FFCP PHASE1:Hg19::chr8:101734170..101734194,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26986 | |EntrezGene=26986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |HGNC=8554 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERJ7 | |UniProt=E7ERJ7 | ||
|association_with_transcript=25bp_to_ENST00000522387,uc011lhc.1_5end | |association_with_transcript=25bp_to_ENST00000522387,uc011lhc.1_5end | ||
|cluster_id=chr8:101734170..101734194,- | |||
|description=CAGE_peak_8_at_PABPC1_5end | |description=CAGE_peak_8_at_PABPC1_5end | ||
|id=chr8:101734170..101734194,- | |id=chr8:101734170..101734194,- | ||
|ontology_enrichment_celltype=CL:0000860;1.66e-09;33!CL:0002057;1.66e-09;33!CL:0000473;1.40e-08;39!CL:0000234;1.40e-08;39 | |ontology_enrichment_celltype=CL:0000037!1.57e-12!172;CL:0000566!1.57e-12!172;CL:0002032!1.60e-12!165;CL:0000837!1.60e-12!165;CL:0000988!3.10e-12!182;CL:0000766!1.31e-11!76;CL:0002087!2.14e-11!119;CL:0000738!2.73e-11!140;CL:0000763!3.24e-11!112;CL:0000049!3.24e-11!112;CL:0002031!9.31e-11!124;CL:0000557!1.38e-10!71;CL:0002009!1.90e-10!65;CL:0000839!2.24e-10!70;CL:0002194!2.97e-10!63;CL:0000576!2.97e-10!63;CL:0000040!2.97e-10!63;CL:0000559!2.97e-10!63;CL:0002057!5.08e-09!42;CL:0000860!1.11e-08!45;CL:0000063!6.34e-07!578 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.66e-09;33!CL:0002057;1.66e-09;33!CL:0000473;1.40e-08;39!CL:0000234;1.40e-08;39 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002032,6.22e-13,161;CL:0000837,6.22e-13,161;CL:0000988,6.36e-13,177;CL:0000037,6.49e-13,168;CL:0000766,8.90e-13,72;CL:0000763,3.77e-12,108;CL:0000049,3.77e-12,108;CL:0002087,1.06e-11,115;CL:0000557,1.58e-11,67;CL:0000738,2.18e-11,136;CL:0002194,3.07e-11,59;CL:0000576,3.07e-11,59;CL:0000040,3.07e-11,59;CL:0000559,3.07e-11,59;CL:0002009,3.62e-11,61;CL:0000839,4.22e-11,66;CL:0000473,4.94e-11,48;CL:0000234,4.94e-11,48;CL:0002031,1.29e-10,120;CL:0000860,5.07e-10,42;CL:0002057,5.07e-10,42 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;1.58e-07;42 | ||
|ontology_enrichment_disease=DOID:14566!1.66e-08!239;DOID:162!3.20e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.00e-08!112;UBERON:0001474!6.18e-08!86;UBERON:0002371!1.39e-07!80;UBERON:0002390!1.94e-07!102;UBERON:0003061!1.94e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.99e-09,82;UBERON:0002193,4.12e-09,108;UBERON:0002405,7.03e-09,93;UBERON:0002371,9.49e-09,76;UBERON:0002390,1.04e-08,98;UBERON:0003061,1.04e-08,98;UBERON:0004765,6.48e-08,90;UBERON:0001434,1.13e-07,100 | |||
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| ||
|short_description=p8@PABPC1 | |short_description=p8@PABPC1 | ||
}} | }} |
Latest revision as of 20:15, 24 September 2015
Short description: | p8@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PABPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000522387, uc011lhc.1_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | E7ERJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 6.22e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.22e-13 | 161 |
hematopoietic cell | 6.36e-13 | 177 |
hematopoietic stem cell | 6.49e-13 | 168 |
myeloid leukocyte | 8.90e-13 | 72 |
myeloid cell | 3.77e-12 | 108 |
common myeloid progenitor | 3.77e-12 | 108 |
nongranular leukocyte | 1.06e-11 | 115 |
granulocyte monocyte progenitor cell | 1.58e-11 | 67 |
leukocyte | 2.18e-11 | 136 |
monopoietic cell | 3.07e-11 | 59 |
monocyte | 3.07e-11 | 59 |
monoblast | 3.07e-11 | 59 |
promonocyte | 3.07e-11 | 59 |
macrophage dendritic cell progenitor | 3.62e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.22e-11 | 66 |
defensive cell | 4.94e-11 | 48 |
phagocyte | 4.94e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.29e-10 | 120 |
classical monocyte | 5.07e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.07e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.99e-09 | 82 |
hemolymphoid system | 4.12e-09 | 108 |
immune system | 7.03e-09 | 93 |
bone marrow | 9.49e-09 | 76 |
hematopoietic system | 1.04e-08 | 98 |
blood island | 1.04e-08 | 98 |
skeletal element | 6.48e-08 | 90 |
skeletal system | 1.13e-07 | 100 |