FFCP PHASE1:Hg19::chr1:209797028..209797042,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422894 | |EntrezGene=100422894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=38179 | |HGNC=38179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-173bp_to_NR_036213_5end | |association_with_transcript=-173bp_to_NR_036213_5end | ||
|cluster_id=chr1:209797028..209797042,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_3_at_MIR4260_5end | |description=CAGE_peak_3_at_MIR4260_5end | ||
|id=chr1:209797028..209797042,- | |id=chr1:209797028..209797042,- | ||
|ontology_enrichment_celltype=CL:0002076!1.15e-14!43;CL:0002368!7.61e-13!13;CL:0000066!1.73e-11!254;CL:0000223!9.04e-11!59;CL:0002621!1.37e-09!3;CL:0000240!5.87e-08!6;CL:0000311!5.87e-08!6;CL:0000079!5.87e-08!6;CL:0000237!5.87e-08!6;CL:0000036!5.87e-08!6;CL:0000357!5.87e-08!6;CL:0000114!5.87e-08!6;CL:0000244!5.47e-07!4;CL:0000731!5.47e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.15e-14!43;CL:0002368!7.61e-13!13;CL:0000066!1.73e-11!254;CL:0000223!9.04e-11!59;CL:0002621!1.37e-09!3;CL:0000240!5.87e-08!6;CL:0000311!5.87e-08!6;CL:0000079!5.87e-08!6;CL:0000237!5.87e-08!6;CL:0000036!5.87e-08!6;CL:0000357!5.87e-08!6;CL:0000114!5.87e-08!6;CL:0000244!5.47e-07!4;CL:0000731!5.47e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.43e-20;13!CL:0000307;9.90e-11;3!CL:0000333;4.79e-07;5!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.43e-20,13;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0000312,6.39e-07,5;CL:0002076,9.81e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.89e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.89e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.37e-09!3;UBERON:0000365!2.68e-09!5;UBERON:0004119!8.07e-08!169;UBERON:0000925!8.07e-08!169;UBERON:0006595!8.07e-08!169;UBERON:0005910!9.80e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.82e-08;4!UBERON:0000923;1.82e-08;4!UBERON:0010316;1.82e-08;4!UBERON:0005291;1.82e-08;4!UBERON:0000013;4.79e-07;5!UBERON:0002410;4.79e-07;5!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.79e-07,5;UBERON:0002410,4.79e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,1.1240175325762,0.603173834469785,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.460404944679482,0,0,0,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,1.53752053892085,0.382838137483752,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,16.0411260693014,0,0,0,2.97445834221605,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.126831620387814,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MIR4260 | |short_description=p3@MIR4260 | ||
}} | }} |
Latest revision as of 19:25, 24 September 2015
Short description: | p3@MIR4260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR4260_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | -173bp_to_NR_036213_5end |
EntrezGene: | MIR4260 |
HGNC: | 38179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.43e-20 | 13 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
keratinocyte | 6.39e-07 | 5 |
endo-epithelial cell | 9.81e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.79e-07 | 5 |
autonomic nervous system | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.89e-12 | 10 |