FFCP PHASE1:Hg19::chr9:124062100..124062115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2934 | |EntrezGene=2934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |HGNC=4620 | ||
|TSSclassifier=strong | |||
|UniProt=P06396,Q5T0I2 | |UniProt=P06396,Q5T0I2 | ||
|association_with_transcript=21bp_to_NM_000177,uc004blf.1_5end | |association_with_transcript=21bp_to_NM_000177,uc004blf.1_5end | ||
|cluster_id=chr9:124062100..124062115,+ | |||
|coexpression_cluster_id=C1700 | |coexpression_cluster_id=C1700 | ||
|description=CAGE_peak_2_at_GSN_5end | |description=CAGE_peak_2_at_GSN_5end | ||
|id=chr9:124062100..124062115,+ | |id=chr9:124062100..124062115,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.51e-08!15 | |ontology_enrichment_celltype=CL:0000136!1.51e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.55e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.16e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.23e-33!115;UBERON:0004111!1.25e-17!241;UBERON:0000468!3.09e-17!659;UBERON:0000477!4.62e-16!286;UBERON:0000467!1.03e-13!625;UBERON:0000025!1.49e-13!194;UBERON:0000475!1.50e-13!365;UBERON:0000480!2.15e-13!626;UBERON:0000062!4.68e-13!511;UBERON:0000481!1.32e-12!347;UBERON:0001049!6.79e-12!57;UBERON:0005068!6.79e-12!57;UBERON:0006241!6.79e-12!57;UBERON:0007135!6.79e-12!57;UBERON:0003075!1.75e-11!86;UBERON:0007284!1.75e-11!86;UBERON:0000119!8.90e-11!312;UBERON:0000483!1.28e-10!309;UBERON:0002616!1.98e-10!59;UBERON:0002346!3.73e-10!90;UBERON:0000064!1.27e-09!219;UBERON:0000922!1.63e-09!612;UBERON:0002050!5.06e-09!605;UBERON:0005423!5.06e-09!605;UBERON:0000923!9.39e-09!604;UBERON:0005291!9.39e-09!604;UBERON:0006598!9.39e-09!604;UBERON:0002532!9.39e-09!604;UBERON:0003080!2.19e-08!42;UBERON:0000153!2.23e-08!129;UBERON:0007811!2.23e-08!129;UBERON:0003103!2.83e-08!69;UBERON:0000033!3.15e-08!123;UBERON:0000955!6.32e-08!69;UBERON:0006238!6.32e-08!69;UBERON:0002780!7.08e-08!41;UBERON:0001890!7.08e-08!41;UBERON:0006240!7.08e-08!41;UBERON:0005743!1.40e-07!86;UBERON:0001017!5.59e-07!82;UBERON:0003056!9.66e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!5.23e-33!115;UBERON:0004111!1.25e-17!241;UBERON:0000468!3.09e-17!659;UBERON:0000477!4.62e-16!286;UBERON:0000467!1.03e-13!625;UBERON:0000025!1.49e-13!194;UBERON:0000475!1.50e-13!365;UBERON:0000480!2.15e-13!626;UBERON:0000062!4.68e-13!511;UBERON:0000481!1.32e-12!347;UBERON:0001049!6.79e-12!57;UBERON:0005068!6.79e-12!57;UBERON:0006241!6.79e-12!57;UBERON:0007135!6.79e-12!57;UBERON:0003075!1.75e-11!86;UBERON:0007284!1.75e-11!86;UBERON:0000119!8.90e-11!312;UBERON:0000483!1.28e-10!309;UBERON:0002616!1.98e-10!59;UBERON:0002346!3.73e-10!90;UBERON:0000064!1.27e-09!219;UBERON:0000922!1.63e-09!612;UBERON:0002050!5.06e-09!605;UBERON:0005423!5.06e-09!605;UBERON:0000923!9.39e-09!604;UBERON:0005291!9.39e-09!604;UBERON:0006598!9.39e-09!604;UBERON:0002532!9.39e-09!604;UBERON:0003080!2.19e-08!42;UBERON:0000153!2.23e-08!129;UBERON:0007811!2.23e-08!129;UBERON:0003103!2.83e-08!69;UBERON:0000033!3.15e-08!123;UBERON:0000955!6.32e-08!69;UBERON:0006238!6.32e-08!69;UBERON:0002780!7.08e-08!41;UBERON:0001890!7.08e-08!41;UBERON:0006240!7.08e-08!41;UBERON:0005743!1.40e-07!86;UBERON:0001017!5.59e-07!82;UBERON:0003056!9.66e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.32e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.38e-32,114;UBERON:0004111,6.55e-17,240;UBERON:0000025,6.26e-13,192;UBERON:0003075,1.46e-11,82;UBERON:0007284,1.46e-11,82;UBERON:0001049,2.18e-11,56;UBERON:0005068,2.18e-11,56;UBERON:0006241,2.18e-11,56;UBERON:0007135,2.18e-11,56;UBERON:0010314,6.24e-11,132;UBERON:0000119,1.68e-10,309;UBERON:0000483,2.40e-10,306;UBERON:0000073,3.26e-10,53;UBERON:0002616,3.26e-10,53;UBERON:0002346,5.70e-10,86;UBERON:0011216,4.52e-08,223;UBERON:0003103,6.81e-08,68;UBERON:0002780,7.35e-08,41;UBERON:0001890,7.35e-08,41;UBERON:0003080,7.35e-08,41;UBERON:0006240,7.35e-08,41;UBERON:0000955,1.26e-07,68;UBERON:0006238,1.26e-07,68;UBERON:0000922,2.01e-07,592;UBERON:0010371,2.53e-07,104;UBERON:0000923,7.43e-07,560;UBERON:0010316,7.43e-07,560;UBERON:0005291,7.43e-07,560;UBERON:0006598,7.43e-07,560;UBERON:0010317,7.43e-07,560;UBERON:0002532,7.43e-07,560;UBERON:0002050,9.42e-07,564;UBERON:0005423,9.81e-07,581 | |||
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| ||
|short_description=p2@GSN | |short_description=p2@GSN | ||
}} | }} |
Latest revision as of 20:45, 24 September 2015
Short description: | p2@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GSN_5end |
Coexpression cluster: | C1700_heart_adipose_mature_breast_left_smooth_vagina |
Association with transcript: | 21bp_to_NM_000177, uc004blf.1_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | P06396Q5T0I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.16e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.38e-32 | 114 |
anatomical conduit | 6.55e-17 | 240 |
tube | 6.26e-13 | 192 |
neural plate | 1.46e-11 | 82 |
presumptive neural plate | 1.46e-11 | 82 |
neural tube | 2.18e-11 | 56 |
neural rod | 2.18e-11 | 56 |
future spinal cord | 2.18e-11 | 56 |
neural keel | 2.18e-11 | 56 |
structure with developmental contribution from neural crest | 6.24e-11 | 132 |
cell layer | 1.68e-10 | 309 |
epithelium | 2.40e-10 | 306 |
regional part of nervous system | 3.26e-10 | 53 |
regional part of brain | 3.26e-10 | 53 |
neurectoderm | 5.70e-10 | 86 |
organ system subdivision | 4.52e-08 | 223 |
compound organ | 6.81e-08 | 68 |
regional part of forebrain | 7.35e-08 | 41 |
forebrain | 7.35e-08 | 41 |
anterior neural tube | 7.35e-08 | 41 |
future forebrain | 7.35e-08 | 41 |
brain | 1.26e-07 | 68 |
future brain | 1.26e-07 | 68 |
embryo | 2.01e-07 | 592 |
ecto-epithelium | 2.53e-07 | 104 |
germ layer | 7.43e-07 | 560 |
germ layer / neural crest | 7.43e-07 | 560 |
embryonic tissue | 7.43e-07 | 560 |
presumptive structure | 7.43e-07 | 560 |
germ layer / neural crest derived structure | 7.43e-07 | 560 |
epiblast (generic) | 7.43e-07 | 560 |
embryonic structure | 9.42e-07 | 564 |
developing anatomical structure | 9.81e-07 | 581 |