FFCP PHASE1:Hg19::chr18:77155922..77155939,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7775 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000397790_5end | |||
|cluster_id=chr18:77155922..77155939,+ | |||
|description=CAGE_peak_1_at_NFATC1_5end | |||
|id=chr18:77155922..77155939,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.89e-18!42;CL:0000037!1.70e-17!172;CL:0000566!1.70e-17!172;CL:0000763!3.52e-16!112;CL:0000049!3.52e-16!112;CL:0000988!8.65e-16!182;CL:0002032!1.91e-15!165;CL:0000837!1.91e-15!165;CL:0000860!2.80e-15!45;CL:0000557!2.99e-15!71;CL:0000738!2.00e-14!140;CL:0000766!6.40e-14!76;CL:0002031!1.74e-12!124;CL:0000839!1.79e-12!70;CL:0002009!2.39e-12!65;CL:0002194!2.20e-11!63;CL:0000576!2.20e-11!63;CL:0000040!2.20e-11!63;CL:0000559!2.20e-11!63;CL:0002087!4.76e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.30e-14;33!CL:0002057;8.30e-14;33!CL:0000473;2.06e-11;39!CL:0000234;2.06e-11;39!CL:0000576;1.70e-09;48!CL:0000766;1.63e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.60e-20,168;CL:0000860,5.47e-19,42;CL:0002057,5.47e-19,42;CL:0000473,8.13e-19,48;CL:0000234,8.13e-19,48;CL:0000988,9.13e-19,177;CL:0002032,8.33e-18,161;CL:0000837,8.33e-18,161;CL:0000763,1.10e-17,108;CL:0000049,1.10e-17,108;CL:0000557,2.90e-17,67;CL:0000738,7.30e-17,136;CL:0000766,1.21e-15,72;CL:0002031,6.65e-15,120;CL:0000839,2.51e-14,66;CL:0002009,4.62e-14,61;CL:0002087,2.80e-13,115;CL:0002194,5.42e-13,59;CL:0000576,5.42e-13,59;CL:0000040,5.42e-13,59;CL:0000559,5.42e-13,59;CL:0000134,5.38e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.32e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-14!102;UBERON:0003061!4.89e-14!102;UBERON:0002193!1.26e-13!112;UBERON:0001474!2.39e-12!86;UBERON:0002371!3.00e-12!80;UBERON:0003081!3.96e-10!216;UBERON:0002405!1.31e-08!115;UBERON:0004765!3.01e-08!101;UBERON:0001434!3.01e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.23e-16,98;UBERON:0003061,3.23e-16,98;UBERON:0002193,1.25e-15,108;UBERON:0002405,2.71e-14,93;UBERON:0001474,3.87e-14,82;UBERON:0002371,4.97e-14,76;UBERON:0003081,1.23e-13,203;UBERON:0004765,2.69e-10,90;UBERON:0001434,2.71e-08,100 | |||
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| |||
|short_description=p1@NFATC1 | |||
}} |
Latest revision as of 19:31, 24 September 2015
Short description: | p1@NFATC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFATC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000397790_5end |
EntrezGene: | NFATC1 |
HGNC: | 7775 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.60e-20 | 168 |
classical monocyte | 5.47e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.47e-19 | 42 |
defensive cell | 8.13e-19 | 48 |
phagocyte | 8.13e-19 | 48 |
hematopoietic cell | 9.13e-19 | 177 |
hematopoietic oligopotent progenitor cell | 8.33e-18 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-18 | 161 |
myeloid cell | 1.10e-17 | 108 |
common myeloid progenitor | 1.10e-17 | 108 |
granulocyte monocyte progenitor cell | 2.90e-17 | 67 |
leukocyte | 7.30e-17 | 136 |
myeloid leukocyte | 1.21e-15 | 72 |
hematopoietic lineage restricted progenitor cell | 6.65e-15 | 120 |
myeloid lineage restricted progenitor cell | 2.51e-14 | 66 |
macrophage dendritic cell progenitor | 4.62e-14 | 61 |
nongranular leukocyte | 2.80e-13 | 115 |
monopoietic cell | 5.42e-13 | 59 |
monocyte | 5.42e-13 | 59 |
monoblast | 5.42e-13 | 59 |
promonocyte | 5.42e-13 | 59 |
mesenchymal cell | 5.38e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.23e-16 | 98 |
blood island | 3.23e-16 | 98 |
hemolymphoid system | 1.25e-15 | 108 |
immune system | 2.71e-14 | 93 |
bone element | 3.87e-14 | 82 |
bone marrow | 4.97e-14 | 76 |
lateral plate mesoderm | 1.23e-13 | 203 |
skeletal element | 2.69e-10 | 90 |
skeletal system | 2.71e-08 | 100 |