FFCP PHASE1:Hg19::chr1:209797057..209797070,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422894 | |EntrezGene=100422894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=38179 | |HGNC=38179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-202bp_to_NR_036213_5end | |association_with_transcript=-202bp_to_NR_036213_5end | ||
|cluster_id=chr1:209797057..209797070,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_5_at_MIR4260_5end | |description=CAGE_peak_5_at_MIR4260_5end | ||
|id=chr1:209797057..209797070,- | |id=chr1:209797057..209797070,- | ||
|ontology_enrichment_celltype=CL:0002076!3.06e-16!43;CL:0002368!4.73e-12!13;CL:0002328!1.30e-11!3;CL:0002621!3.21e-11!3;CL:0000223!8.25e-11!59;CL:0002251!5.01e-09!21;CL:0000317!1.53e-08!2;CL:1000448!1.53e-08!2;CL:0002308!1.53e-08!2;CL:0002140!1.53e-08!2;CL:0000362!3.04e-07!8 | |ontology_enrichment_celltype=CL:0002076!3.06e-16!43;CL:0002368!4.73e-12!13;CL:0002328!1.30e-11!3;CL:0002621!3.21e-11!3;CL:0000223!8.25e-11!59;CL:0002251!5.01e-09!21;CL:0000317!1.53e-08!2;CL:1000448!1.53e-08!2;CL:0002308!1.53e-08!2;CL:0002140!1.53e-08!2;CL:0000362!3.04e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000317;6.30e-21;2!CL:1000448;6.30e-21;2!CL:0002308;6.30e-21;2!CL:0002140;6.30e-21;2!CL:0000333;2.53e-09;5!CL:0000622;3.35e-09;5!CL:0000154;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,6.96e-21,2;CL:1000448,6.96e-21,2;CL:0002308,6.96e-21,2;CL:0002140,6.96e-21,2;CL:0000622,3.49e-09,5;CL:0000154,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.99e-63;10!DOID:3095;2.28e-29;22!DOID:2994;2.28e-29;22!DOID:169;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.84e-63,10;DOID:3095,2.19e-29,22;DOID:2994,2.19e-29,22;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0004815!1.30e-11!3;UBERON:0002031!1.30e-11!3;UBERON:0001949!3.21e-11!3;UBERON:0000924!7.26e-11!173;UBERON:0006601!7.26e-11!173;UBERON:0001869!9.98e-10!32;UBERON:0001893!4.78e-09!34;UBERON:0002185!8.34e-09!4;UBERON:0000956!1.23e-08!25;UBERON:0000203!1.23e-08!25;UBERON:0002419!1.53e-08!2;UBERON:0007771!1.53e-08!2;UBERON:0003297!1.53e-08!2;UBERON:0001821!1.53e-08!2;UBERON:0003487!1.53e-08!2;UBERON:0001820!1.53e-08!2;UBERON:0005089!1.53e-08!2;UBERON:0005088!1.53e-08!2;UBERON:0004121!2.12e-08!169;UBERON:0001829!3.14e-08!2;UBERON:0002619!6.48e-08!22;UBERON:0002791!9.39e-08!33;UBERON:0002020!1.76e-07!34;UBERON:0003528!1.76e-07!34;UBERON:0001004!3.40e-07!72;UBERON:0002780!3.48e-07!41;UBERON:0001890!3.48e-07!41;UBERON:0006240!3.48e-07!41;UBERON:0000166!4.00e-07!21;UBERON:0003080!5.71e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.21e-88;4!UBERON:0000923;1.21e-88;4!UBERON:0010316;1.21e-88;4!UBERON:0005291;1.21e-88;4!UBERON:0002050;3.62e-71;5!UBERON:0005423;3.62e-71;5!UBERON:0002419;6.30e-21;2!UBERON:0007771;6.30e-21;2!UBERON:0003297;6.30e-21;2!UBERON:0001821;6.30e-21;2!UBERON:0003487;6.30e-21;2!UBERON:0001820;6.30e-21;2!UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,6.96e-21,2;UBERON:0007771,6.96e-21,2;UBERON:0003297,6.96e-21,2;UBERON:0001821,6.96e-21,2;UBERON:0003487,6.96e-21,2;UBERON:0001820,6.96e-21,2;UBERON:0005089,6.96e-21,2;UBERON:0005088,6.96e-21,2;UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.447792613514241,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8513499880569,0,0,1.2754495206101,2.47871528518004,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0.548257766857182,0,2.11045493231545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@MIR4260 | |short_description=p5@MIR4260 | ||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p5@MIR4260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MIR4260_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | -202bp_to_NR_036213_5end |
EntrezGene: | MIR4260 |
HGNC: | 38179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 6.96e-21 | 2 |
epithelial cell of sweat gland | 6.96e-21 | 2 |
epithelial cell of skin gland | 6.96e-21 | 2 |
acinar cell of sebaceous gland | 6.96e-21 | 2 |
acinar cell | 3.49e-09 | 5 |
protein secreting cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 6.96e-21 | 2 |
epidermis gland | 6.96e-21 | 2 |
gland of integumental system | 6.96e-21 | 2 |
sebaceous gland | 6.96e-21 | 2 |
skin sebaceous gland | 6.96e-21 | 2 |
sweat gland | 6.96e-21 | 2 |
sweat gland placode | 6.96e-21 | 2 |
sebaceous gland placode | 6.96e-21 | 2 |
sympathetic nervous system | 2.53e-09 | 5 |
autonomic nervous system | 2.53e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.84e-63 | 10 |
germ cell and embryonal cancer | 2.19e-29 | 22 |
germ cell cancer | 2.19e-29 | 22 |
neuroendocrine tumor | 5.54e-08 | 6 |