FFCP PHASE1:Hg19::chr8:10158613..10158628,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4482 | |EntrezGene=4482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7377 | |HGNC=7377 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-416bp_to_ENST00000521686_5end | |association_with_transcript=-416bp_to_ENST00000521686_5end | ||
|cluster_id=chr8:10158613..10158628,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_11_at_MSRA_5end | |description=CAGE_peak_11_at_MSRA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.94e-63!57;UBERON:0005068!1.94e-63!57;UBERON:0006241!1.94e-63!57;UBERON:0007135!1.94e-63!57;UBERON:0002619!2.28e-58!22;UBERON:0002616!1.57e-56!59;UBERON:0001950!1.92e-56!20;UBERON:0001869!4.69e-56!32;UBERON:0001893!1.30e-52!34;UBERON:0002020!1.75e-52!34;UBERON:0003528!1.75e-52!34;UBERON:0000956!3.13e-51!25;UBERON:0000203!3.13e-51!25;UBERON:0000955!7.62e-51!69;UBERON:0006238!7.62e-51!69;UBERON:0001017!5.31e-49!82;UBERON:0002791!1.27e-48!33;UBERON:0005743!1.65e-46!86;UBERON:0003075!1.14e-43!86;UBERON:0007284!1.14e-43!86;UBERON:0002780!3.80e-43!41;UBERON:0001890!3.80e-43!41;UBERON:0006240!3.80e-43!41;UBERON:0003080!4.79e-42!42;UBERON:0000073!1.20e-41!94;UBERON:0001016!1.20e-41!94;UBERON:0002346!1.70e-41!90;UBERON:0007023!2.67e-34!115;UBERON:0000200!4.41e-33!6;UBERON:0000033!9.15e-29!123;UBERON:0003056!7.13e-28!61;UBERON:0000153!3.51e-27!129;UBERON:0007811!3.51e-27!129;UBERON:0001871!1.94e-24!7;UBERON:0003076!3.63e-22!15;UBERON:0003057!3.63e-22!15;UBERON:0004733!1.24e-21!12;UBERON:0002028!1.24e-21!12;UBERON:0007277!1.24e-21!12;UBERON:0004121!6.74e-21!169;UBERON:0000924!2.75e-20!173;UBERON:0006601!2.75e-20!173;UBERON:0004732!6.65e-20!13;UBERON:0000025!8.60e-18!194;UBERON:0002771!1.08e-17!3;UBERON:0002680!2.37e-15!9;UBERON:0001895!2.37e-15!9;UBERON:0010092!2.37e-15!9;UBERON:0004111!2.39e-14!241;UBERON:0000064!1.49e-12!219;UBERON:0001870!2.53e-12!2;UBERON:0000477!3.23e-12!286;UBERON:0002021!8.15e-11!5;UBERON:0000483!8.49e-11!309;UBERON:0002298!1.08e-10!8;UBERON:0000119!1.24e-10!312;UBERON:0001872!1.29e-10!5;UBERON:0000349!3.63e-10!5;UBERON:0002037!2.19e-09!6;UBERON:0006215!2.19e-09!6;UBERON:0000475!3.77e-08!365;UBERON:0001896!4.55e-08!3;UBERON:0005290!4.55e-08!3;UBERON:0010096!4.55e-08!3;UBERON:0000988!8.33e-08!3;UBERON:0002702!4.43e-07!1;UBERON:0003112!5.26e-07!1;UBERON:0000032!5.26e-07!1;UBERON:0005253!5.26e-07!1;UBERON:0003128!5.26e-07!1;UBERON:0002241!5.26e-07!1;UBERON:0001703!5.26e-07!1;UBERON:0004761!5.26e-07!1;UBERON:0009617!5.26e-07!1;UBERON:0002902!6.24e-07!1;UBERON:0009899!6.24e-07!1;UBERON:0002022!6.99e-07!1;UBERON:0002581!8.27e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.94e-63!57;UBERON:0005068!1.94e-63!57;UBERON:0006241!1.94e-63!57;UBERON:0007135!1.94e-63!57;UBERON:0002619!2.28e-58!22;UBERON:0002616!1.57e-56!59;UBERON:0001950!1.92e-56!20;UBERON:0001869!4.69e-56!32;UBERON:0001893!1.30e-52!34;UBERON:0002020!1.75e-52!34;UBERON:0003528!1.75e-52!34;UBERON:0000956!3.13e-51!25;UBERON:0000203!3.13e-51!25;UBERON:0000955!7.62e-51!69;UBERON:0006238!7.62e-51!69;UBERON:0001017!5.31e-49!82;UBERON:0002791!1.27e-48!33;UBERON:0005743!1.65e-46!86;UBERON:0003075!1.14e-43!86;UBERON:0007284!1.14e-43!86;UBERON:0002780!3.80e-43!41;UBERON:0001890!3.80e-43!41;UBERON:0006240!3.80e-43!41;UBERON:0003080!4.79e-42!42;UBERON:0000073!1.20e-41!94;UBERON:0001016!1.20e-41!94;UBERON:0002346!1.70e-41!90;UBERON:0007023!2.67e-34!115;UBERON:0000200!4.41e-33!6;UBERON:0000033!9.15e-29!123;UBERON:0003056!7.13e-28!61;UBERON:0000153!3.51e-27!129;UBERON:0007811!3.51e-27!129;UBERON:0001871!1.94e-24!7;UBERON:0003076!3.63e-22!15;UBERON:0003057!3.63e-22!15;UBERON:0004733!1.24e-21!12;UBERON:0002028!1.24e-21!12;UBERON:0007277!1.24e-21!12;UBERON:0004121!6.74e-21!169;UBERON:0000924!2.75e-20!173;UBERON:0006601!2.75e-20!173;UBERON:0004732!6.65e-20!13;UBERON:0000025!8.60e-18!194;UBERON:0002771!1.08e-17!3;UBERON:0002680!2.37e-15!9;UBERON:0001895!2.37e-15!9;UBERON:0010092!2.37e-15!9;UBERON:0004111!2.39e-14!241;UBERON:0000064!1.49e-12!219;UBERON:0001870!2.53e-12!2;UBERON:0000477!3.23e-12!286;UBERON:0002021!8.15e-11!5;UBERON:0000483!8.49e-11!309;UBERON:0002298!1.08e-10!8;UBERON:0000119!1.24e-10!312;UBERON:0001872!1.29e-10!5;UBERON:0000349!3.63e-10!5;UBERON:0002037!2.19e-09!6;UBERON:0006215!2.19e-09!6;UBERON:0000475!3.77e-08!365;UBERON:0001896!4.55e-08!3;UBERON:0005290!4.55e-08!3;UBERON:0010096!4.55e-08!3;UBERON:0000988!8.33e-08!3;UBERON:0002702!4.43e-07!1;UBERON:0003112!5.26e-07!1;UBERON:0000032!5.26e-07!1;UBERON:0005253!5.26e-07!1;UBERON:0003128!5.26e-07!1;UBERON:0002241!5.26e-07!1;UBERON:0001703!5.26e-07!1;UBERON:0004761!5.26e-07!1;UBERON:0009617!5.26e-07!1;UBERON:0002902!6.24e-07!1;UBERON:0009899!6.24e-07!1;UBERON:0002022!6.99e-07!1;UBERON:0002581!8.27e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0004733;1.41e-25;12!UBERON:0002028;1.41e-25;12!UBERON:0004732;1.10e-23;13!UBERON:0002702;1.07e-17;2!UBERON:0001950;8.28e-15;20!UBERON:0002619;1.36e-13;22!UBERON:0001870;2.89e-12;3!UBERON:0000956;4.09e-12;25!UBERON:0000203;4.09e-12;25!UBERON:0000073;4.51e-12;53!UBERON:0002616;4.51e-12;53!UBERON:0002791;4.48e-10;32!UBERON:0001869;4.48e-10;32!UBERON:0000955;8.10e-10;68!UBERON:0001893;1.51e-09;34!UBERON:0001016;3.87e-08;83!UBERON:0001017;5.00e-08;75!UBERON:0001872;7.01e-08;5!UBERON:0002021;7.01e-08;5!UBERON:0003528;1.19e-07;34!UBERON:0002020;1.19e-07;34!UBERON:0002780;1.60e-07;41!UBERON:0001890;1.60e-07;41!UBERON:0000200;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002037;3.84e-50;6!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0004733;1.41e-25;12!UBERON:0002028;1.41e-25;12!UBERON:0004732;1.10e-23;13!UBERON:0002702;1.07e-17;2!UBERON:0001950;8.28e-15;20!UBERON:0002619;1.36e-13;22!UBERON:0001870;2.89e-12;3!UBERON:0000956;4.09e-12;25!UBERON:0000203;4.09e-12;25!UBERON:0000073;4.51e-12;53!UBERON:0002616;4.51e-12;53!UBERON:0002791;4.48e-10;32!UBERON:0001869;4.48e-10;32!UBERON:0000955;8.10e-10;68!UBERON:0001893;1.51e-09;34!UBERON:0001016;3.87e-08;83!UBERON:0001017;5.00e-08;75!UBERON:0001872;7.01e-08;5!UBERON:0002021;7.01e-08;5!UBERON:0003528;1.19e-07;34!UBERON:0002020;1.19e-07;34!UBERON:0002780;1.60e-07;41!UBERON:0001890;1.60e-07;41!UBERON:0000200;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0004733,1.41e-25,12;UBERON:0002028,1.41e-25,12;UBERON:0007277,1.41e-25,12;UBERON:0004732,1.11e-23,13;UBERON:0000073,2.29e-22,53;UBERON:0002616,2.29e-22,53;UBERON:0001049,3.21e-21,56;UBERON:0005068,3.21e-21,56;UBERON:0006241,3.21e-21,56;UBERON:0007135,3.21e-21,56;UBERON:0003076,1.20e-20,15;UBERON:0003057,1.20e-20,15;UBERON:0002702,9.07e-18,2;UBERON:0000955,2.22e-17,68;UBERON:0006238,2.22e-17,68;UBERON:0001950,8.28e-15,20;UBERON:0001017,9.81e-15,81;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0002346,4.44e-14,86;UBERON:0002619,1.36e-13,22;UBERON:0001016,2.44e-13,89;UBERON:0001870,2.59e-12,3;UBERON:0000956,4.09e-12,25;UBERON:0000203,4.09e-12,25;UBERON:0010371,9.68e-12,104;UBERON:0002791,1.05e-09,32;UBERON:0001869,1.05e-09,32;UBERON:0010314,2.38e-09,132;UBERON:0003528,3.43e-09,34;UBERON:0002020,3.43e-09,34;UBERON:0001893,3.43e-09,34;UBERON:0002021,7.01e-08,5;UBERON:0001872,7.49e-08,5;UBERON:0002780,8.93e-08,41;UBERON:0001890,8.93e-08,41;UBERON:0003080,8.93e-08,41;UBERON:0006240,8.93e-08,41;UBERON:0007023,1.11e-07,114;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0000200,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,9.15490417902499,9.39923709415409,5.02430952221031,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.502291168478,0,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.798169295285756,0,0,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.03343398250592,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.460409414939944,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,9.15490417902499,9.39923709415409,5.02430952221031,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.502291168478,0,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.798169295285756,0,0,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.03343398250592,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.460409414939944,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@MSRA | |short_description=p11@MSRA | ||
}} | }} |
Latest revision as of 19:52, 24 September 2015
Short description: | p11@MSRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MSRA_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -416bp_to_ENST00000521686_5end |
EntrezGene: | MSRA |
HGNC: | 7377 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data