FFCP PHASE1:Hg19::chr11:10476928..10476969,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:10476928..10476969,+ to FFCP PHASE1:Hg19::chr11:10476928..10476969,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=272 | |EntrezGene=272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=470 | |HGNC=470 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKC5 | |UniProt=E9PKC5 | ||
|association_with_transcript=0bp_to_ENST00000529834_5end | |||
|cluster_id=chr11:10476928..10476969,+ | |||
|description=CAGE_peak_3_at_AMPD3_5end | |||
|id=chr11:10476928..10476969,+ | |||
|ontology_enrichment_celltype=CL:0000680!5.21e-10!57;CL:0000056!5.21e-10!57;CL:0000355!5.21e-10!57;CL:0000187!4.47e-09!54;CL:0000183!4.49e-09!59;CL:0000192!8.40e-08!42;CL:0000514!8.40e-08!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.03e-09,58;CL:0000056,5.03e-09,58;CL:0000355,5.03e-09,58;CL:0000187,5.08e-08,55;CL:0000192,2.43e-07,43;CL:0000514,2.43e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.07e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.04e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.68e-12!82;UBERON:0000914!1.88e-11!83;UBERON:0002329!1.88e-11!83;UBERON:0003077!1.88e-11!83;UBERON:0003059!1.88e-11!83;UBERON:0007282!1.88e-11!83;UBERON:0009618!1.88e-11!83;UBERON:0007285!1.88e-11!83;UBERON:0004290!3.98e-11!70;UBERON:0001134!6.68e-10!61;UBERON:0002036!6.68e-10!61;UBERON:0003082!6.68e-10!61;UBERON:0002385!1.87e-09!63;UBERON:0001015!1.87e-09!63;UBERON:0000383!1.87e-09!63;UBERON:0000475!2.66e-08!365;UBERON:0002050!8.54e-08!605;UBERON:0005423!8.54e-08!605;UBERON:0000923!1.03e-07!604;UBERON:0005291!1.03e-07!604;UBERON:0006598!1.03e-07!604;UBERON:0002532!1.03e-07!604;UBERON:0000467!1.07e-07!625;UBERON:0000480!1.13e-07!626;UBERON:0000922!1.61e-07!612;UBERON:0005256!4.66e-07!143;UBERON:0002204!6.16e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.20e-07;31!UBERON:0001015;4.20e-07;31!UBERON:0000383;4.20e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,4.24e-11,83;UBERON:0002329,3.78e-10,71;UBERON:0003059,3.78e-10,71;UBERON:0007282,3.78e-10,71;UBERON:0004290,3.78e-10,71;UBERON:0009618,3.78e-10,71;UBERON:0003077,9.05e-10,72;UBERON:0007285,9.05e-10,72;UBERON:0007524,2.10e-09,73;UBERON:0001134,2.67e-09,62;UBERON:0002036,2.67e-09,62;UBERON:0003082,2.67e-09,62;UBERON:0007503,5.31e-09,78;UBERON:0002385,1.53e-08,64;UBERON:0001015,1.53e-08,64;UBERON:0000383,1.53e-08,64 | |||
|phase1_expression=0,0,1.26858963686374,1.0007329835313,0,0,0,7.58063848112197,0,3.44027511102112,1.39560233594486,2.62129646556207,2.63766978228454,2.72285976512103,0.994192127183747,10.7572023432284,16.2727522566474,10.2243412654232,11.7103871709722,0.738726348460727,1.22400414746552,0,0.286235987131057,0.273748850145768,0,1.75750833220288,1.80621296789881,1.57421562627358,0,0.383829398097213,0.154816123316076,3.67768489791571,3.31326510656075,1.10926203050036,0,0.284338464974843,0.293600439334847,3.32397245119126,5.01361118675354,1.30206522429511,0.223915474239924,0.32389366601898,0,0.581592955118259,0.755751887377619,1.21292030593908,1.62700325833979,3.70051099219643,4.64559556342655,0.863077176966451,1.5369642391746,0.236482229888585,1.03423704220986,4.51839278508678,2.70852973188684,1.12945403725563,3.27487380069415,2.47195832889593,0,5.1348644332175,4.47535988059329,0.659702600373432,0.598390972864896,0,4.93355705668593,20.9932533135722,11.2108004819203,0,1.0429658368404,0.217188844705117,2.42159801053347,13.6262725315399,7.59509729858123,0,0,0,0,0,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0,0.795285947051099,3.89307896242109,0.661743720148475,0.665188192387692,0.527008714158756,0.458426764241994,5.82872461268068,4.07862887062872,0.649094787309367,0.870648686496336,0.930705723632056,0,0,0,0,1.72046919021225,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0.805658634218294,1.52054421143703,0,0,0,0,0,0,0,0,0,1.31780417436063,0,2.18047026071267,0.993943903390637,0.379891534993739,10.4603252842443,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.404132016209064,1.30769522490767,1.36221684880438,0.576175924479999,1.87457145467037,4.05808099879417,1.1409436430889,2.09228152772521,0.469737994575059,1.13311061057692,0.842704840213491,1.42907919878425,2.33385202892359,0.723280468230358,1.18800285728205,1.7308685049499,8.19145225744224,2.15585442544872,2.02003336744879,1.00094815897571,2.21651292387346,0,0,3.30523729594513,0,0.179389635688862,0.213557388818567,0.635795703478686,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0.675105328965065,0.194874010322397,3.28163906517349,0.276149695926898,0,0.710019185033229,0.503760491138201,0.67824236924195,3.09217365061275,1.90922284413584,2.58124135850103,0,0,0.232387885739037,0.310983165046111,1.26160425437814,0.72995471815166,12.5159625863853,1.28648187638577,4.14404764057442,1.39310378409594,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,1.59884970106048,3.08822058537346,2.52425656439839,4.49607013030478,1.20634766893957,1.94435734832912,0,3.11980435583874,1.44331342025273,2.31860809950154,0.352226082707465,0.866198686566443,0,0,0,0,2.21595305478658,13.1042388477973,6.09387765383786,3.74935335947108,2.01578553838631,2.69372684760534,0.0895585227028483,0,0,0,0,1.03664057770386,0.144119953416961,0.50496973370552,0.126995788584338,0,0,0,0,0,0,6.2793407233402,2.1798003441664,3.44689943358465,6.59285750364667,0,1.690605505112,4.25500986535793,7.28052058379563,0.771622122786426,2.83698264046557,1.5985330740966,0.857867961948885,0.542621605391443,0,0,1.77695974371273,3.16780749173372,9.04318131178758,10.4584015032035,2.7992437530976,0,1.00451418286425,2.10833939483032,0.479249710983165,0,2.85273810081437,1.73737568001095,4.72595541865882,4.83464600747718,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,2.00068208423871,2.44138521329762,1.66376689224646,3.7470087647404,0.473107245101804,1.05427273493442,0.902838299183157,0,0,0,0,1.91143951829782,4.69922777910577,1.02943027143257,0,0.431428401637234,0.426910231213777,1.21251028578504,0,2.72151263996712,1.48864684691266,1.07423381301644,0,1.66580894032411,0,0.160853921143607,0,2.7757744884478,3.37367278094941,2.62806899244189,7.2695620085707,3.02146983995894,0.966875596732978,3.40860999515584,0.552485933615378,2.06666006696292,2.36718518408732,3.14698595902618,0.902399225814824,1.38627606787947,4.70609861506113,2.92278449306521,1.37217117560738,0,0,0.863663664408557,0,2.16757150035082,1.00337954770971,1.01950509218015,1.66215201785745,1.34324852833307,1.09629938322967,1.8300481571743,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,0,0,6.3169209179579,3.25030123018261,1.6068392984416,3.28680442193215,2.7728751080636,2.76306614507033,4.13509717453592,2.57808587683857,2.17525040871343,1.96021243057032,0.979352392114111,3.47098322258054,1.53752053892085,5.48734663726712,1.4162089319777,1.85938219718914,4.7221852024596,0.6970372701606,2.46426864140871,5.32306030317022,1.73986598415015,2.96518750566272,1.00187420719394,0.372158369359667,0,0.953150969619124,2.81487570442467,0,6.0458617105928,5.49464048139461,3.95719406683292,2.74537029736055,1.64937363283961,6.67202189191943,0,6.7401352998237,2.43816869544795,13.6479554193519,5.28250733783777,2.32049849393576,2.82810863907426,0,1.65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| ||
|short_description=p3@AMPD3 | |||
}} | }} |
Latest revision as of 20:28, 24 September 2015
Short description: | p3@AMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529834_5end |
EntrezGene: | AMPD3 |
HGNC: | 470 |
UniProt: | E9PKC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.03e-09 | 58 |
myoblast | 5.03e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.03e-09 | 58 |
muscle cell | 5.08e-08 | 55 |
smooth muscle cell | 2.43e-07 | 43 |
smooth muscle myoblast | 2.43e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 4.24e-11 | 83 |
somite | 3.78e-10 | 71 |
presomitic mesoderm | 3.78e-10 | 71 |
presumptive segmental plate | 3.78e-10 | 71 |
dermomyotome | 3.78e-10 | 71 |
trunk paraxial mesoderm | 3.78e-10 | 71 |
paraxial mesoderm | 9.05e-10 | 72 |
presumptive paraxial mesoderm | 9.05e-10 | 72 |
dense mesenchyme tissue | 2.10e-09 | 73 |
skeletal muscle tissue | 2.67e-09 | 62 |
striated muscle tissue | 2.67e-09 | 62 |
myotome | 2.67e-09 | 62 |
epithelial vesicle | 5.31e-09 | 78 |
muscle tissue | 1.53e-08 | 64 |
musculature | 1.53e-08 | 64 |
musculature of body | 1.53e-08 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.04e-09 | 14 |