FFCP PHASE1:Hg19::chr8:101728009..101728028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26986 | |EntrezGene=26986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |HGNC=8554 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-180bp_to_ENST00000519596_5end | |association_with_transcript=-180bp_to_ENST00000519596_5end | ||
|cluster_id=chr8:101728009..101728028,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_24_at_PABPC1_5end | |description=CAGE_peak_24_at_PABPC1_5end | ||
|id=chr8:101728009..101728028,- | |id=chr8:101728009..101728028,- | ||
|ontology_enrichment_celltype=CL:0000037!3.82e-15!172;CL:0000566!3.82e-15!172;CL:0000988!3.47e-14!182;CL:0002087!7.07e-13!119;CL:0002032!2.19e-12!165;CL:0000837!2.19e-12!165;CL:0000738!1.42e-11!140;CL:0000542!2.50e-09!53;CL:0000051!2.50e-09!53;CL:0002031!6.93e-09!124;CL:0000838!1.06e-08!52;CL:0000624!5.59e-08!6 | |ontology_enrichment_celltype=CL:0000037!3.82e-15!172;CL:0000566!3.82e-15!172;CL:0000988!3.47e-14!182;CL:0002087!7.07e-13!119;CL:0002032!2.19e-12!165;CL:0000837!2.19e-12!165;CL:0000738!1.42e-11!140;CL:0000542!2.50e-09!53;CL:0000051!2.50e-09!53;CL:0002031!6.93e-09!124;CL:0000838!1.06e-08!52;CL:0000624!5.59e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.26e-21;3!CL:0000624;2.58e-19;6!CL:0000791;1.25e-18;18!CL:0000789;1.25e-18;18!CL:0002419;1.25e-18;18!CL:0000084;3.74e-17;25!CL:0000542;1.35e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.54e-24,52;CL:0000542,2.08e-23,53;CL:0000051,2.08e-23,53;CL:0000623,6.66e-22,3;CL:0000825,6.66e-22,3;CL:0000624,1.62e-19,6;CL:0000791,9.50e-19,18;CL:0000789,9.50e-19,18;CL:0002420,9.50e-19,18;CL:0002419,9.50e-19,18;CL:0000790,9.50e-19,18;CL:0000084,3.16e-17,25;CL:0000827,3.16e-17,25;CL:0000738,1.02e-14,136;CL:0002087,4.30e-14,115;CL:0002031,1.06e-11,120;CL:0000037,3.16e-11,168;CL:0000988,1.80e-10,177;CL:0002032,3.84e-09,161;CL:0000837,3.84e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.25e-18;18!CL:0000051;1.35e-14;53 | |||
|ontology_enrichment_disease=DOID:162!4.51e-12!235;DOID:14566!4.54e-12!239;DOID:2531!3.72e-08!51;DOID:0060083!3.72e-08!51;DOID:0050686!1.89e-07!137;DOID:1240!2.35e-07!39;DOID:0050687!7.56e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p24@PABPC1 | |short_description=p24@PABPC1 | ||
}} | }} |
Latest revision as of 20:10, 24 September 2015
Short description: | p24@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PABPC1_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -180bp_to_ENST00000519596_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.54e-24 | 52 |
lymphocyte | 2.08e-23 | 53 |
common lymphoid progenitor | 2.08e-23 | 53 |
natural killer cell | 6.66e-22 | 3 |
pro-NK cell | 6.66e-22 | 3 |
CD4-positive, alpha-beta T cell | 1.62e-19 | 6 |
mature alpha-beta T cell | 9.50e-19 | 18 |
alpha-beta T cell | 9.50e-19 | 18 |
immature T cell | 9.50e-19 | 18 |
mature T cell | 9.50e-19 | 18 |
immature alpha-beta T cell | 9.50e-19 | 18 |
T cell | 3.16e-17 | 25 |
pro-T cell | 3.16e-17 | 25 |
leukocyte | 1.02e-14 | 136 |
nongranular leukocyte | 4.30e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.06e-11 | 120 |
hematopoietic stem cell | 3.16e-11 | 168 |
hematopoietic cell | 1.80e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.84e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.84e-09 | 161 |