FFCP PHASE1:Hg19::chr4:115520059..115520073,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:115520059..115520073,+ to FFCP PHASE1:Hg19::chr4:115520059..115520073,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7368 | |EntrezGene=7368 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12555 | |HGNC=12555 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFW2 | |UniProt=D6RFW2 | ||
|association_with_transcript=133bp_to_ENST00000507710_5end | |||
|cluster_id=chr4:115520059..115520073,+ | |||
|description=CAGE_peak_8_at_UGT8_5end | |||
|id=chr4:115520059..115520073,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.87e-27;3!UBERON:0003057;6.87e-27;3!UBERON:0006222;5.53e-10;1 | |||
|ontology_enrichment_disease=DOID:305!1.79e-08!106;DOID:0050687!4.05e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.06e-23!57;UBERON:0005068!5.06e-23!57;UBERON:0006241!5.06e-23!57;UBERON:0007135!5.06e-23!57;UBERON:0007023!3.95e-20!115;UBERON:0000073!4.42e-20!94;UBERON:0001016!4.42e-20!94;UBERON:0005743!1.38e-19!86;UBERON:0001017!4.89e-19!82;UBERON:0003075!5.64e-19!86;UBERON:0007284!5.64e-19!86;UBERON:0002346!1.79e-17!90;UBERON:0002616!3.33e-17!59;UBERON:0002780!4.45e-16!41;UBERON:0001890!4.45e-16!41;UBERON:0006240!4.45e-16!41;UBERON:0001893!1.39e-15!34;UBERON:0002020!1.40e-15!34;UBERON:0003528!1.40e-15!34;UBERON:0003080!1.72e-15!42;UBERON:0002791!8.60e-15!33;UBERON:0000955!1.02e-14!69;UBERON:0006238!1.02e-14!69;UBERON:0001869!1.91e-13!32;UBERON:0003056!3.30e-13!61;UBERON:0004121!4.84e-12!169;UBERON:0000924!2.29e-11!173;UBERON:0006601!2.29e-11!173;UBERON:0000153!2.61e-11!129;UBERON:0007811!2.61e-11!129;UBERON:0000033!3.27e-11!123;UBERON:0002308!8.63e-11!9;UBERON:0000125!8.63e-11!9;UBERON:0003076!6.19e-09!15;UBERON:0003057!6.19e-09!15;UBERON:0009663!1.29e-08!7;UBERON:0002619!2.03e-08!22;UBERON:0000064!4.32e-08!219;UBERON:0000956!5.06e-08!25;UBERON:0000203!5.06e-08!25;UBERON:0002298!5.21e-08!8;UBERON:0002420!6.47e-08!9;UBERON:0007245!6.47e-08!9;UBERON:0010009!6.47e-08!9;UBERON:0010011!6.47e-08!9;UBERON:0000454!6.47e-08!9;UBERON:0001950!8.34e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;6.87e-27;3!UBERON:0005174;6.87e-27;3!UBERON:0001137;6.87e-27;3!UBERON:0002038;2.26e-10;1!UBERON:0009661;2.26e-10;1!UBERON:0002950;2.26e-10;1!UBERON:0001891;2.26e-10;1!UBERON:0002336;5.53e-10;1!UBERON:0011215;5.53e-10;1!UBERON:0001018;5.53e-10;1!UBERON:0002473;5.53e-10;1!UBERON:0005340;5.53e-10;1!UBERON:0003544;5.53e-10;1!UBERON:0005970;5.53e-10;1!UBERON:0002316;5.53e-10;1!UBERON:0001020;5.53e-10;1!UBERON:0002437;5.53e-10;1!UBERON:0000489;2.23e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.25e-27,3;UBERON:0005174,4.25e-27,3;UBERON:0001137,4.25e-27,3;UBERON:0001049,3.30e-11,56;UBERON:0005068,3.30e-11,56;UBERON:0006241,3.30e-11,56;UBERON:0007135,3.30e-11,56;UBERON:0002038,2.37e-10,1;UBERON:0009661,2.37e-10,1;UBERON:0002950,2.37e-10,1;UBERON:0001891,2.37e-10,1;UBERON:0009616,2.37e-10,1;UBERON:0010286,2.37e-10,1;UBERON:0002336,2.59e-10,1;UBERON:0011215,2.59e-10,1;UBERON:0001018,2.59e-10,1;UBERON:0002473,2.59e-10,1;UBERON:0005340,2.59e-10,1;UBERON:0003544,2.59e-10,1;UBERON:0005970,2.59e-10,1;UBERON:0002316,2.59e-10,1;UBERON:0001020,2.59e-10,1;UBERON:0002437,2.59e-10,1;UBERON:0003076,1.18e-09,15;UBERON:0003057,1.18e-09,15;UBERON:0001017,4.92e-09,81;UBERON:0001016,5.33e-08,89;UBERON:0003075,2.73e-07,82;UBERON:0007284,2.73e-07,82;UBERON:0000489,5.62e-07,31;UBERON:0002346,6.77e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0.774672005803016,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.464775771478074,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0.924184045252977,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,4.03092396566842,0,0,0,0.269605053441981,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0.796554137998498,0.254253650292766,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0.503464760927528,0.37950746544837,0,0,0.489698424477443,0.141353071433941,1.08194319871046,0,0.353830258013357,0.611030144933625,0,0,0.104421949505455,1.7524294574976,0,1.40558667435203,0.364909578431332,0.19566461893209,0,0,0,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0.397429223405979,0.50648636764703,0,0.561111741760736,0.85381197895741,0,0.288180834308212,0,0.171594997861965,1.1524383839052,0.124252535565433,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0.795229689809303,0.544813624446302,0.964518890790115,0.962776056180637,1.24632101408756,0,0,0.546746009922222,0,1.49730843868477,1.41627387964495,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0.197611631897944,2.19226677085613,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0.573409195690071,0.443716206147409,0.620964029413834,0.138348634936231,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0.276516872303462,0,0,0,0,0.737318726261158,0,0,0.320075189082423,0,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0,0,0,0.558644917973244,0,0.552032215008773,0,0,0,0.642292250964595,0,0.478901577171454,1.23069818544453,0,0.276629009856872,0.645902582527404,0,0.0981477185010256,0.589848616738702,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0,0.206686796501184,0.507326481551255,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0,0.806637912890455,0,1.56330385846713,0.657727735628491,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0.647782773655864,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,3.65753774946808,0,0,0,0,0.467878926924211,0,0,0.22589216407792,0,0.150962843566674,0.617393264863557,0.874238242015829,0.940634592723046,0,0.942706188406504,1.57046773691956,1.18818560130834,3.3812458206672,0,0.751871343838829,0,0,0,0,1.12337913364836,0.730336388246517,0,2.15009374727177,0,0.543931921527318,0,1.0580536810308,0,0,0,0.378499274505237,0.218531143927391,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,1.24119595034274,0.213233981900981,0.476128862927481,0,0,0.33639558774184,0.12729431655633,0.404234377916439,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0.407016343054873,0.426909383510862,0,0.269475606319761,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0.774672005803016,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.464775771478074,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0.924184045252977,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,4.03092396566842,0,0,0,0.269605053441981,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0.796554137998498,0.254253650292766,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0.503464760927528,0.37950746544837,0,0,0.489698424477443,0.141353071433941,1.08194319871046,0,0.353830258013357,0.611030144933625,0,0,0.104421949505455,1.7524294574976,0,1.40558667435203,0.364909578431332,0.19566461893209,0,0,0,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0.397429223405979,0.50648636764703,0,0.561111741760736,0.85381197895741,0,0.288180834308212,0,0.171594997861965,1.1524383839052,0.124252535565433,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0.795229689809303,0.544813624446302,0.964518890790115,0.962776056180637,1.24632101408756,0,0,0.546746009922222,0,1.49730843868477,1.41627387964495,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0.197611631897944,2.19226677085613,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0.573409195690071,0.443716206147409,0.620964029413834,0.138348634936231,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0.276516872303462,0,0,0,0,0.737318726261158,0,0,0.320075189082423,0,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0,0,0,0.558644917973244,0,0.552032215008773,0,0,0,0.642292250964595,0,0.478901577171454,1.23069818544453,0,0.276629009856872,0.645902582527404,0,0.0981477185010256,0.589848616738702,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0,0.206686796501184,0.507326481551255,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0,0.806637912890455,0,1.56330385846713,0.657727735628491,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0.647782773655864,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,3.65753774946808,0,0,0,0,0.467878926924211,0,0,0.22589216407792,0,0.150962843566674,0.617393264863557,0.874238242015829,0.940634592723046,0,0.942706188406504,1.57046773691956,1.18818560130834,3.3812458206672,0,0.751871343838829,0,0,0,0,1.12337913364836,0.730336388246517,0,2.15009374727177,0,0.543931921527318,0,1.0580536810308,0,0,0,0.378499274505237,0.218531143927391,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,1.24119595034274,0.213233981900981,0.476128862927481,0,0,0.33639558774184,0.12729431655633,0.404234377916439,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0.407016343054873,0.426909383510862,0,0.269475606319761,0,0,0,0,0.402547587182052,0 | ||
|short_description=p8@UGT8 | |||
}} | }} |
Latest revision as of 20:07, 24 September 2015
Short description: | p8@UGT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UGT8_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENST00000507710_5end |
EntrezGene: | UGT8 |
HGNC: | 12555 |
UniProt: | D6RFW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.25e-27 | 3 |
dorsal region element | 4.25e-27 | 3 |
dorsum | 4.25e-27 | 3 |
neural tube | 3.30e-11 | 56 |
neural rod | 3.30e-11 | 56 |
future spinal cord | 3.30e-11 | 56 |
neural keel | 3.30e-11 | 56 |
substantia nigra | 2.37e-10 | 1 |
midbrain nucleus | 2.37e-10 | 1 |
regional part of midbrain | 2.37e-10 | 1 |
midbrain | 2.37e-10 | 1 |
presumptive midbrain | 2.37e-10 | 1 |
midbrain neural tube | 2.37e-10 | 1 |
corpus callosum | 2.59e-10 | 1 |
central nervous system cell part cluster | 2.59e-10 | 1 |
axon tract | 2.59e-10 | 1 |
intercerebral commissure | 2.59e-10 | 1 |
dorsal telencephalic commissure | 2.59e-10 | 1 |
brain white matter | 2.59e-10 | 1 |
brain commissure | 2.59e-10 | 1 |
white matter | 2.59e-10 | 1 |
nervous system commissure | 2.59e-10 | 1 |
cerebral hemisphere white matter | 2.59e-10 | 1 |
posterior neural tube | 1.18e-09 | 15 |
chordal neural plate | 1.18e-09 | 15 |
central nervous system | 4.92e-09 | 81 |
nervous system | 5.33e-08 | 89 |
neural plate | 2.73e-07 | 82 |
presumptive neural plate | 2.73e-07 | 82 |
cavitated compound organ | 5.62e-07 | 31 |
neurectoderm | 6.77e-07 | 86 |