FFCP PHASE1:Hg19::chr7:103086648..103086659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375611 | |EntrezGene=375611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9359 | |HGNC=9359 | ||
|TSSclassifier=strong | |||
|UniProt=P58743,Q496J2 | |UniProt=P58743,Q496J2 | ||
|association_with_transcript=-24bp_to_ENST00000306312,ENST00000432958,ENST00000487407,NM_001167962,NM_198999,NM_206883,NM_206884,NM_206885_5end | |association_with_transcript=-24bp_to_ENST00000306312,ENST00000432958,ENST00000487407,NM_001167962,NM_198999,NM_206883,NM_206884,NM_206885_5end | ||
|cluster_id=chr7:103086648..103086659,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_2_at_SLC26A5_5end | |description=CAGE_peak_2_at_SLC26A5_5end | ||
|id=chr7:103086648..103086659,- | |id=chr7:103086648..103086659,- | ||
|ontology_enrichment_celltype=CL:0000064!7.29e-10!3;CL:0005012!7.29e-10!3;CL:0000067!7.29e-10!3;CL:0002304!7.29e-10!3 | |ontology_enrichment_celltype=CL:0000064!7.29e-10!3;CL:0005012!7.29e-10!3;CL:0000067!7.29e-10!3;CL:0002304!7.29e-10!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-88;3!UBERON:0005425;4.66e-66;1!UBERON:0003056;4.09e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@SLC26A5 | |short_description=p2@SLC26A5 | ||
}} | }} |
Latest revision as of 19:50, 24 September 2015
Short description: | p2@SLC26A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC26A5_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -24bp_to_ENST00000306312, ENST00000432958, ENST00000487407, NM_001167962, NM_198999, NM_206883, NM_206884, NM_206885_5end |
EntrezGene: | SLC26A5 |
HGNC: | 9359 |
UniProt: | P58743Q496J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
layer of retina | 1.03e-17 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
peripheral nervous system | 1.21e-08 | 8 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |