FFCP PHASE1:Hg19::chr20:2361545..2361557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=343641 | |EntrezGene=343641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16255 | |HGNC=16255 | ||
|TSSclassifier=strong | |||
|UniProt=O95932 | |UniProt=O95932 | ||
|association_with_transcript=0bp_to_ENST00000202625,ENST00000381423,NM_001254734,NM_198994,uc002wfy.1,uc010gal.1_5end | |association_with_transcript=0bp_to_ENST00000202625,ENST00000381423,NM_001254734,NM_198994,uc002wfy.1,uc010gal.1_5end | ||
|cluster_id=chr20:2361545..2361557,+ | |||
|coexpression_cluster_id=C263 | |coexpression_cluster_id=C263 | ||
|description=CAGE_peak_1_at_TGM6_5end | |description=CAGE_peak_1_at_TGM6_5end | ||
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|ontology_enrichment_celltype=CL:0000764!2.37e-15!2;CL:0000765!2.37e-15!2;CL:0000050!2.37e-15!2;CL:0000038!2.37e-15!2;CL:0000558!2.37e-15!2;CL:0000547!2.37e-15!2;CL:0000549!2.37e-15!2;CL:0000550!2.37e-15!2;CL:0000552!2.37e-15!2 | |ontology_enrichment_celltype=CL:0000764!2.37e-15!2;CL:0000765!2.37e-15!2;CL:0000050!2.37e-15!2;CL:0000038!2.37e-15!2;CL:0000558!2.37e-15!2;CL:0000547!2.37e-15!2;CL:0000549!2.37e-15!2;CL:0000550!2.37e-15!2;CL:0000552!2.37e-15!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4362!4.79e-07!5 | |ontology_enrichment_disease=DOID:4362!4.79e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001723!1.49e-38!3;UBERON:0001033!1.49e-38!3;UBERON:0010056!1.49e-38!3;UBERON:0002372!9.99e-30!1;UBERON:0001961!9.99e-30!1;UBERON:0001744!9.99e-30!1;UBERON:0001735!9.99e-30!1;UBERON:0007029!2.37e-29!1;UBERON:0001042!3.30e-26!10;UBERON:0009145!3.30e-26!10;UBERON:0006562!6.61e-24!11;UBERON:0000078!6.22e-15!18;UBERON:0001557!3.46e-14!19;UBERON:0000166!6.58e-13!21;UBERON:0000165!7.35e-10!28;UBERON:0000930!7.35e-10!28;UBERON:0008814!1.47e-08!15;UBERON:0000014!2.26e-08!4;UBERON:0000161!5.08e-08!35 | |ontology_enrichment_uberon=UBERON:0001723!1.49e-38!3;UBERON:0001033!1.49e-38!3;UBERON:0010056!1.49e-38!3;UBERON:0002372!9.99e-30!1;UBERON:0001961!9.99e-30!1;UBERON:0001744!9.99e-30!1;UBERON:0001735!9.99e-30!1;UBERON:0007029!2.37e-29!1;UBERON:0001042!3.30e-26!10;UBERON:0009145!3.30e-26!10;UBERON:0006562!6.61e-24!11;UBERON:0000078!6.22e-15!18;UBERON:0001557!3.46e-14!19;UBERON:0000166!6.58e-13!21;UBERON:0000165!7.35e-10!28;UBERON:0000930!7.35e-10!28;UBERON:0008814!1.47e-08!15;UBERON:0000014!2.26e-08!4;UBERON:0000161!5.08e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;2.32e-07;33!UBERON:0003100;2.32e-07;41!UBERON:0000474;2.32e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;2.32e-07;33!UBERON:0003100;2.32e-07;41!UBERON:0000474;2.32e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p1@TGM6 | |short_description=p1@TGM6 | ||
}} | }} |
Latest revision as of 20:37, 24 September 2015
Short description: | p1@TGM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGM6_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | 0bp_to_ENST00000202625, ENST00000381423, NM_001254734, NM_198994, uc002wfy.1, uc010gal.1_5end |
EntrezGene: | TGM6 |
HGNC: | 16255 |
UniProt: | O95932 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |