FFCP PHASE1:Hg19::chr4:114901128..114901136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79642 | |EntrezGene=79642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |HGNC=26286 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-245bp_to_ENST00000503013_5end | |association_with_transcript=-245bp_to_ENST00000503013_5end | ||
|cluster_id=chr4:114901128..114901136,- | |||
|description=CAGE_peak_20_at_ARSJ_5end | |description=CAGE_peak_20_at_ARSJ_5end | ||
|id=chr4:114901128..114901136,- | |id=chr4:114901128..114901136,- | ||
|ontology_enrichment_celltype=CL:0002620!1.91e-08!23 | |ontology_enrichment_celltype=CL:0002620!1.91e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002569;2.19e-12;6!CL:0000128;9.43e-11;7!CL:0000126;9.43e-11;7!CL:0000127;9.43e-11;7!CL:0000081;2.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,2.19e-12,6;CL:0000128,8.99e-11,7;CL:0000126,8.99e-11,7;CL:0000127,8.99e-11,7;CL:0002453,8.99e-11,7;CL:0000081,2.32e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;5.96e-34;2!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.05e-34,2;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.19e-12;6!UBERON:0003104;8.16e-11;7!UBERON:0009142;8.16e-11;7!UBERON:0002331;5.73e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,2.19e-12,6;UBERON:0002331,5.73e-08,10;UBERON:0000358,5.73e-08,10;UBERON:0000307,5.73e-08,10;UBERON:0000091,5.73e-08,10;UBERON:0000087,5.73e-08,10;UBERON:0007010,5.73e-08,10;UBERON:0007806,5.73e-08,10;UBERON:0008780,5.73e-08,10;UBERON:0005728,5.73e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0.647491777472526,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.600952235626387,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0,0,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0.145016693914229,0,0,0,0,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,1.84083628503879,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.227586896570999,0.508507300585533,0,0,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.236387681767936,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0.173858272302579,1.60342272946051,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0.471353094203252,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0.129177819672012,0,0.224263725161227,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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| ||
|short_description=p20@ARSJ | |short_description=p20@ARSJ | ||
}} | }} |
Latest revision as of 19:53, 24 September 2015
Short description: | p20@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ARSJ_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENST00000503013_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 2.19e-12 | 6 |
oligodendrocyte | 8.99e-11 | 7 |
macroglial cell | 8.99e-11 | 7 |
astrocyte | 8.99e-11 | 7 |
oligodendrocyte precursor cell | 8.99e-11 | 7 |
blood cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 2.19e-12 | 6 |
umbilical cord | 5.73e-08 | 10 |
blastocyst | 5.73e-08 | 10 |
blastula | 5.73e-08 | 10 |
bilaminar disc | 5.73e-08 | 10 |
inner cell mass | 5.73e-08 | 10 |
cleaving embryo | 5.73e-08 | 10 |
connecting stalk | 5.73e-08 | 10 |
inner cell mass derived epiblast | 5.73e-08 | 10 |
extraembryonic mesoderm | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.05e-34 | 2 |
nervous system cancer | 7.92e-07 | 11 |