FFCP PHASE1:Hg19::chr18:8707629..8707682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:8707629..8707682,- | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_at_chr18:8707629..8707682,- | |description=CAGE_peak_at_chr18:8707629..8707682,- | ||
|id=chr18:8707629..8707682,- | |id=chr18:8707629..8707682,- | ||
|ontology_enrichment_celltype=CL:0000055!9.99e-08!180;CL:0000243!1.32e-07!15;CL:0000125!1.32e-07!15;CL:0000030!1.32e-07!15;CL:0000339!1.32e-07!15;CL:0002620!1.58e-07!23 | |ontology_enrichment_celltype=CL:0000055!9.99e-08!180;CL:0000243!1.32e-07!15;CL:0000125!1.32e-07!15;CL:0000030!1.32e-07!15;CL:0000339!1.32e-07!15;CL:0002620!1.58e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.12e-10;7!CL:0000126;2.12e-10;7!CL:0000127;2.12e-10;7!CL:0002603;3.88e-07;3!CL:0002605;9.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.53e-10,7;CL:0000126,2.53e-10,7;CL:0000127,2.53e-10,7;CL:0002453,2.53e-10,7;CL:0002603,2.22e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.21e-08;3!UBERON:0008947;4.46e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.36e-16!365;UBERON:0005743!6.43e-14!86;UBERON:0000955!6.44e-14!69;UBERON:0006238!6.44e-14!69;UBERON:0001017!2.43e-13!82;UBERON:0000073!2.79e-13!94;UBERON:0001016!2.79e-13!94;UBERON:0000481!4.79e-13!347;UBERON:0000033!1.14e-12!123;UBERON:0000153!5.87e-12!129;UBERON:0007811!5.87e-12!129;UBERON:0000064!6.86e-12!219;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0001049!2.33e-10!57;UBERON:0005068!2.33e-10!57;UBERON:0006241!2.33e-10!57;UBERON:0007135!2.33e-10!57;UBERON:0002616!2.46e-10!59;UBERON:0002346!6.51e-10!90;UBERON:0004121!1.11e-09!169;UBERON:0004733!2.63e-09!12;UBERON:0002028!2.63e-09!12;UBERON:0007277!2.63e-09!12;UBERON:0000924!2.88e-09!173;UBERON:0006601!2.88e-09!173;UBERON:0001737!1.93e-08!9;UBERON:0002020!2.68e-08!34;UBERON:0003528!2.68e-08!34;UBERON:0004732!3.00e-08!13;UBERON:0000956!4.17e-08!25;UBERON:0000203!4.17e-08!25;UBERON:0001869!4.50e-08!32;UBERON:0002680!7.83e-08!9;UBERON:0001895!7.83e-08!9;UBERON:0010092!7.83e-08!9;UBERON:0000477!8.02e-08!286;UBERON:0001893!9.31e-08!34;UBERON:0000063!1.38e-07!97;UBERON:0003056!1.71e-07!61;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0002791!2.42e-07!33;UBERON:0000468!4.05e-07!659;UBERON:0000062!9.26e-07!511;UBERON:0002037!9.40e-07!6;UBERON:0006215!9.40e-07!6 | |ontology_enrichment_uberon=UBERON:0000475!7.36e-16!365;UBERON:0005743!6.43e-14!86;UBERON:0000955!6.44e-14!69;UBERON:0006238!6.44e-14!69;UBERON:0001017!2.43e-13!82;UBERON:0000073!2.79e-13!94;UBERON:0001016!2.79e-13!94;UBERON:0000481!4.79e-13!347;UBERON:0000033!1.14e-12!123;UBERON:0000153!5.87e-12!129;UBERON:0007811!5.87e-12!129;UBERON:0000064!6.86e-12!219;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0001049!2.33e-10!57;UBERON:0005068!2.33e-10!57;UBERON:0006241!2.33e-10!57;UBERON:0007135!2.33e-10!57;UBERON:0002616!2.46e-10!59;UBERON:0002346!6.51e-10!90;UBERON:0004121!1.11e-09!169;UBERON:0004733!2.63e-09!12;UBERON:0002028!2.63e-09!12;UBERON:0007277!2.63e-09!12;UBERON:0000924!2.88e-09!173;UBERON:0006601!2.88e-09!173;UBERON:0001737!1.93e-08!9;UBERON:0002020!2.68e-08!34;UBERON:0003528!2.68e-08!34;UBERON:0004732!3.00e-08!13;UBERON:0000956!4.17e-08!25;UBERON:0000203!4.17e-08!25;UBERON:0001869!4.50e-08!32;UBERON:0002680!7.83e-08!9;UBERON:0001895!7.83e-08!9;UBERON:0010092!7.83e-08!9;UBERON:0000477!8.02e-08!286;UBERON:0001893!9.31e-08!34;UBERON:0000063!1.38e-07!97;UBERON:0003056!1.71e-07!61;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0002791!2.42e-07!33;UBERON:0000468!4.05e-07!659;UBERON:0000062!9.26e-07!511;UBERON:0002037!9.40e-07!6;UBERON:0006215!9.40e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.94e-15;9!UBERON:0001557;9.94e-15;9!UBERON:0002037;4.55e-14;6!UBERON:0002680;2.87e-12;9!UBERON:0001895;2.87e-12;9!UBERON:0004733;2.45e-11;12!UBERON:0002028;2.45e-11;12!UBERON:0004732;2.43e-10;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.48e-15,9;UBERON:0002037,2.58e-14,6;UBERON:0006215,2.58e-14,6;UBERON:0002680,1.69e-12,9;UBERON:0001895,1.69e-12,9;UBERON:0010092,1.69e-12,9;UBERON:0004733,1.80e-11,12;UBERON:0002028,1.80e-11,12;UBERON:0007277,1.80e-11,12;UBERON:0004732,1.83e-10,13;UBERON:0003076,7.42e-09,15;UBERON:0003057,7.42e-09,15;UBERON:0000073,1.80e-07,53;UBERON:0002616,1.80e-07,53;UBERON:0000955,3.05e-07,68;UBERON:0006238,3.05e-07,68;UBERON:0001049,7.15e-07,56;UBERON:0005068,7.15e-07,56;UBERON:0006241,7.15e-07,56;UBERON:0007135,7.15e-07,56;UBERON:0001017,7.29e-07,81 | |||
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| ||
|short_description=p@chr18:8707629..8707682,- | |short_description=p@chr18:8707629..8707682,- | ||
}} | }} |
Latest revision as of 20:43, 24 September 2015
Short description: | p@chr18:8707629..8707682, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:8707629..8707682, - |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.53e-10 | 7 |
macroglial cell | 2.53e-10 | 7 |
astrocyte | 2.53e-10 | 7 |
oligodendrocyte precursor cell | 2.53e-10 | 7 |
astrocyte of the cerebellum | 2.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.48e-15 | 9 |
cerebellum | 2.58e-14 | 6 |
rhombic lip | 2.58e-14 | 6 |
regional part of metencephalon | 1.69e-12 | 9 |
metencephalon | 1.69e-12 | 9 |
future metencephalon | 1.69e-12 | 9 |
segmental subdivision of hindbrain | 1.80e-11 | 12 |
hindbrain | 1.80e-11 | 12 |
presumptive hindbrain | 1.80e-11 | 12 |
segmental subdivision of nervous system | 1.83e-10 | 13 |
posterior neural tube | 7.42e-09 | 15 |
chordal neural plate | 7.42e-09 | 15 |
regional part of nervous system | 1.80e-07 | 53 |
regional part of brain | 1.80e-07 | 53 |
brain | 3.05e-07 | 68 |
future brain | 3.05e-07 | 68 |
neural tube | 7.15e-07 | 56 |
neural rod | 7.15e-07 | 56 |
future spinal cord | 7.15e-07 | 56 |
neural keel | 7.15e-07 | 56 |
central nervous system | 7.29e-07 | 81 |