FFCP PHASE1:Hg19::chr2:220173685..220173698,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5798 | |EntrezGene=5798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9676 | |HGNC=9676 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZS3 | |UniProt=F5GZS3 | ||
|association_with_transcript=7bp_to_ENST00000537666,uc010zlc.1_5end | |association_with_transcript=7bp_to_ENST00000537666,uc010zlc.1_5end | ||
|cluster_id=chr2:220173685..220173698,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_PTPRN_5end | |description=CAGE_peak_3_at_PTPRN_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.07e-14;1!CL:0002591;8.55e-14;1 | |ontology_enrichment_celltype_v019=CL:0002553;3.07e-14;1!CL:0002591;8.55e-14;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.08e-14,1;CL:0002591,1.61e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.56e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.56e-08;82 | ||
|ontology_enrichment_disease=DOID:169!2.13e-07!6 | |ontology_enrichment_disease=DOID:169!2.13e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.27e-60!57;UBERON:0005068!3.27e-60!57;UBERON:0006241!3.27e-60!57;UBERON:0007135!3.27e-60!57;UBERON:0002616!1.02e-54!59;UBERON:0000955!8.79e-53!69;UBERON:0006238!8.79e-53!69;UBERON:0000073!2.89e-51!94;UBERON:0001016!2.89e-51!94;UBERON:0001017!2.39e-50!82;UBERON:0005743!6.65e-50!86;UBERON:0002780!1.63e-48!41;UBERON:0001890!1.63e-48!41;UBERON:0006240!1.63e-48!41;UBERON:0003075!3.10e-48!86;UBERON:0007284!3.10e-48!86;UBERON:0003080!3.47e-47!42;UBERON:0002346!1.38e-45!90;UBERON:0001893!6.41e-40!34;UBERON:0002020!7.02e-40!34;UBERON:0003528!7.02e-40!34;UBERON:0002791!1.45e-37!33;UBERON:0001869!8.07e-36!32;UBERON:0007023!1.65e-35!115;UBERON:0003056!1.10e-34!61;UBERON:0000033!1.70e-33!123;UBERON:0002619!5.41e-32!22;UBERON:0000153!2.13e-31!129;UBERON:0007811!2.13e-31!129;UBERON:0004121!7.68e-29!169;UBERON:0000924!6.99e-28!173;UBERON:0006601!6.99e-28!173;UBERON:0000956!9.65e-28!25;UBERON:0000203!9.65e-28!25;UBERON:0001950!2.36e-27!20;UBERON:0000025!3.89e-17!194;UBERON:0000200!7.78e-17!6;UBERON:0002298!1.33e-16!8;UBERON:0004733!3.67e-14!12;UBERON:0002028!3.67e-14!12;UBERON:0007277!3.67e-14!12;UBERON:0003076!1.01e-13!15;UBERON:0003057!1.01e-13!15;UBERON:0002308!1.38e-13!9;UBERON:0000125!1.38e-13!9;UBERON:0004732!5.96e-13!13;UBERON:0004111!2.29e-12!241;UBERON:0001871!5.02e-12!7;UBERON:0000483!1.31e-11!309;UBERON:0000119!2.25e-11!312;UBERON:0000475!2.57e-10!365;UBERON:0001872!4.31e-10!5;UBERON:0002420!4.77e-10!9;UBERON:0007245!4.77e-10!9;UBERON:0010009!4.77e-10!9;UBERON:0010011!4.77e-10!9;UBERON:0000454!4.77e-10!9;UBERON:0000477!4.82e-10!286;UBERON:0001894!7.76e-10!7;UBERON:0006222!7.76e-10!7;UBERON:0001896!2.00e-09!3;UBERON:0005290!2.00e-09!3;UBERON:0010096!2.00e-09!3;UBERON:0000988!2.24e-09!3;UBERON:0000349!2.40e-09!5;UBERON:0009663!4.05e-09!7;UBERON:0000064!6.28e-09!219;UBERON:0002771!7.66e-09!3;UBERON:0006331!1.21e-08!3;UBERON:0002680!9.24e-08!9;UBERON:0001895!9.24e-08!9;UBERON:0010092!9.24e-08!9;UBERON:0003296!3.44e-07!4;UBERON:0010133!3.44e-07!4;UBERON:0001870!5.46e-07!2;UBERON:0001905!5.95e-07!2;UBERON:0002757!5.95e-07!2;UBERON:0010134!5.95e-07!2;UBERON:0002784!5.95e-07!2;UBERON:0005408!5.95e-07!2;UBERON:0001899!5.95e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!3.27e-60!57;UBERON:0005068!3.27e-60!57;UBERON:0006241!3.27e-60!57;UBERON:0007135!3.27e-60!57;UBERON:0002616!1.02e-54!59;UBERON:0000955!8.79e-53!69;UBERON:0006238!8.79e-53!69;UBERON:0000073!2.89e-51!94;UBERON:0001016!2.89e-51!94;UBERON:0001017!2.39e-50!82;UBERON:0005743!6.65e-50!86;UBERON:0002780!1.63e-48!41;UBERON:0001890!1.63e-48!41;UBERON:0006240!1.63e-48!41;UBERON:0003075!3.10e-48!86;UBERON:0007284!3.10e-48!86;UBERON:0003080!3.47e-47!42;UBERON:0002346!1.38e-45!90;UBERON:0001893!6.41e-40!34;UBERON:0002020!7.02e-40!34;UBERON:0003528!7.02e-40!34;UBERON:0002791!1.45e-37!33;UBERON:0001869!8.07e-36!32;UBERON:0007023!1.65e-35!115;UBERON:0003056!1.10e-34!61;UBERON:0000033!1.70e-33!123;UBERON:0002619!5.41e-32!22;UBERON:0000153!2.13e-31!129;UBERON:0007811!2.13e-31!129;UBERON:0004121!7.68e-29!169;UBERON:0000924!6.99e-28!173;UBERON:0006601!6.99e-28!173;UBERON:0000956!9.65e-28!25;UBERON:0000203!9.65e-28!25;UBERON:0001950!2.36e-27!20;UBERON:0000025!3.89e-17!194;UBERON:0000200!7.78e-17!6;UBERON:0002298!1.33e-16!8;UBERON:0004733!3.67e-14!12;UBERON:0002028!3.67e-14!12;UBERON:0007277!3.67e-14!12;UBERON:0003076!1.01e-13!15;UBERON:0003057!1.01e-13!15;UBERON:0002308!1.38e-13!9;UBERON:0000125!1.38e-13!9;UBERON:0004732!5.96e-13!13;UBERON:0004111!2.29e-12!241;UBERON:0001871!5.02e-12!7;UBERON:0000483!1.31e-11!309;UBERON:0000119!2.25e-11!312;UBERON:0000475!2.57e-10!365;UBERON:0001872!4.31e-10!5;UBERON:0002420!4.77e-10!9;UBERON:0007245!4.77e-10!9;UBERON:0010009!4.77e-10!9;UBERON:0010011!4.77e-10!9;UBERON:0000454!4.77e-10!9;UBERON:0000477!4.82e-10!286;UBERON:0001894!7.76e-10!7;UBERON:0006222!7.76e-10!7;UBERON:0001896!2.00e-09!3;UBERON:0005290!2.00e-09!3;UBERON:0010096!2.00e-09!3;UBERON:0000988!2.24e-09!3;UBERON:0000349!2.40e-09!5;UBERON:0009663!4.05e-09!7;UBERON:0000064!6.28e-09!219;UBERON:0002771!7.66e-09!3;UBERON:0006331!1.21e-08!3;UBERON:0002680!9.24e-08!9;UBERON:0001895!9.24e-08!9;UBERON:0010092!9.24e-08!9;UBERON:0003296!3.44e-07!4;UBERON:0010133!3.44e-07!4;UBERON:0001870!5.46e-07!2;UBERON:0001905!5.95e-07!2;UBERON:0002757!5.95e-07!2;UBERON:0010134!5.95e-07!2;UBERON:0002784!5.95e-07!2;UBERON:0005408!5.95e-07!2;UBERON:0001899!5.95e-07!2 | ||
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|short_description=p3@PTPRN | |short_description=p3@PTPRN | ||
}} | }} |
Latest revision as of 20:22, 24 September 2015
Short description: | p3@PTPRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 7bp_to_ENST00000537666, uc010zlc.1_5end |
EntrezGene: | PTPRN |
HGNC: | 9676 |
UniProt: | F5GZS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.08e-14 | 1 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |