FFCP PHASE1:Hg19::chr11:10476661..10476742,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:10476661..10476742,+
|short_description=p4@AMPD3
|description=CAGE_peak_4_at_AMPD3_5end
|association_with_transcript=0bp_to_NM_001025389,uc001mio.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=272 | |EntrezGene=272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=470 | |HGNC=470 | ||
|TSSclassifier=strong | |||
|UniProt=Q01432 | |UniProt=Q01432 | ||
|association_with_transcript=0bp_to_NM_001025389,uc001mio.1_5end | |||
|cluster_id=chr11:10476661..10476742,+ | |||
|description=CAGE_peak_4_at_AMPD3_5end | |||
|id=chr11:10476661..10476742,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.58e-13!591;CL:0000548!3.24e-12!679;CL:0000004!3.24e-12!679;CL:0000255!3.24e-12!679;CL:0000680!4.54e-12!57;CL:0000056!4.54e-12!57;CL:0000355!4.54e-12!57;CL:0000012!1.59e-11!682;CL:0000144!2.55e-11!625;CL:0000183!4.46e-11!59;CL:0000187!6.82e-11!54;CL:0000220!9.96e-11!246;CL:0000192!2.01e-10!42;CL:0000514!2.01e-10!42;CL:0002321!3.19e-10!248;CL:0000055!3.73e-10!180;CL:0000359!1.10e-08!32;CL:0000057!1.59e-08!75;CL:0000393!3.17e-08!60;CL:0000211!3.17e-08!60;CL:0000222!1.61e-07!119;CL:0002368!5.60e-07!13;CL:0000003!6.25e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-11;33!CL:0002057;1.14e-11;33!CL:0000473;1.01e-09;39!CL:0000234;1.01e-09;39!CL:0000359;8.48e-09;32!CL:0002368;5.68e-08;13!CL:0000192;1.06e-07;43!CL:0002539;4.12e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.52e-12,58;CL:0000056,3.52e-12,58;CL:0000355,3.52e-12,58;CL:0000187,8.00e-11,55;CL:0000192,3.08e-10,43;CL:0000514,3.08e-10,43;CL:0002321,1.79e-09,250;CL:0000359,5.56e-09,32;CL:0000393,2.01e-08,61;CL:0000211,2.01e-08,61;CL:0002368,3.17e-08,13;CL:0000473,6.74e-08,48;CL:0000234,6.74e-08,48;CL:0000860,2.90e-07,42;CL:0002057,2.90e-07,42;CL:0002539,4.02e-07,10;CL:0000057,5.39e-07,76;CL:0000222,5.42e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.06e-07;43!CL:0000355;6.62e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.51e-19!82;UBERON:0000914!5.78e-17!83;UBERON:0002329!5.78e-17!83;UBERON:0003077!5.78e-17!83;UBERON:0003059!5.78e-17!83;UBERON:0007282!5.78e-17!83;UBERON:0009618!5.78e-17!83;UBERON:0007285!5.78e-17!83;UBERON:0000467!3.69e-16!625;UBERON:0000480!3.96e-16!626;UBERON:0004290!1.28e-15!70;UBERON:0002100!1.35e-15!216;UBERON:0005256!1.95e-15!143;UBERON:0000475!1.01e-14!365;UBERON:0000468!1.50e-13!659;UBERON:0001134!2.78e-13!61;UBERON:0002036!2.78e-13!61;UBERON:0003082!2.78e-13!61;UBERON:0002385!5.62e-13!63;UBERON:0001015!5.62e-13!63;UBERON:0000383!5.62e-13!63;UBERON:0002204!3.22e-12!167;UBERON:0000926!4.58e-12!448;UBERON:0004120!4.58e-12!448;UBERON:0006603!4.58e-12!448;UBERON:0002050!1.21e-10!605;UBERON:0005423!1.21e-10!605;UBERON:0000923!1.24e-10!604;UBERON:0005291!1.24e-10!604;UBERON:0006598!1.24e-10!604;UBERON:0002532!1.24e-10!604;UBERON:0003102!1.45e-10!95;UBERON:0003104!2.40e-10!238;UBERON:0009142!2.40e-10!238;UBERON:0000922!1.23e-09!612;UBERON:0000490!9.01e-09!138;UBERON:0000062!9.91e-08!511;UBERON:0000119!5.19e-07!312;UBERON:0000481!8.41e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.57e-11;31!UBERON:0001015;4.57e-11;31!UBERON:0000383;4.57e-11;31!UBERON:0004237;4.12e-07;10!UBERON:0004695;4.12e-07;10!UBERON:0002111;4.12e-07;10!UBERON:0004178;4.12e-07;10!UBERON:0004573;6.37e-07;33!UBERON:0004571;6.37e-07;33 | |||
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|phase1_expression=1.45342703416445,1.07050261945492,2.81908808191942,1.0007329835313,0.446961094427288,0,0,3.15859936713415,0.522371256399677,1.72013755551056,2.09340350391728,3.9319446983431,2.63766978228454,1.98026164736075,0.662794751455832,5.3786011716142,7.23233433628772,2.92124036154949,4.39139518911456,0.61560529038394,1.22400414746552,0,0,0.273748850145768,0,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0.154816123316076,4.59710612239464,6.32532429434325,15.5296684270051,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,3.05336301437086,7.935394817465,4.12392904019288,4.18372266430232,6.16751832032739,3.71647645074124,1.43846196161075,4.86705342405291,2.12834006899727,3.10271112662957,6.45484683583826,4.06279459783025,3.20011977222428,11.7349644524874,3.14612878223118,3.67300670845083,4.8139354061414,3.83602275479425,0.659702600373432,3.39088217956774,1.70489900213078,4.06292934080018,5.6738522469114,6.85104473895132,2.00998932205395,8.34372669472322,2.38907729175628,3.63239701580021,4.41933163185078,4.1140110367315,0,0,0,0.22465726229299,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0.795285947051099,0,0.945348171640679,0.221729397462564,0.351339142772504,0.130979075497713,9.10738220731355,4.82019775619758,0.324547393654683,0.348259474598534,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0.516833518338658,1.77883131343355,0,0.805658634218294,0.760272105718513,3.41686880567437,0,0,0.17859945656816,0.673588117878509,0,0,0,0,1.31780417436063,0,7.84969293856562,3.47880366186723,0.12663051166458,12.8436905388822,1.43418310374407,1.06400514659507,0.560677600142307,1.06748995729705,0,0,0.538842688278752,0,1.36221684880438,1.72852777344,1.40592859100278,3.43376084513353,3.99330275081114,3.73621701379503,2.23125547423153,1.94247533241758,1.26405726032024,3.26646674007829,1.96534907698829,0.723280468230358,1.18800285728205,0.989067717114227,4.55080680969013,2.15585442544872,3.53505839303539,2.62748891731125,2.77064115484183,1.31693286264251,0.30648779579902,0.600952235626387,0.226864366320042,5.02290979928813,0.427114777637135,2.33125091275518,3.30100205692843,1.33968288009971,5.15281080091258,1.67505170698431,1.35021065793013,0.974370051611986,10.6022185182528,2.48534726334208,1.13152239773168,3.90510551768276,1.30977727695932,0.67824236924195,6.95739071387869,7.0913991353617,6.02289650316908,0,0,0,0,0,0,7.8224766164908,1.92972281457866,1.38134921352481,0.464367928031979,2.16563844500876,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,2.94017422771084,0,0,0.590789906681404,0,0.860919069801795,3.08822058537346,9.32877425973317,7.86812272803337,5.83068039987459,3.24059558054854,0.651616610620649,0,1.44331342025273,2.31860809950154,0.352226082707465,2.7429625074604,2.77791307545966,0,0,0,1.23108503043699,0.936017060556951,2.82399208348584,4.68669169933885,6.71928512795438,6.94697976487694,2.05984602216551,2.3250715081117,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,2.35475277125258,4.3596006883328,2.6401782895542,0.904902010304444,0,0.845302752556,5.05282421511254,2.08014873822732,0.771622122786426,1.41849132023278,0.799266537048298,1.14382394926518,1.08524321078289,0,0.977208552881205,0.710783897485092,0,11.1532569512047,14.816068796205,9.09754219756719,1.2162378064119,1.50677127429638,4.21667878966063,0.958499421966331,0,2.85273810081437,5.64647096003559,4.9314317412092,3.04403637507822,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0.749007023947182,0,0,1.47229790062968,1.00034104211935,0.813795071099207,7.69492187663986,6.24501460790066,3.46945313074656,4.4513737697231,0,0,0,0,0.553107505625109,2.60650843404249,1.95801157462741,1.37257369524342,0,0.215714200818617,0,1.21251028578504,0,0,4.46594054073798,3.52962538562544,0.280660094433074,4.61300937320523,2.55853624533352,1.76939313257968,2.96836132889982,2.7757744884478,1.06537035187876,2.38168752440047,2.07701771673448,2.20799719073923,0,5.01266175758212,11.2338806501794,1.49258782613989,3.09554985611419,3.14698595902618,0.902399225814824,1.84836809050595,0,0,2.32213583564327,2.27466768141793,0.680374821106063,0.215915916102139,1.54227252690289,1.62567862526312,0.501689773854853,2.80363900349542,3.3243040357149,1.56712328305525,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.103041011647722,0,0,10.9110452219273,2.60024098414608,8.03419649220798,8.70036464629098,0.770243085573222,1.68854042198743,1.51620229732984,3.86712881525785,1.74020032697074,3.66474497889234,2.40386496246191,6.94196644516108,2.11409074101617,10.3366297120613,3.33820676823315,4.64845549297286,14.4813679542094,3.485186350803,3.08033580176089,3.19383618190213,6.95946393660058,2.03856641014312,1.14499909393593,0.744316738719335,0,0.762520775695299,1.02359116524534,0.42793898803392,3.5002357271853,3.13979456079692,3.59744915166629,3.56898138656871,3.41655966802491,2.02182481573316,1.58510321173008,4.212584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| ||
|short_description=p4@AMPD3 | |||
}} | }} |
Latest revision as of 20:21, 24 September 2015
Short description: | p4@AMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AMPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001025389, uc001mio.1_5end |
EntrezGene: | AMPD3 |
HGNC: | 470 |
UniProt: | Q01432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.52e-12 | 58 |
myoblast | 3.52e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.52e-12 | 58 |
muscle cell | 8.00e-11 | 55 |
smooth muscle cell | 3.08e-10 | 43 |
smooth muscle myoblast | 3.08e-10 | 43 |
embryonic cell | 1.79e-09 | 250 |
vascular associated smooth muscle cell | 5.56e-09 | 32 |
electrically responsive cell | 2.01e-08 | 61 |
electrically active cell | 2.01e-08 | 61 |
respiratory epithelial cell | 3.17e-08 | 13 |
defensive cell | 6.74e-08 | 48 |
phagocyte | 6.74e-08 | 48 |
classical monocyte | 2.90e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-07 | 42 |
aortic smooth muscle cell | 4.02e-07 | 10 |
fibroblast | 5.39e-07 | 76 |
mesodermal cell | 5.42e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 6.81e-20 | 83 |
somite | 2.12e-16 | 71 |
presomitic mesoderm | 2.12e-16 | 71 |
presumptive segmental plate | 2.12e-16 | 71 |
dermomyotome | 2.12e-16 | 71 |
trunk paraxial mesoderm | 2.12e-16 | 71 |
paraxial mesoderm | 6.96e-16 | 72 |
presumptive paraxial mesoderm | 6.96e-16 | 72 |
epithelial vesicle | 1.04e-15 | 78 |
dense mesenchyme tissue | 2.19e-15 | 73 |
skeletal muscle tissue | 1.32e-13 | 62 |
striated muscle tissue | 1.32e-13 | 62 |
myotome | 1.32e-13 | 62 |
musculoskeletal system | 2.72e-13 | 167 |
muscle tissue | 1.21e-12 | 64 |
musculature | 1.21e-12 | 64 |
musculature of body | 1.21e-12 | 64 |
trunk | 4.52e-12 | 199 |
trunk mesenchyme | 3.26e-11 | 122 |
surface structure | 1.05e-10 | 99 |
unilaminar epithelium | 1.45e-09 | 148 |
mesoderm | 3.45e-08 | 315 |
mesoderm-derived structure | 3.45e-08 | 315 |
presumptive mesoderm | 3.45e-08 | 315 |
systemic artery | 1.99e-07 | 33 |
systemic arterial system | 1.99e-07 | 33 |
blood vessel smooth muscle | 4.02e-07 | 10 |
arterial system smooth muscle | 4.02e-07 | 10 |
artery smooth muscle tissue | 4.02e-07 | 10 |
aorta smooth muscle tissue | 4.02e-07 | 10 |
mesenchyme | 4.59e-07 | 160 |
entire embryonic mesenchyme | 4.59e-07 | 160 |