FFCP PHASE1:Hg19::chr5:135382957..135382978,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENST00000508767_5end | |||
|cluster_id=chr5:135382957..135382978,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_12_at_TGFBI_5end | |||
|id=chr5:135382957..135382978,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.87e-28!180;CL:0002371!2.54e-18!591;CL:0000144!1.07e-17!625;CL:0000680!5.08e-17!57;CL:0000056!5.08e-17!57;CL:0000355!5.08e-17!57;CL:0000548!5.25e-16!679;CL:0000004!5.25e-16!679;CL:0000255!5.25e-16!679;CL:0000057!1.99e-15!75;CL:0000183!2.16e-15!59;CL:0000012!2.33e-15!682;CL:0000187!2.60e-15!54;CL:0000048!1.50e-14!430;CL:0000723!4.03e-14!436;CL:0000192!3.92e-13!42;CL:0000514!3.92e-13!42;CL:0000034!9.87e-13!444;CL:0000393!1.61e-12!60;CL:0000211!1.61e-12!60;CL:0000359!4.12e-12!32;CL:0000003!6.68e-09!722;CL:0002334!3.76e-08!12;CL:0000222!1.41e-07!119;CL:0002620!3.46e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.10e-12;32!CL:0002334;5.56e-10;12!CL:0000192;5.23e-09;43!CL:0000187;1.56e-08;55!CL:0000499;1.05e-07;28!CL:0000393;4.49e-07;61!CL:0000211;4.49e-07;61!CL:0000327;7.63e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.06e-18,427;CL:0000680,6.35e-18,58;CL:0000056,6.35e-18,58;CL:0000355,6.35e-18,58;CL:0000723,1.69e-17,433;CL:0000034,2.50e-16,441;CL:0000187,1.08e-15,55;CL:0000057,4.24e-14,76;CL:0000359,4.46e-13,32;CL:0000393,6.95e-13,61;CL:0000211,6.95e-13,61;CL:0000192,1.55e-12,43;CL:0000514,1.55e-12,43;CL:0002334,7.85e-10,12;CL:0000499,5.99e-08,28;CL:0000134,1.29e-07,354;CL:0002320,1.33e-07,361;CL:0000327,5.43e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;1.91e-09;58!CL:0000514;5.23e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.26e-15!61;UBERON:0002036!3.26e-15!61;UBERON:0003082!3.26e-15!61;UBERON:0000486!5.09e-15!82;UBERON:0002385!2.13e-14!63;UBERON:0001015!2.13e-14!63;UBERON:0000383!2.13e-14!63;UBERON:0002204!7.63e-14!167;UBERON:0004290!1.02e-13!70;UBERON:0000914!3.92e-12!83;UBERON:0002329!3.92e-12!83;UBERON:0003077!3.92e-12!83;UBERON:0003059!3.92e-12!83;UBERON:0007282!3.92e-12!83;UBERON:0009618!3.92e-12!83;UBERON:0007285!3.92e-12!83;UBERON:0000490!6.89e-10!138;UBERON:0000926!8.02e-10!448;UBERON:0004120!8.02e-10!448;UBERON:0006603!8.02e-10!448;UBERON:0001637!8.36e-10!42;UBERON:0003509!8.36e-10!42;UBERON:0004572!8.36e-10!42;UBERON:0005256!3.19e-09!143;UBERON:0004573!1.85e-08!33;UBERON:0004571!1.85e-08!33;UBERON:0000468!4.45e-08!659;UBERON:0002100!8.43e-08!216;UBERON:0004872!2.43e-07!84;UBERON:0002384!6.70e-07!375;UBERON:0003081!8.92e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.90e-10;33!UBERON:0004571;5.90e-10;33!UBERON:0002385;3.50e-09;31!UBERON:0001015;3.50e-09;31!UBERON:0000383;3.50e-09;31!UBERON:0001637;1.04e-08;42!UBERON:0003509;1.04e-08;42!UBERON:0004572;1.04e-08;42!UBERON:0004457;3.57e-07;9!UBERON:0000042;3.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.21e-16,62;UBERON:0002036,1.21e-16,62;UBERON:0003082,1.21e-16,62;UBERON:0000486,6.09e-16,83;UBERON:0002385,1.14e-15,64;UBERON:0001015,1.14e-15,64;UBERON:0000383,1.14e-15,64;UBERON:0002329,3.00e-14,71;UBERON:0003059,3.00e-14,71;UBERON:0007282,3.00e-14,71;UBERON:0004290,3.00e-14,71;UBERON:0009618,3.00e-14,71;UBERON:0007524,3.91e-14,73;UBERON:0003077,7.50e-14,72;UBERON:0007285,7.50e-14,72;UBERON:0007503,3.30e-13,78;UBERON:0001637,1.48e-12,42;UBERON:0003509,1.48e-12,42;UBERON:0004572,1.48e-12,42;UBERON:0004573,3.43e-11,33;UBERON:0004571,3.43e-11,33;UBERON:0002204,1.54e-10,167;UBERON:0000926,2.36e-10,315;UBERON:0004120,2.36e-10,315;UBERON:0006603,2.36e-10,315;UBERON:0005256,3.03e-10,122;UBERON:0002384,4.13e-08,371;UBERON:0003104,4.49e-08,160;UBERON:0009142,4.49e-08,160;UBERON:0004872,4.99e-08,83;UBERON:0000490,6.39e-08,148;UBERON:0002100,4.39e-07,199;UBERON:0007500,5.01e-07,59;UBERON:0001981,5.01e-07,59;UBERON:0004537,5.01e-07,59;UBERON:0006965,5.01e-07,59 | |||
|phase1_expression=5.63202975738726,7.27941781229343,4.79244973926302,1.0007329835313,5.36353313312745,2.61701557230111,0,2.52687949370732,0,1.22866968250754,2.79120467188971,4.36882744260345,2.90143676051299,0.37129905888014,0,7.39557661096953,9.04041792035965,8.76372108464848,7.80692478064811,4.18611597461079,2.44800829493104,2.82109249330279,0.572471974262113,1.91624195102038,0.87879847716362,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,0.90361775633475,1.10926203050036,0,0,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0.257575567634187,2.76256653681173,0.755751887377619,0.970336244751265,1.85943229524548,0.411167888021826,0.619412741790207,1.1507695692886,1.2808035326455,1.18241114944293,0.689491361473237,0,2.70852973188684,1.31769637679823,3.0019676506363,1.57306439111559,3.67300670845083,0,1.27867425159808,3.62836430205388,2.19410023383795,1.70489900213078,0.290209238628584,1.13477044938228,0,2.00998932205395,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.901061357049038,0.803627933485401,0,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,0.511450247374121,2.53007406669196,6.01605492763067,12.4568006306308,4.7717156823066,23.8451086448292,1.22895262313288,5.98669373148923,3.77689578480442,0,0.364295288292542,0.370784442784429,0.649094787309367,2.43781632218974,4.78648657867915,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,10.933382937297,2.40597972162702,0.794455084879313,9.46560848471085,1.77334191099179,2.24271040056923,2.1349799145941,7.89336154934912,0.311211035399766,0.808264032418128,0.490385709340376,0.454072282934794,1.72852777344,0.70296429550139,1.87296046098192,0,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0.408308342509787,0.245668634623536,0.723280468230358,0,1.48360157567134,1.82032272387605,1.43723628363248,0,0,0,0.438977620880838,0.919463387397059,2.25357088359895,1.02088964844019,6.45802688479903,3.84403299873421,2.7551147150743,8.70264178644767,3.09157587715317,8.24449728146013,4.09457083929498,12.3206722536124,9.15907848515267,8.33031455005578,3.86609574297657,0.969876340912871,21.3005755509969,7.95941575998358,0.847802961552438,0.57978255948989,1.63647672354501,0.286804595389004,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,2.80483547606892,2.8810180793198,2.94017422771084,0,0,0,0,0,2.57351715447788,0.658501712451753,0,0.201057944823262,0.185176890317059,0,1.03993478527958,1.44331342025273,0.231860809950154,0.587043471179108,0,0,0,0,0,0.984868024349589,0.936017060556951,1.48631162288728,0,6.2153387433578,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.336393253036082,2.61576041299968,0.1466765716419,1.42198887333556,7.15312891703765,5.917119267892,0.26593811658487,0,0.257207374262142,0,0,2.85955987316295,5.96883765930587,1.64648067356154,1.30294473717494,2.48774364119782,4.75171123760058,0.602878754119172,0.871533458600294,0.899756920638513,1.2162378064119,2.00902836572851,0,0.718874566474748,1.14861935834114,0,3.18518874668674,6.36976599906189,9.31117008847457,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.59498939234882,4.00136416847742,0.542530047399471,3.53550464602372,2.67643483195743,0.157702415033935,1.05427273493442,0.902838299183157,4.5481500811197,1.03473071292505,3.98535359121262,2.58116835958384,0.434418072340414,0.391602314925481,0.343143423810856,0,0.431428401637234,0.426910231213777,0.303127571446259,1.66435439510497,5.74541557326393,6.20269519546942,5.52463103837025,15.155645099386,11.2762451345017,4.09365799253363,7.88184213603677,5.93672265779964,3.23840356985577,3.55123450626254,0.9033987161519,6.23105315020345,2.09178681227927,0.120859449591622,3.60911646545913,0.0920809889358963,2.52591785962135,1.63882051206045,4.72047893853927,0,0.15403067420883,0,0,1.05551628892876,0,0.170093705276516,0.647747748306418,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,1.72279661398852,0.650060246036521,1.6068392984416,1.35339005608971,2.46477787383431,3.37708084397485,1.65403886981437,3.43744783578476,2.75531718437034,2.81247870473133,1.78064071293475,1.32227932288782,2.11409074101617,0.765676274967505,1.0115778085555,0,13.5369309137175,2.0911118104818,0.616067160352178,1.59691809095107,1.73986598415015,3.15051172476664,3.43499728180779,0.372158369359667,0.316379424718726,0.762520775695299,0,0,1.90921948755562,7.06453776179307,0.719489830333259,3.56898138656871,2.23843564456804,1.81964233415984,1.58510321173008,4.21258456238981,0.975267478179181,2.19342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| |||
|short_description=p12@TGFBI | |||
}} |
Latest revision as of 19:24, 24 September 2015
Short description: | p12@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -34bp_to_ENST00000508767_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.06e-18 | 427 |
muscle precursor cell | 6.35e-18 | 58 |
myoblast | 6.35e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.35e-18 | 58 |
somatic stem cell | 1.69e-17 | 433 |
stem cell | 2.50e-16 | 441 |
muscle cell | 1.08e-15 | 55 |
fibroblast | 4.24e-14 | 76 |
vascular associated smooth muscle cell | 4.46e-13 | 32 |
electrically responsive cell | 6.95e-13 | 61 |
electrically active cell | 6.95e-13 | 61 |
smooth muscle cell | 1.55e-12 | 43 |
smooth muscle myoblast | 1.55e-12 | 43 |
preadipocyte | 7.85e-10 | 12 |
stromal cell | 5.99e-08 | 28 |
mesenchymal cell | 1.29e-07 | 354 |
connective tissue cell | 1.33e-07 | 361 |
extracellular matrix secreting cell | 5.43e-07 | 15 |