FFCP PHASE1:Hg19::chr1:209929446..209929490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80342 | |EntrezGene=80342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |HGNC=30766 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU99,C9JXB3 | |UniProt=B4DU99,C9JXB3 | ||
|association_with_transcript=0bp_to_ENST00000458110,ENST00000468672,ENST00000479796_5end | |association_with_transcript=0bp_to_ENST00000458110,ENST00000468672,ENST00000479796_5end | ||
|cluster_id=chr1:209929446..209929490,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_1_at_TRAF3IP3_5end | |description=CAGE_peak_1_at_TRAF3IP3_5end | ||
|id=chr1:209929446..209929490,+ | |id=chr1:209929446..209929490,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.24e-82!172;CL:0000566!2.24e-82!172;CL:0000988!2.79e-80!182;CL:0002032!4.39e-77!165;CL:0000837!4.39e-77!165;CL:0000738!8.94e-76!140;CL:0002087!3.41e-65!119;CL:0002031!1.19e-64!124;CL:0000542!4.79e-39!53;CL:0000051!4.79e-39!53;CL:0000838!1.83e-38!52;CL:0000763!7.65e-36!112;CL:0000049!7.65e-36!112;CL:0000766!1.73e-31!76;CL:0000839!2.92e-26!70;CL:0000557!1.01e-25!71;CL:0002194!2.37e-23!63;CL:0000576!2.37e-23!63;CL:0000040!2.37e-23!63;CL:0000559!2.37e-23!63;CL:0002009!9.32e-23!65;CL:0002057!1.94e-22!42;CL:0000860!7.63e-20!45;CL:0000084!1.55e-19!25;CL:0000827!1.55e-19!25;CL:0000945!1.06e-17!24;CL:0000826!1.06e-17!24;CL:0000791!1.40e-15!18;CL:0000789!1.40e-15!18;CL:0002420!1.40e-15!18;CL:0002419!1.40e-15!18;CL:0000790!1.40e-15!18;CL:0000134!1.78e-12!358;CL:0000236!5.37e-12!14;CL:0002320!2.05e-11!365;CL:0000625!2.81e-10!11;CL:0000219!6.82e-08!390;CL:0002393!1.34e-07!9;CL:0002397!1.34e-07!9;CL:0000094!2.42e-07!8;CL:0000081!6.88e-07!11 | |ontology_enrichment_celltype=CL:0000037!2.24e-82!172;CL:0000566!2.24e-82!172;CL:0000988!2.79e-80!182;CL:0002032!4.39e-77!165;CL:0000837!4.39e-77!165;CL:0000738!8.94e-76!140;CL:0002087!3.41e-65!119;CL:0002031!1.19e-64!124;CL:0000542!4.79e-39!53;CL:0000051!4.79e-39!53;CL:0000838!1.83e-38!52;CL:0000763!7.65e-36!112;CL:0000049!7.65e-36!112;CL:0000766!1.73e-31!76;CL:0000839!2.92e-26!70;CL:0000557!1.01e-25!71;CL:0002194!2.37e-23!63;CL:0000576!2.37e-23!63;CL:0000040!2.37e-23!63;CL:0000559!2.37e-23!63;CL:0002009!9.32e-23!65;CL:0002057!1.94e-22!42;CL:0000860!7.63e-20!45;CL:0000084!1.55e-19!25;CL:0000827!1.55e-19!25;CL:0000945!1.06e-17!24;CL:0000826!1.06e-17!24;CL:0000791!1.40e-15!18;CL:0000789!1.40e-15!18;CL:0002420!1.40e-15!18;CL:0002419!1.40e-15!18;CL:0000790!1.40e-15!18;CL:0000134!1.78e-12!358;CL:0000236!5.37e-12!14;CL:0002320!2.05e-11!365;CL:0000625!2.81e-10!11;CL:0000219!6.82e-08!390;CL:0002393!1.34e-07!9;CL:0002397!1.34e-07!9;CL:0000094!2.42e-07!8;CL:0000081!6.88e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.94e-24;53!CL:0000084;4.24e-21;25!CL:0002087;1.22e-20;104!CL:0000945;5.58e-19;24!CL:0000738;2.92e-18;136!CL:0000576;7.23e-18;48!CL:0000791;7.78e-18;18!CL:0000789;7.78e-18;18!CL:0002419;7.78e-18;18!CL:0000860;3.35e-17;33!CL:0002057;3.35e-17;33!CL:0000766;7.91e-17;69!CL:0000473;1.68e-16;39!CL:0000234;1.68e-16;39!CL:0000988;1.43e-14;177!CL:0000763;2.69e-13;100!CL:0000625;1.11e-11;11!CL:0000236;1.25e-11;13!CL:0000094;2.86e-08;8!CL:0000219;5.48e-08;193!CL:0000081;7.17e-08;11!CL:0000624;5.11e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.86e-94,168;CL:0000988,6.81e-93,177;CL:0000738,5.12e-89,136;CL:0002032,8.82e-88,161;CL:0000837,8.82e-88,161;CL:0002087,1.10e-77,115;CL:0002031,8.40e-75,120;CL:0000542,2.31e-42,53;CL:0000051,2.31e-42,53;CL:0000763,5.62e-42,108;CL:0000049,5.62e-42,108;CL:0000838,1.10e-41,52;CL:0000766,2.84e-40,72;CL:0000839,6.33e-33,66;CL:0000557,2.07e-32,67;CL:0002194,1.59e-30,59;CL:0000576,1.59e-30,59;CL:0000040,1.59e-30,59;CL:0000559,1.59e-30,59;CL:0002009,6.71e-29,61;CL:0000473,5.01e-28,48;CL:0000234,5.01e-28,48;CL:0000860,9.11e-26,42;CL:0002057,9.11e-26,42;CL:0000084,4.49e-21,25;CL:0000827,4.49e-21,25;CL:0000134,8.59e-20,354;CL:0000945,5.61e-19,24;CL:0000826,5.61e-19,24;CL:0002320,1.46e-18,361;CL:0000791,8.23e-18,18;CL:0000789,8.23e-18,18;CL:0002420,8.23e-18,18;CL:0002419,8.23e-18,18;CL:0000790,8.23e-18,18;CL:0000219,2.41e-14,386;CL:0000236,2.58e-12,14;CL:0000625,1.16e-11,11;CL:0000048,1.68e-09,427;CL:0000034,4.79e-09,441;CL:0000723,7.16e-09,433;CL:0002393,1.46e-08,9;CL:0002397,1.46e-08,9;CL:0000094,2.89e-08,8;CL:0000081,7.55e-08,11;CL:0000624,5.20e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;3.94e-24;53!CL:0002057;1.48e-18;42!CL:0000790;7.78e-18;18!CL:0000049;4.12e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!1.23e-13!51;DOID:0060083!1.23e-13!51;DOID:1240!7.14e-10!39;DOID:0060058!5.69e-07!10 | |ontology_enrichment_disease=DOID:2531!1.23e-13!51;DOID:0060083!1.23e-13!51;DOID:1240!7.14e-10!39;DOID:0060058!5.69e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.99e-08;51!DOID:0060083;2.99e-08;51!DOID:1240;2.10e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.31e-13,51;DOID:0060083,2.31e-13,51;DOID:1240,1.08e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.88e-37!102;UBERON:0003061!2.88e-37!102;UBERON:0002193!2.54e-33!112;UBERON:0002371!2.27e-22!80;UBERON:0001474!3.28e-19!86;UBERON:0007023!4.39e-18!115;UBERON:0002405!1.98e-16!115;UBERON:0004765!1.19e-13!101;UBERON:0001434!1.19e-13!101;UBERON:0000178!4.20e-12!15;UBERON:0000179!4.20e-12!15;UBERON:0000463!4.20e-12!15;UBERON:0002384!2.68e-10!375;UBERON:0003081!7.99e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!2.88e-37!102;UBERON:0003061!2.88e-37!102;UBERON:0002193!2.54e-33!112;UBERON:0002371!2.27e-22!80;UBERON:0001474!3.28e-19!86;UBERON:0007023!4.39e-18!115;UBERON:0002405!1.98e-16!115;UBERON:0004765!1.19e-13!101;UBERON:0001434!1.19e-13!101;UBERON:0000178!4.20e-12!15;UBERON:0000179!4.20e-12!15;UBERON:0000463!4.20e-12!15;UBERON:0002384!2.68e-10!375;UBERON:0003081!7.99e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.15e-14;15!UBERON:0000179;9.15e-14;15!UBERON:0000463;9.15e-14;15!UBERON:0002390;1.14e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.70e-46,98;UBERON:0003061,1.70e-46,98;UBERON:0002193,3.80e-42,108;UBERON:0002405,2.91e-30,93;UBERON:0002371,1.37e-28,76;UBERON:0001474,6.02e-25,82;UBERON:0004765,6.65e-21,90;UBERON:0002384,6.58e-17,371;UBERON:0001434,7.57e-17,100;UBERON:0000178,8.88e-14,15;UBERON:0000179,8.88e-14,15;UBERON:0000463,8.88e-14,15;UBERON:0003081,8.75e-11,203;UBERON:0004177,3.66e-07,7;UBERON:0005057,3.66e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8710159221723,29.4741116125305,31.7991556507264,16.9146639045029,18.8076405067634,14.243083345079,0,0,0,6.19737604642413,8.53015394924529,9.9824149373848,15.5118714388926,14.2386557703801,13.8886957258145,2.01523926815932,9.39291631455041,3.8636335145128,9.8870802370104,4.91238726795452,8.73302620276138,7.67015821788759,6.16751832032739,4.33588919253145,6.90461741573161,4.35473201099471,4.25668013799453,6.89491361473237,8.39130088658974,12.1883837934908,10.3533286748433,6.5497476013883,4.04502272001152,10.1007684482398,8.66508373105453,7.67204550958849,3.62836430205388,5.78444607102732,4.68847225585964,4.06292934080018,2.26954089876456,5.60540024096017,4.27122730936464,6.77927793946262,7.16723187526885,4.23779651843358,6.2607198117886,2.84816148696796,29.9982506562957,24.236890196015,29.3522103711726,35.2711901799995,25.3798948902146,25.5553682848357,32.4914527865023,33.8158351238453,29.2262646023414,47.5189860045571,58.4368314050481,55.1495737395404,64.0095333849761,54.4538542368977,69.5450452344925,70.0707565151954,64.8756553084048,27.891435486363,25.2511991429504,21.0250275468876,2.64342657158052,2.80254281490768,7.37475437370216,30.4900143676441,30.6548394944348,21.382555895949,56.8434084328306,60.6215415938478,52.5527064365554,81.8272259313228,66.5120427604486,50.0830042707223,46.0790500733932,51.723537979118,56.4882719990227,60.0874185726637,51.9623778547617,44.4923528635216,53.3237677752497,58.5731924490139,68.7579928190563,55.4038276166377,43.7374062812605,46.3696797258325,46.7333325856377,46.808643023608,62.1202557931989,51.4355928546571,56.0766706224541,28.9104228629324,31.3567197328325,56.2188269485556,58.0104267507841,49.2676798152628,29.0313710243615,18.988253900629,25.6339194872554,0,0,0,0,0,0,0,0,0,0,0.527008714158756,1.70272798147026,0,0,2.27183175558278,3.48259474598534,6.78085598646212,7.15471872916026,5.14795419702115,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.2080128923923,58.1670396222488,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.5511955555134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41677413392274,1.17002132569619,3.56714789492948,0,0,0,0,0,0,3.4486426652716,13.8236041400765,6.84182781284548,13.8355155280283,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,3.51579964002488,2.10833939483032,0,1.14861935834114,0,0,0,0,22.3049436547119,31.7219523925103,22.2096402105303,23.486775639194,0,0,0,0,0,44.9404214368309,23.932916736322,30.2523324808306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.4964202319078,19.6299922744941,28.0693477023059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.657779629937804,2.0914836081992,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,29.939408944698,16.8220185571323,50.1289524713263,51.2198317234246,43.6044009471366,21.3996192693597,17.8210374288578,34.1043825806536,0,0,0,13.7494349593032,0.865615277858669,29.381581302895,16.1020535456111,11.5756035431034,10.3412899871478,8.6786168916792,6.16781686521655,7.01992945283647,11.1834992726264,1.72347885350326,20.0507581672054,7.78742177887375,5.13881840331838,8.67738740921505,11.0720021799485,7.55711758462682,1.53620382154229,1.78940886313933,2.33588798396672,14.458719059751,0,0,0,1.99843180798692,0,0,0.73254089635947,0,18.2767150215065,0,0,0.593929361665277,0,0,1.68803299692615,0,0.824019371133798,0,0.398495976502139,25.1418363133344,0,0,13.9085830171009,0,0,0,11.7661645152181,0.986434056369336,38.3172947755104,0,0.969332746095218,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0.442317039724898,0,0.438770794307945,0,0,0.692552326534174,0,0,0,0,0,0,0,24.5263915669768,0.784901281975124,4.32150372940407,0,0,0,0,4.92703394839174,0,0,0,0,1.99052386215701,3.53830258013357,3.05515072466813,8.89563386041866,28.4197059576957,29.8646775585602,2.15683625538167,0,2.10838001152805,22.8068486519583,0,0,0,4.83962864194656,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.93978032976839,0,0,0,0,0.823040347426423,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0,2.46429682005587,11.4971929260275,0,14.7216918396416,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,21.9303930050382,0,2.17925449778521,0,0,0,0.2249738915515,0,0.91124334987037,0,0.788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0,1.02586563574658,0,0.129282956361551,2.6446520348538,0,0,3.9511342650047,0.628817220398664,3.31391244277756,14.8849806543585,25.4919005148348,5.60245952552121,0,0,0,0,0,0,0,0.122026264901963,0.751145584238999,0.573409195690071,2.3295100822739,1.98708489412427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p1@TRAF3IP3 | |short_description=p1@TRAF3IP3 | ||
}} | }} |
Latest revision as of 20:49, 24 September 2015
Short description: | p1@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAF3IP3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000458110, ENST00000468672, ENST00000479796_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | B4DU99C9JXB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.70e-46 | 98 |
blood island | 1.70e-46 | 98 |
hemolymphoid system | 3.80e-42 | 108 |
immune system | 2.91e-30 | 93 |
bone marrow | 1.37e-28 | 76 |
bone element | 6.02e-25 | 82 |
skeletal element | 6.65e-21 | 90 |
connective tissue | 6.58e-17 | 371 |
skeletal system | 7.57e-17 | 100 |
blood | 8.88e-14 | 15 |
haemolymphatic fluid | 8.88e-14 | 15 |
organism substance | 8.88e-14 | 15 |
lateral plate mesoderm | 8.75e-11 | 203 |
hemopoietic organ | 3.66e-07 | 7 |
immune organ | 3.66e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.31e-13 | 51 |
immune system cancer | 2.31e-13 | 51 |
leukemia | 1.08e-09 | 39 |