FFCP PHASE1:Hg19::chr3:131756644..131756651,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:131756644..131756651,- to FFCP PHASE1:Hg19::chr3:131756644..131756651,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131034 | |EntrezGene=131034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2317 | |HGNC=2317 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFY4 | |UniProt=D6RFY4 | ||
|association_with_transcript=-81bp_to_ENST00000505957,uc011blq.1_5end | |||
|cluster_id=chr3:131756644..131756651,- | |||
|coexpression_cluster_id=C278 | |||
|description=CAGE_peak_13_at_CPNE4_5end | |||
|id=chr3:131756644..131756651,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.02e-82!22;UBERON:0001893!2.40e-79!34;UBERON:0001869!1.14e-74!32;UBERON:0000956!1.52e-72!25;UBERON:0000203!1.52e-72!25;UBERON:0002791!3.66e-72!33;UBERON:0001950!5.50e-66!20;UBERON:0002780!9.27e-66!41;UBERON:0001890!9.27e-66!41;UBERON:0006240!9.27e-66!41;UBERON:0003080!3.53e-64!42;UBERON:0002020!1.49e-61!34;UBERON:0003528!1.49e-61!34;UBERON:0001049!5.30e-47!57;UBERON:0005068!5.30e-47!57;UBERON:0006241!5.30e-47!57;UBERON:0007135!5.30e-47!57;UBERON:0002616!2.33e-45!59;UBERON:0003056!8.02e-44!61;UBERON:0000955!6.98e-43!69;UBERON:0006238!6.98e-43!69;UBERON:0000200!4.66e-41!6;UBERON:0001017!7.06e-36!82;UBERON:0005743!3.88e-34!86;UBERON:0002346!7.17e-33!90;UBERON:0000349!1.11e-32!5;UBERON:0001872!7.64e-32!5;UBERON:0001871!8.09e-31!7;UBERON:0000073!9.59e-31!94;UBERON:0001016!9.59e-31!94;UBERON:0003075!1.47e-30!86;UBERON:0007284!1.47e-30!86;UBERON:0002771!3.35e-30!3;UBERON:0007023!1.07e-28!115;UBERON:0000033!3.36e-26!123;UBERON:0000153!6.94e-25!129;UBERON:0007811!6.94e-25!129;UBERON:0001954!3.47e-21!2;UBERON:0003022!3.47e-21!2;UBERON:0002421!3.47e-21!2;UBERON:0002600!3.47e-21!2;UBERON:0000924!7.17e-18!173;UBERON:0006601!7.17e-18!173;UBERON:0004121!3.09e-16!169;UBERON:0000025!2.98e-12!194;UBERON:0002022!9.57e-12!1;UBERON:0001882!1.45e-11!1;UBERON:0005403!1.45e-11!1;UBERON:0007190!1.60e-11!1;UBERON:0003112!2.68e-11!1;UBERON:0000032!2.68e-11!1;UBERON:0005253!2.68e-11!1;UBERON:0003128!2.68e-11!1;UBERON:0002241!2.68e-11!1;UBERON:0001703!2.68e-11!1;UBERON:0004761!2.68e-11!1;UBERON:0009617!2.68e-11!1;UBERON:0002581!4.01e-11!1;UBERON:0002336!5.43e-11!1;UBERON:0001018!5.43e-11!1;UBERON:0002473!5.43e-11!1;UBERON:0005340!5.43e-11!1;UBERON:0002316!5.43e-11!1;UBERON:0003544!5.43e-11!1;UBERON:0001020!5.43e-11!1;UBERON:0005970!5.43e-11!1;UBERON:0002437!5.43e-11!1;UBERON:0004111!2.32e-09!241;UBERON:0000064!3.53e-09!219;UBERON:0000477!1.27e-08!286;UBERON:0000475!4.09e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;2.55e-98;1!UBERON:0001954;2.74e-50;2!UBERON:0003022;2.74e-50;2!UBERON:0002421;2.74e-50;2!UBERON:0002600;2.74e-50;2!UBERON:0000349;4.21e-21;5!UBERON:0002619;2.02e-18;22!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0002791;1.70e-11;32!UBERON:0001869;1.70e-11;32!UBERON:0003528;3.95e-11;34!UBERON:0002020;3.95e-11;34!UBERON:0002780;3.81e-10;41!UBERON:0001893;3.81e-10;34!UBERON:0001890;3.81e-10;41!UBERON:0000073;1.54e-08;53!UBERON:0002616;1.54e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,2.55e-98,1;UBERON:0001954,2.74e-50,2;UBERON:0003022,2.74e-50,2;UBERON:0002421,2.74e-50,2;UBERON:0002600,2.74e-50,2;UBERON:0000349,4.21e-21,5;UBERON:0002619,2.02e-18,22;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.136203406111576,0,0,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.136203406111576,0,0,0,0,0,1.64023802976667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@CPNE4 | |||
}} | }} |
Latest revision as of 20:08, 24 September 2015
Short description: | p13@CPNE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CPNE4_5end |
Coexpression cluster: | C278_amygdala_hippocampus_insula_medial_putamen_temporal_olfactory |
Association with transcript: | -81bp_to_ENST00000505957, uc011blq.1_5end |
EntrezGene: | CPNE4 |
HGNC: | 2317 |
UniProt: | D6RFY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 2.55e-98 | 1 |
Ammon's horn | 2.74e-50 | 2 |
lobe parts of cerebral cortex | 2.74e-50 | 2 |
hippocampal formation | 2.74e-50 | 2 |
limbic lobe | 2.74e-50 | 2 |
limbic system | 4.21e-21 | 5 |
regional part of cerebral cortex | 2.02e-18 | 22 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |