FFCP PHASE1:Hg19::chr4:114900757..114900779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79642 | |EntrezGene=79642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |HGNC=26286 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGC1 | |UniProt=D6RGC1 | ||
|association_with_transcript=23bp_to_ENST00000509829,uc010imv.1_5end | |association_with_transcript=23bp_to_ENST00000509829,uc010imv.1_5end | ||
|cluster_id=chr4:114900757..114900779,- | |||
|description=CAGE_peak_2_at_ARSJ_5end | |description=CAGE_peak_2_at_ARSJ_5end | ||
|id=chr4:114900757..114900779,- | |id=chr4:114900757..114900779,- | ||
|ontology_enrichment_celltype=CL:0000359;1.47e-15;32!CL:0000192;5.24e-13;43!CL:0000187;3.27e-09;55!CL:0002620;4.03e-08;23!CL:0000057;6.79e-07;73!CL:0000393;8.45e-07;61!CL:0000211;8.45e-07;61 | |ontology_enrichment_celltype=CL:0000055!2.21e-27!180;CL:0000680!6.05e-17!57;CL:0000056!6.05e-17!57;CL:0000355!6.05e-17!57;CL:0000192!1.13e-15!42;CL:0000514!1.13e-15!42;CL:0000187!1.42e-15!54;CL:0000220!1.86e-15!246;CL:0000222!3.69e-15!119;CL:0002321!4.25e-15!248;CL:0000359!9.86e-15!32;CL:0000057!1.08e-14!75;CL:0000183!1.91e-14!59;CL:0000393!3.00e-12!60;CL:0000211!3.00e-12!60;CL:0002620!5.45e-08!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;1.47e-15;32!CL:0000192;5.24e-13;43!CL:0000187;3.27e-09;55!CL:0002620;4.03e-08;23!CL:0000057;6.79e-07;73!CL:0000393;8.45e-07;61!CL:0000211;8.45e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.79e-19,58;CL:0000056,9.79e-19,58;CL:0000355,9.79e-19,58;CL:0000192,1.51e-17,43;CL:0000514,1.51e-17,43;CL:0000187,3.46e-17,55;CL:0000359,1.56e-16,32;CL:0000057,2.39e-15,76;CL:0000222,5.06e-15,121;CL:0000393,1.95e-13,61;CL:0000211,1.95e-13,61;CL:0002321,2.85e-13,250;CL:0002620,2.24e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.24e-13;43!CL:0000355;2.48e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;7.08e-14;33!UBERON:0004571;7.08e-14;33!UBERON:0001637;9.06e-13;42!UBERON:0003509;9.06e-13;42!UBERON:0004572;9.06e-13;42!UBERON:0007500;1.19e-08;56!UBERON:0001981;1.19e-08;56!UBERON:0004537;1.19e-08;56!UBERON:0000947;1.99e-08;21!UBERON:0010191;1.99e-08;21!UBERON:0002049;4.11e-08;75!UBERON:0007798;4.11e-08;75!UBERON:0000055;2.32e-07;65!UBERON:0002385;3.55e-07;31!UBERON:0001015;3.55e-07;31!UBERON:0000383;3.55e-07;31!UBERON:0003914;6.51e-07;74 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.74e-22!365;UBERON:0000914!1.89e-20!83;UBERON:0002329!1.89e-20!83;UBERON:0003077!1.89e-20!83;UBERON:0003059!1.89e-20!83;UBERON:0007282!1.89e-20!83;UBERON:0009618!1.89e-20!83;UBERON:0007285!1.89e-20!83;UBERON:0000481!6.40e-20!347;UBERON:0002049!3.10e-18!79;UBERON:0007798!3.10e-18!79;UBERON:0005256!7.27e-18!143;UBERON:0000490!1.62e-16!138;UBERON:0004290!1.83e-16!70;UBERON:0002385!2.19e-16!63;UBERON:0001015!2.19e-16!63;UBERON:0000383!2.19e-16!63;UBERON:0001134!2.35e-16!61;UBERON:0002036!2.35e-16!61;UBERON:0003082!2.35e-16!61;UBERON:0001637!5.79e-16!42;UBERON:0003509!5.79e-16!42;UBERON:0004572!5.79e-16!42;UBERON:0001981!6.16e-16!60;UBERON:0007500!6.16e-16!60;UBERON:0004537!6.16e-16!60;UBERON:0006965!6.16e-16!60;UBERON:0000486!7.42e-16!82;UBERON:0000468!8.84e-16!659;UBERON:0000055!2.02e-15!69;UBERON:0000119!2.08e-15!312;UBERON:0000483!2.44e-15!309;UBERON:0003104!3.76e-15!238;UBERON:0009142!3.76e-15!238;UBERON:0004872!1.63e-14!84;UBERON:0004573!4.04e-14!33;UBERON:0004571!4.04e-14!33;UBERON:0000467!6.08e-14!625;UBERON:0002100!6.68e-14!216;UBERON:0000480!1.10e-13!626;UBERON:0000477!2.55e-13!286;UBERON:0003102!2.90e-13!95;UBERON:0003914!5.63e-13!118;UBERON:0004535!1.96e-11!110;UBERON:0004111!2.80e-11!241;UBERON:0001009!4.29e-11!113;UBERON:0002050!1.33e-09!605;UBERON:0005423!1.33e-09!605;UBERON:0000923!2.68e-09!604;UBERON:0005291!2.68e-09!604;UBERON:0006598!2.68e-09!604;UBERON:0002532!2.68e-09!604;UBERON:0000922!3.23e-09!612;UBERON:0000947!4.11e-08!21;UBERON:0010191!4.11e-08!21;UBERON:0000025!3.48e-07!194;UBERON:0001444!8.46e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.08e-14;33!UBERON:0004571;7.08e-14;33!UBERON:0001637;9.06e-13;42!UBERON:0003509;9.06e-13;42!UBERON:0004572;9.06e-13;42!UBERON:0007500;1.19e-08;56!UBERON:0001981;1.19e-08;56!UBERON:0004537;1.19e-08;56!UBERON:0000947;1.99e-08;21!UBERON:0010191;1.99e-08;21!UBERON:0002049;4.11e-08;75!UBERON:0007798;4.11e-08;75!UBERON:0000055;2.32e-07;65!UBERON:0002385;3.55e-07;31!UBERON:0001015;3.55e-07;31!UBERON:0000383;3.55e-07;31!UBERON:0003914;6.51e-07;74 | |||
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|phase1_expression=0.726713517082227,2.14100523890983,0.704772020479856,0,0,0,7.59899634504932,1.89515962028049,0.261185628199839,1.47440361900905,0,1.09220686065086,1.05506791291381,3.7129905888014,3.97676850873499,2.01697543935533,4.82155622419182,2.92124036154949,3.90346239032406,1.35433163884467,1.83600622119828,2.5076377718247,2.0036519099174,4.79060487755095,2.63639543149086,0.152826811495903,0,0,0,0,0.154816123316076,0.919421224478927,1.50602959389125,2.9580320813343,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0.201606743224732,0,0.144824403882799,0,2.01210257911091,3.83587685530591,2.1686349143074,8.02140657017423,2.462390822334,3.9764297352555,6.8128881842369,3.40325341790644,1.99556457716308,2.28370442802128,0.982343066232845,1.45718115317017,1.11235332835329,0,0,0,0,0,0,2.38514888840046,1.72046919021225,1.73570250803797,2.82653970962005,2.09749718104953,2.20094433552054,1.46296476575767,0.258416759169329,2.13459757612026,1.67360306382335,0.805658634218294,2.28081631715554,0.732186172644509,0.367663080345869,4.0507097394088,1.69669483739752,2.2452937262617,2.59006405111641,3.06633274931766,0,2.19842092716489,0,0,1.74437620857014,2.98183171017191,4.93858995491861,5.56118559415519,5.73673241497627,2.12801029319014,3.92474320099615,3.20246987189115,2.22000793575444,3.11211035399766,2.82892411346345,1.79808093424805,1.05950199351452,2.30470369792,2.57753575017176,1.24864030732128,1.71141546463335,3.88566569434683,2.46612447151906,2.42809416552197,2.66856532734272,4.08308342509786,3.4393608847295,2.47981874821837,3.56400857184616,3.70900393917835,0.910161361938026,2.87447256726495,2.69337782326506,3.75355559615892,4.98715407871529,3.5118209670467,4.59731693698529,5.85928429735728,3.85669422744072,3.58779271377724,4.69826255400848,4.87443372666992,4.20127534518163,3.91599611106068,2.06112432036503,3.35010341396862,5.06328996723799,1.85130309806277,3.5340728394176,4.23429533754577,3.07127507955743,3.55009592516614,3.82857973265033,3.22165125389926,2.51239109112286,3.81844568827169,0.573609190778008,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0,0,5.14592750554308,0,2.3218396401599,1.44375896333917,0.709840800239063,1.51726221070292,0.723033089650446,0.772057809126758,0.871517776369625,0.949082476444386,0.404493924480493,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0.737930631258681,1.88724591328378,3.29250856225877,2.24803506515239,0.904760751704678,3.88871469665824,3.58389135841357,3.11980435583874,5.77325368101093,3.82570336417754,3.40485213283883,1.73239737313289,2.31492756288305,2.09279567458058,0,0,0,0,0,1.87467667973554,1.51183915378974,2.97727704209012,3.04498977189684,3.19697332365358,1.15014803749563,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.616964956219941,0,0,0.560655421726804,1.30788020649984,1.6134422880609,1.68053230485111,0,0,2.92531928243358,4.16029747645464,1.02882949704857,4.25547396069835,1.3321108950805,7.00592168924923,1.08524321078289,1.64648067356154,2.60588947434988,4.26470338491055,3.95975936466715,2.1100756394171,1.74306691720059,1.69954085009497,0,0,0,5.99062138728957,5.7430967917057,1.42636905040718,7.96297186671686,3.6985738059069,3.40215830155802,0,0.394061520403854,0,0.128343036279748,2.28685161800217,1.30139853857622,0,0.335032530668698,0,0,0,0,6.25726607767613,3.00102312635806,4.6115054028955,4.15941723061614,5.53129865271201,3.6271555457805,5.03708084468667,1.50473049863859,0,1.03473071292505,5.31380478828349,2.76553752812555,4.60483156680839,0.587403472388222,1.37257369524342,0.206768026122887,0,0.106727557803444,1.21251028578504,0,1.20956117331872,0.496215615637554,1.53461973288062,0.841980283299221,1.02511319404561,3.07024349440022,1.12597744800525,1.48418066444991,2.00472601943452,0.532685175939381,2.87445046048332,4.15403543346897,1.74315567689939,0.483437798366489,2.20557117333613,3.03867263488458,3.55924789310281,4.00600569614778,3.54035920390445,1.80479845162965,3.46569016969866,3.13739907670742,1.46139224653261,6.43864936246542,0,1.02056223165909,4.10240240594065,0,0.812839312631559,0.501689773854853,2.54876273045038,0.831076008928724,1.34324852833307,0,0,0.769350375349168,0.984043937099117,0.650756789328606,1.03041011647722,1.09883357782012,0.990113999047056,2.29706215198469,0.650060246036521,6.42735719376638,0.96670718292122,2.00263202249038,1.38153307253517,1.92971201478343,3.86712881525785,2.90033387828457,1.53407929348982,1.24644849905432,4.13212288402445,2.49847087574638,3.82838137483752,4.95673126192195,2.32422774648643,7.24068397710472,9.7585217822484,5.23657086299351,2.66153015158511,5.21959795245044,5.74505079222152,6.15437012990562,2.232950216158,3.48017367190598,3.43134349062885,1.535386747868,5.13526785640705,3.81843897511124,3.13979456079692,3.05783177891635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| ||
|short_description=p2@ARSJ | |short_description=p2@ARSJ | ||
}} | }} |
Latest revision as of 19:46, 24 September 2015
Short description: | p2@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARSJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000509829, uc010imv.1_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | D6RGC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.79e-19 | 58 |
myoblast | 9.79e-19 | 58 |
multi-potent skeletal muscle stem cell | 9.79e-19 | 58 |
smooth muscle cell | 1.51e-17 | 43 |
smooth muscle myoblast | 1.51e-17 | 43 |
muscle cell | 3.46e-17 | 55 |
vascular associated smooth muscle cell | 1.56e-16 | 32 |
fibroblast | 2.39e-15 | 76 |
mesodermal cell | 5.06e-15 | 121 |
electrically responsive cell | 1.95e-13 | 61 |
electrically active cell | 1.95e-13 | 61 |
embryonic cell | 2.85e-13 | 250 |
skin fibroblast | 2.24e-08 | 23 |