000033,1.14e-07,56;UBERON:0000166,3.08e-07,22;UBERON:0001007,5.11e-07,145;UBERON:0001555,5.11e-07,145;UBERON:0007026,5.11e-07,145;UBERON:0005256,5.30e-07,122;UBERON:0004905,7.53e-07,8;UBERON:0000982,7.53e-07,8;UBERON:0004770,7.53e-07,8 | |||
|phase1_expression=18.7128730648673,26.1202639146999,6.90676580070259,22.0161256376887,7.15137751083661,13.0850778615055,12.6649939084155,7.58063848112197,34.4765029223787,2.21160542851358,2.09340350391728,0,0,274.761303571304,266.774887460972,3.36162573225888,1.80808358407193,2.92124036154949,1.95173119516203,33.6120488549631,95.2683228110661,34.1665646411116,2.0036519099174,2.18999080116615,9.54124060920501,0,0.0821005894499457,0.314843125254717,0,0,1.70297735647684,15.6301608161418,11.1446189947953,8.13458822366933,0,5.11809236954717,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,1.53435074212236,76.9865394579126,96.2568788420908,135.43149522837,22.2680065174308,109.979480688396,12.0059217798366,19.0687281817805,29.6003227785835,2.61958150995425,0.364295288292542,0.370784442784429,0,0.348259474598534,0.531831842075461,0,0,0,1.59009925893364,4.30117297553062,3.12426451446835,1.13061588384802,6.29249154314859,1.37559020970034,0.208994966536811,0.516833518338658,0.71153252537342,0,0.402829317109147,0,0,1.47065232138347,0,0.0892997282840798,0,0,0,0,1.28241220751285,0,0,17.8798561378439,26.8364853915472,4.30543739659571,3.04541115870403,5.44989579422746,9.22137793715728,15.1382952038423,0,4.19334832309172,1.8672662123986,1.61652806483626,0,113.215355878409,125.60635153664,89.0421440968427,9.36480230490961,13.6913237170668,14.4965220135247,19.8464302707963,11.9785978832417,9.97200727585964,79.4159726181535,251.687516171813,96.0929764934619,89.100214296154,122.891663851443,5.46096817162816,6.46756327634615,117.666943653892,192.182046523337,67.3265800626564,138.277950577464,89.1879485775147,89.6921211672383,2.49550802952046,29.4199002529734,18.1523780495782,14.1994373776906,13.8041904198825,13.9120914471893,27.825178324928,17.3088676388379,4.72573730275545,5.45647228902712,33.068824425979,17.0292312488254,16.8111899091564,14.2003837006646,9.87370562630875,22.3819981849844,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.132529768321485,1.16193942869518,6.21966330092223,0.252320850875628,0.36497735907583,12.5159625863853,23.7999147131368,6.90674606762403,39.9356418107502,51.9753226802102,4.25904480143438,3.37169380156203,4.82022059766964,3.74999507290139,5.22910665821775,4.50814176311084,2.15730093056263,3.33576490713088,3.46272441251751,0.738155454624648,51.889456307275,0,13.2307840246988,0,0,0,0,1.47586126251736,7.03428022223955,0.109750285408626,1.1240175325762,0,0.833296006426766,47.8938208806177,10.3993478527958,18.7630744632855,0.695582429850461,52.012051546469,2.7429625074604,3.70388410061289,2.09279567458058,8.69224837755203,9.4433477830436,0,0,0,0,0.16798212819886,0.141775097242386,1.16426079513703,0.871901815541886,2.68367875415648,0,0,0,0,0,0.063497894292169,0.381988425558278,0,8.55362230113526,0.719792448923265,0,0,224.262168690721,74.9851318393242,196.986635715072,0.129271715757778,42.9187735022259,23.668477071568,0.797814349754612,4.16029747645464,162.555060533674,148.941588624442,138.539533088372,0,0,0,24.1044776377364,0,0,0,0,0.399891964728228,0,0,0,99.92356473999,160.806710167759,101.27220257891,36.0505453602272,107.2586403713,73.9521778180769,0,0,0,0,0,0,1.54657762555539,0,1.27587750330633,0,0,0,408.194592949578,244.583384798182,134.276186731369,149.53104944065,184.138716438671,132.943135873607,227.020062255878,100.816943408786,52.3037259328765,53.8059970721026,55.1307246784412,35.9519878656321,40.1402298842543,175.04623477169,171.914855329239,0,0,0,0.303127571446259,1.66435439510497,6.35019615992329,11.9091747753013,16.4204311418227,14.0330047216537,3.20347873139252,8.69902323413396,4.18220194973379,8.90508398669946,15.1125499926602,6.21466038595945,11.7441833099747,6.75030757938707,9.99409254755649,0.966875596732978,18.4465952679022,15.5616871301665,26.1776941815303,68.2841880025189,54.8100054530393,6.76799419361118,5.39107359730903,23.5304930753057,11.6911379722609,9.28854334257306,0,0.340187410553031,15.7618618754562,6.16909010761157,26.2818044417537,21.5726602757587,6.37190682612596,8.31076008928724,9.40273969833149,0,0,0.769350375349168,0,3.57916234130733,1.95777922130672,6.9592793261941,5.5281364946794,0.574265537996172,1.30012049207304,6.42735719376638,193.14809514766,37.2797653417439,45.4370877189344,52.3778975441216,50.7023555778252,76.8588477745411,45.9371521772784,139.869328001024,11.4046591599075,9.03293316615999,8.42243902464255,17.0956649645879,11.1562931831349,9.12955805808856,7.6674099717666,13.5534775277479,3.72614221221915,10.4391959049009,2.59453906745488,1.14499909393593,109.786718961102,60.1120906965579,9.15024930834359,73.6985638976642,152.346279740076,9.5460974377781,7.8494864019923,5.03642881233281,0.274537029736055,0.706874414074119,3.03273722359974,1.58510321173008,2.94880919367287,12.1908434772398,18.2785117223463,6.33900880540533,21.9764857366857,10.8882182604359,14.6910551606316,8.27048015319186,4.64407282668854,4.38450885253763,52.6685736182686,114.781581608161,0,3.40805847909725,2.81695602532241,0,0.0982490410131212,0.35667105148125,0.354761064070598,150.94195923783,59.6023756257422,33.7731124651486,22.3958220956789,12.1239862034145,14.7466500617873,8.71127878890581,2.7301702225266,8.6101074534246,1.68471475667626,12.4160442990269,7.12142540641574,0,0,0,0,0,0,0,0,0.427296284509893,2.88743956579008,12.0069705830706,0,0,0,2.55082036366116,0,0,0,1.94773164164733,0,0,0,0,0,0,1.61439765752838,0.425846237690326,0,3.99412993600995,3.57881772627865,4.50492682622153,0,0,6.15436994738562,5.67956924799565,0,1.4098700508785,4.49137296979728,19.1925714846181,6.06802608747567,47.8092118550382,22.1626194509002,0,3.26661148915902,0.307160702099232,0,0.140669416410513,163.623796383672,17.3044067938098,8.65614173324773,15.3420950953324,1.10513566212459,6.2983186963569,11.86316717025,0,16.4850981460758,1.16828856491525,0,0,4.43895325366201,0,22.2273980289274,0.969332746095218,1.76259386507517,0,6.2502662660456,51.8637799977441,13.7749919332611,10.468997242266,6.35634125731916,13.9468732243082,0,8.74813840149763,6.42412481253181,0,0.723578631752448,0,0.995213339381022,0.295547618953547,9.87234287192876,1.41620002574687,6.69233972537296,7.61807559187591,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0,0,0,0,0,1.1279783030859,1.9606253431774,1.34257269580674,2.65655225813859,0,9.28391483923319,5.54991547741102,0.282706142867882,11.4685979063308,0,0.353830258013357,0.611030144933625,2.37216902944498,4.2011739241811,5.63878527329459,1.55022605855557,53.7727023690188,0.234264445725339,3.64909578431332,7.04392628155523,18.9368696036592,0,1.20990716048664,1.22429104652196,114.810015184963,19.3917211044695,32.2470275245439,29.2447703991161,57.2616083664613,23.8589017989491,35.8417289318877,0.284609546029793,0.693373365065693,28.2902373486263,18.7165479061461,26.9883540399248,6.63961339319714,78.7696028720004,4.93457289574334,3.65446585430928,5.50173562256502,4.26751672549045,2.91245218081951,20.5642474110285,7.12618008163105,6.95501140960464,0.759729551470544,8.99536360580094,0,1.06726497369676,5.39485945871752,8.78951544640046,4.58146384663663,11.6684598546136,2.73704116177484,41.7488519499853,6.12804490003668,0.951329442515298,1.67364554099733,31.0074581614418,3.46740707881823,0,0.958337652243951,0,0.859530882839914,0.262887354279314,0,1.83328339209347,2.15361907373044,5.39133301347276,0.429226048136571,0.223171457441873,0.134366944973453,2.88239906833923,1.16495949527454,11.8174773460835,9.06574442192831,10.582356385107,11.0238779296519,6.77386656526276,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.91124334987037,2.34804281319486,0.236417121897595,6.66173269314476,18.3744585543767,6.45434421598241,25.7166364408057,2.85878130549347,0,1.77987976358325,0.542999601753713,0,0,9.578415324999,0.985110248992068,3.40776043570843,16.4302532704182,0,0,0,0.92562821219883,3.76391043345525,8.45778026780006,6.51403216662938,20.2793553578569,5.38510771951354,0.496166021811951,0,0,20.4269202486458,41.8893708594495,53.6476373208578,37.9868515186692,30.164282025302,10.3655703525155,0,0.244052529803926,0.625954653532499,0.573409195690071,14.8644929059382,2.98062734118641,16.0484416526028,8.24870692549904,0.151649117541648,3.99651466962954,27.7613667243843,0,36.8099412671496,5.97019211547496,8.41367915450008,4.43844689202091,17.046270474758,22.1379753542266,27.5841478694926,2.51724075236616,2.26846385644859,4.66311601748341,1.33069634990671,1.27437413730962,0.449803112163605,1.39736661188633,0.414706207840855,0.265841714557995,1.5652351854352,0.300515217994437,0,0.406870733204662,2.18218391043071,0.107410557042488,2.32016879939247,0.398095888698616,144.410023043398,25.7546778887095,30.3074539889327,27.7606776103032,10.5940906724017,0.214441591374926,20.0965604813213,8.84153109497862,3.24131464053368,13.4605187478557,4.2981321859557,2.77921302444875,3.28926074368061,11.838172778374,2.50788249752189,1.68942440653073,0.76872455576384,8.98118888501116,14.5852778965143,0.691292180758654,0,0,0.163565394255844,43.8997197454193,25.8061554191405,0.211312123358627,1.9998739585493,0,0.172214979660816,36.3210210282775,8.65297966183651,10.9106016021167,18.6623178009892,0,12.0763788764284,38.0583579291269,3.49470842214445,10.5234168571496,0,0.991486114072017,1.67593475391973,4.45206090914786,0,0.80057074828547,204.904723284287,31.5432841673796,1.28458450192919,1.41696576325585,0.957803154342908,0.615349092722265,0.504143392443436,1.24483054435592,4.52131807769183,7.13847101295772,11.9740216571251,33.3854317074105,12.2897161009525,5.89180897366725,17.1621942960225,40.7312356375459,14.1230517702555,0.752103283492572,19.3636865955379,0.781514011233092,0,15.230788328439,2.95712172434091,0.810451015420736,0,0,1.14148458349032,0,130.485348512009,65.9960867257761,15.1249270149274,9.07113236241126,1.07140367175657,1.00885116665647,64.9453196533196,93.7968228367346,0,1.26757386311357,2.7438081509987,2.44691038716594,1.05236437700559,8.27356886187777,27.4741562673411,23.5479278551542,0,0,1.82631744101899,0,0,6.2184593433691,1.58013611732727,17.7849380813232,124.134806424042,46.4992591543547,53.0473380257374,82.1155874821899,85.7161980649474,161.335259557604,12.1881960752482,15.8496932852033,1.27016115057279,10.5389159530263,8.99598518426528,6.68877257284203,1.90154234056247,0,0.731507549893617,97.7617544153721,102.354818435678,125.259958584526,15.0570407848333,17.77939922312,12.9318003854889,3.09192236021678,4.29195111748048,8.35547927265261,77.4439387497035,0,0.218559560503957,7.99539403814589,2.69663153929296,4.24217784782927,0.588925401344836,2.97046400327086,53.6772774030918,26.5086298912994,0,0.644578879735772,0,18.748163553594,0,15.0051355708745,0.730336388246517,100.00298378219,1.14671666521161,77.4658370368536,0.543931921527318,1.74540276136151,1.5870805215462,86.3028442146863,61.4693586079786,46.7236687093692,1.51399709802095,0,0,0.101988829741982,0.26721740526556,3.6757959813938,0.250707539292375,5.0013940824038,5.89521086343593,0,1.13776295448085,73.1392557920365,45.9464352725019,13.6928488852333,23.7746155753136,4.70953822838576,6.61930446092915,8.48892193624521,56.60635445321,72.8956931311649,8.01489430873592,42.2443789762864,65.8667505961106,15.1410079616413,20.5983777543991,131.289151955119,6.46741455167426,14.0784565442073,1.34465588601153,15.4620547759981,25.964514193235,22.743938675786,0 | |||
|short_description=p1@SIX1 | |||
}} |
Latest revision as of 20:56, 24 September 2015
Short description: | p1@SIX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000247182_5end |
EntrezGene: | SIX1 |
HGNC: | 10887 |
UniProt: | Q15475 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.97e-12 | 76 |
stromal cell | 2.91e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.16e-15 | 99 |
trunk | 1.71e-12 | 199 |
respiratory system | 1.82e-11 | 74 |
orifice | 7.57e-10 | 36 |
mouth | 9.92e-10 | 29 |
stomodeum | 9.92e-10 | 29 |
subdivision of head | 5.92e-09 | 49 |
multilaminar epithelium | 8.44e-09 | 83 |
dense mesenchyme tissue | 1.33e-08 | 73 |
somite | 3.66e-08 | 71 |
presomitic mesoderm | 3.66e-08 | 71 |
presumptive segmental plate | 3.66e-08 | 71 |
dermomyotome | 3.66e-08 | 71 |
trunk paraxial mesoderm | 3.66e-08 | 71 |
paraxial mesoderm | 3.70e-08 | 72 |
presumptive paraxial mesoderm | 3.70e-08 | 72 |
thoracic segment of trunk | 3.82e-08 | 52 |
endoderm-derived structure | 4.68e-08 | 160 |
endoderm | 4.68e-08 | 160 |
presumptive endoderm | 4.68e-08 | 160 |
epithelial vesicle | 4.70e-08 | 78 |
anterior region of body | 5.49e-08 | 62 |
craniocervical region | 5.49e-08 | 62 |
mesenchyme | 6.26e-08 | 160 |
entire embryonic mesenchyme | 6.26e-08 | 160 |
head | 1.14e-07 | 56 |
oral opening | 3.08e-07 | 22 |
digestive system | 5.11e-07 | 145 |
digestive tract | 5.11e-07 | 145 |
primitive gut | 5.11e-07 | 145 |
trunk mesenchyme | 5.30e-07 | 122 |
articulation | 7.53e-07 | 8 |
skeletal joint | 7.53e-07 | 8 |
articular system | 7.53e-07 | 8 |