FFCP PHASE1:Hg19::chr18:8707629..8707682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:8707629..8707682,- | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_at_chr18:8707629..8707682,- | |description=CAGE_peak_at_chr18:8707629..8707682,- | ||
|id=chr18:8707629..8707682,- | |id=chr18:8707629..8707682,- | ||
|ontology_enrichment_celltype=CL:0000055!9.99e-08!180;CL:0000243!1.32e-07!15;CL:0000125!1.32e-07!15;CL:0000030!1.32e-07!15;CL:0000339!1.32e-07!15;CL:0002620!1.58e-07!23 | |ontology_enrichment_celltype=CL:0000055!9.99e-08!180;CL:0000243!1.32e-07!15;CL:0000125!1.32e-07!15;CL:0000030!1.32e-07!15;CL:0000339!1.32e-07!15;CL:0002620!1.58e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.12e-10;7!CL:0000126;2.12e-10;7!CL:0000127;2.12e-10;7!CL:0002603;3.88e-07;3!CL:0002605;9.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.53e-10,7;CL:0000126,2.53e-10,7;CL:0000127,2.53e-10,7;CL:0002453,2.53e-10,7;CL:0002603,2.22e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.21e-08;3!UBERON:0008947;4.46e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.36e-16!365;UBERON:0005743!6.43e-14!86;UBERON:0000955!6.44e-14!69;UBERON:0006238!6.44e-14!69;UBERON:0001017!2.43e-13!82;UBERON:0000073!2.79e-13!94;UBERON:0001016!2.79e-13!94;UBERON:0000481!4.79e-13!347;UBERON:0000033!1.14e-12!123;UBERON:0000153!5.87e-12!129;UBERON:0007811!5.87e-12!129;UBERON:0000064!6.86e-12!219;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0001049!2.33e-10!57;UBERON:0005068!2.33e-10!57;UBERON:0006241!2.33e-10!57;UBERON:0007135!2.33e-10!57;UBERON:0002616!2.46e-10!59;UBERON:0002346!6.51e-10!90;UBERON:0004121!1.11e-09!169;UBERON:0004733!2.63e-09!12;UBERON:0002028!2.63e-09!12;UBERON:0007277!2.63e-09!12;UBERON:0000924!2.88e-09!173;UBERON:0006601!2.88e-09!173;UBERON:0001737!1.93e-08!9;UBERON:0002020!2.68e-08!34;UBERON:0003528!2.68e-08!34;UBERON:0004732!3.00e-08!13;UBERON:0000956!4.17e-08!25;UBERON:0000203!4.17e-08!25;UBERON:0001869!4.50e-08!32;UBERON:0002680!7.83e-08!9;UBERON:0001895!7.83e-08!9;UBERON:0010092!7.83e-08!9;UBERON:0000477!8.02e-08!286;UBERON:0001893!9.31e-08!34;UBERON:0000063!1.38e-07!97;UBERON:0003056!1.71e-07!61;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0002791!2.42e-07!33;UBERON:0000468!4.05e-07!659;UBERON:0000062!9.26e-07!511;UBERON:0002037!9.40e-07!6;UBERON:0006215!9.40e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.94e-15;9!UBERON:0001557;9.94e-15;9!UBERON:0002037;4.55e-14;6!UBERON:0002680;2.87e-12;9!UBERON:0001895;2.87e-12;9!UBERON:0004733;2.45e-11;12!UBERON:0002028;2.45e-11;12!UBERON:0004732;2.43e-10;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.48e-15,9;UBERON:0002037,2.58e-14,6;UBERON:0006215,2.58e-14,6;UBERON:0002680,1.69e-12,9;UBERON:0001895,1.69e-12,9;UBERON:0010092,1.69e-12,9;UBERON:0004733,1.80e-11,12;UBERON:0002028,1.80e-11,12;UBERON:0007277,1.80e-11,12;UBERON:0004732,1.83e-10,13;UBERON:0003076,7.42e-09,15;UBERON:0003057,7.42e-09,15;UBERON:0000073,1.80e-07,53;UBERON:0002616,1.80e-07,53;UBERON:0000955,3.05e-07,68;UBERON:0006238,3.05e-07,68;UBERON:0001049,7.15e-07,56;UBERON:0005068,7.15e-07,56;UBERON:0006241,7.15e-07,56;UBERON:0007135,7.15e-07,56;UBERON:0001017,7.29e-07,81 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,1.46062018077475,0,1.96993692922861,2.04000691244253,1.56727360739044,1.14494394852423,1.23186982565596,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.661743720148475,0.221729397462564,0.702678285545008,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,1.01304409331664,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0.323745888736263,0,0.61246251376468,0,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0,0.919463387397059,0.150238058906597,0,0.717558542755448,2.56268866582281,2.96704661623387,0.600182192168805,3.60683852334536,2.31876486041066,3.90845398296339,0.168776332241266,0.292311015483596,0.757301322732344,5.24684422261106,0.646584227275248,2.13005755509969,0.503760491138201,0,0,0.272746120590835,0,0.365921118388786,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,13.5080597020506,0,0,1.44375896333917,2.12952240071719,2.69735504124963,1.44606617930089,2.86764329104224,1.74303555273925,0.71181185733329,2.02246962240247,1.56977172100277,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0.201057944823262,0.833296006426766,0,0,2.88662684050547,0.463721619900307,0.70445216541493,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,2.92531928243358,2.08014873822732,0,0,0,0.714889968290738,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0.718874566474748,3.44585807502342,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,1.45579603071565,1.24900292158013,0.473107245101804,0.234282829985426,0.300946099727719,0,2.0694614258501,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0.561320188866147,0,2.04682899626681,0,0,0.308419387605311,0.177561725313127,0.821271560138091,0,0.813472649219715,0,0.200506470303285,0.0920809889358963,0.574072240823034,0.364182336013434,0.262248829918848,0.451199612907412,0,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,2.16757150035082,5.51858751240339,0.254876273045038,0,1.34324852833307,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0,0.445160178233687,0,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.405820753925408,0.6196469961995,0.281695602532241,0.286822704408103,0.294747123039363,0.35667105148125,0.354761064070598,1.05553817648832,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0.994147647766298,1.26602474769461,0.222617410045812,0,0,0,0,0,0.818149460017238,0,0,0.898683511473268,1.25314822272926,0,0,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,16.3107500419876,0.344743373241465,0,0,0,0.723578631752448,6.10326945268333,12.8271941520221,28.3725714195406,1.09692698576986,0.980446171670911,0.139423744278603,0.615602068030377,0.341826167541004,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,2.95397290339238,0,0,1.08194319871046,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,2.37191225980366,0,1.21390189767046,0,0,0.30607276163049,0,1.05226393590145,0.933193722575224,0.664653872707185,1.65495977937749,0.627865836814451,0,0.284609546029793,0,0,0.0979923974143777,0.435296032902013,0.34945333648406,2.40780445460263,0.0967563312890851,0.146178634172371,0,0,0,0.90392296312213,0.685209623233754,0,0.569797163602908,0,0,2.98834192635094,0,0,0,0,2.16082196982225,0.372757606696298,0.471388069233591,1.08723364858891,1.255234155748,0.713987523454252,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885847333632739,0,0,0.408610218334727,0.482259445395058,0,1.66176135211674,0,0,0.789744236554321,0,0.0788057072991982,0,0.316801009558219,1.07572403599707,0.575745591958336,0,0,0,0.542999601753713,0,1.63293680054705,1.19730191562487,0,0.511164065356265,0,0,0,0.129282956361551,0.52893040697076,2.05304205461195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.751145584238999,0.573409195690071,1.22021956690538,0.620964029413834,0.138348634936231,0.37494122388632,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0.378806010550178,0,1.77962244319307,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.10741055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| ||
|short_description=p@chr18:8707629..8707682,- | |short_description=p@chr18:8707629..8707682,- | ||
}} | }} |
Latest revision as of 20:43, 24 September 2015
Short description: | p@chr18:8707629..8707682, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:8707629..8707682, - |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.53e-10 | 7 |
macroglial cell | 2.53e-10 | 7 |
astrocyte | 2.53e-10 | 7 |
oligodendrocyte precursor cell | 2.53e-10 | 7 |
astrocyte of the cerebellum | 2.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.48e-15 | 9 |
cerebellum | 2.58e-14 | 6 |
rhombic lip | 2.58e-14 | 6 |
regional part of metencephalon | 1.69e-12 | 9 |
metencephalon | 1.69e-12 | 9 |
future metencephalon | 1.69e-12 | 9 |
segmental subdivision of hindbrain | 1.80e-11 | 12 |
hindbrain | 1.80e-11 | 12 |
presumptive hindbrain | 1.80e-11 | 12 |
segmental subdivision of nervous system | 1.83e-10 | 13 |
posterior neural tube | 7.42e-09 | 15 |
chordal neural plate | 7.42e-09 | 15 |
regional part of nervous system | 1.80e-07 | 53 |
regional part of brain | 1.80e-07 | 53 |
brain | 3.05e-07 | 68 |
future brain | 3.05e-07 | 68 |
neural tube | 7.15e-07 | 56 |
neural rod | 7.15e-07 | 56 |
future spinal cord | 7.15e-07 | 56 |
neural keel | 7.15e-07 | 56 |
central nervous system | 7.29e-07 | 81 |