FFCP PHASE1:Hg19::chr7:102574569..102574589,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10234 | |EntrezGene=10234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16895 | |HGNC=16895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=208bp_to_EU832314,EU832399_5end | |association_with_transcript=208bp_to_EU832314,EU832399_5end | ||
|cluster_id=chr7:102574569..102574589,+ | |||
|description=CAGE_peak_4_at_LRRC17_5end | |description=CAGE_peak_4_at_LRRC17_5end | ||
|id=chr7:102574569..102574589,+ | |id=chr7:102574569..102574589,+ | ||
|ontology_enrichment_celltype=CL:0000680!2.49e-30!57;CL:0000056!2.49e-30!57;CL:0000355!2.49e-30!57;CL:0000187!5.98e-30!54;CL:0000393!5.60e-28!60;CL:0000211!5.60e-28!60;CL:0000192!2.53e-27!42;CL:0000514!2.53e-27!42;CL:0000183!4.43e-26!59;CL:0000359!1.13e-22!32;CL:0000055!4.16e-20!180;CL:0002539!2.16e-13!10;CL:0002494!1.18e-11!16;CL:0000222!6.93e-08!119 | |ontology_enrichment_celltype=CL:0000680!2.49e-30!57;CL:0000056!2.49e-30!57;CL:0000355!2.49e-30!57;CL:0000187!5.98e-30!54;CL:0000393!5.60e-28!60;CL:0000211!5.60e-28!60;CL:0000192!2.53e-27!42;CL:0000514!2.53e-27!42;CL:0000183!4.43e-26!59;CL:0000359!1.13e-22!32;CL:0000055!4.16e-20!180;CL:0002539!2.16e-13!10;CL:0002494!1.18e-11!16;CL:0000222!6.93e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.84e-32;32!CL:0002539;9.21e-29;10!CL:0000192;5.20e-25;43!CL:0000187;2.63e-17;55!CL:0002494;2.04e-16;16!CL:0000569;5.70e-13;4!CL:0000393;7.05e-13;61!CL:0000211;7.05e-13;61!CL:1000306;1.23e-12;4!CL:0002547;1.23e-12;4!CL:0002595;6.65e-09;5!CL:0000048;1.69e-07;58!CL:0000134;4.42e-07;55!CL:0000737;5.02e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.39e-34,32;CL:0000192,1.94e-31,43;CL:0000514,1.94e-31,43;CL:0000187,2.91e-30,55;CL:0002539,7.17e-29,10;CL:0000680,2.60e-28,58;CL:0000056,2.60e-28,58;CL:0000355,2.60e-28,58;CL:0000393,1.48e-26,61;CL:0000211,1.48e-26,61;CL:0002494,1.53e-16,16;CL:0000569,6.55e-13,4;CL:0000011,6.55e-13,4;CL:1000306,1.33e-12,4;CL:0002547,1.33e-12,4;CL:0000222,5.55e-11,121;CL:0000048,1.75e-10,427;CL:0000723,3.81e-10,433;CL:0000034,1.04e-09,441;CL:0002595,4.98e-09,5;CL:0000737,4.44e-07,4;CL:0002583,9.23e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;5.20e-25;43!CL:0000355;2.13e-16;58!CL:0000011;5.70e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!1.72e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.92e-15;14!DOID:0060084;7.95e-09;3!DOID:127;7.95e-09;3!DOID:120;5.19e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.20e-15,14;DOID:0060084,7.45e-09,3;DOID:127,7.45e-09,3;DOID:120,4.72e-07,27;DOID:0060072,9.76e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.86e-27!61;UBERON:0002036!2.86e-27!61;UBERON:0003082!2.86e-27!61;UBERON:0002385!6.81e-26!63;UBERON:0001015!6.81e-26!63;UBERON:0000383!6.81e-26!63;UBERON:0000914!1.80e-25!83;UBERON:0002329!1.80e-25!83;UBERON:0003077!1.80e-25!83;UBERON:0003059!1.80e-25!83;UBERON:0007282!1.80e-25!83;UBERON:0009618!1.80e-25!83;UBERON:0007285!1.80e-25!83;UBERON:0004290!3.66e-25!70;UBERON:0004573!2.29e-23!33;UBERON:0004571!2.29e-23!33;UBERON:0004872!7.51e-22!84;UBERON:0000486!2.31e-21!82;UBERON:0001637!3.86e-19!42;UBERON:0003509!3.86e-19!42;UBERON:0004572!3.86e-19!42;UBERON:0005256!2.01e-16!143;UBERON:0004535!7.95e-16!110;UBERON:0001981!1.96e-15!60;UBERON:0007500!1.96e-15!60;UBERON:0004537!1.96e-15!60;UBERON:0006965!1.96e-15!60;UBERON:0001009!5.81e-15!113;UBERON:0000490!4.13e-14!138;UBERON:0002049!8.46e-14!79;UBERON:0007798!8.46e-14!79;UBERON:0004237!2.16e-13!10;UBERON:0004695!2.16e-13!10;UBERON:0002111!2.16e-13!10;UBERON:0004178!2.16e-13!10;UBERON:0003914!6.30e-13!118;UBERON:0001135!8.94e-13!15;UBERON:0000055!6.19e-12!69;UBERON:0000947!6.93e-12!21;UBERON:0010191!6.93e-12!21;UBERON:0000948!7.36e-12!24;UBERON:0005498!7.36e-12!24;UBERON:0004140!7.36e-12!24;UBERON:0009881!7.36e-12!24;UBERON:0004141!7.36e-12!24;UBERON:0003084!7.36e-12!24;UBERON:0007005!7.36e-12!24;UBERON:0004139!7.36e-12!24;UBERON:0004291!7.36e-12!24;UBERON:0002100!4.12e-11!216;UBERON:0000475!1.91e-10!365;UBERON:0000992!2.10e-10!13;UBERON:0007100!6.47e-10!27;UBERON:0000481!1.07e-09!347;UBERON:0003104!2.15e-09!238;UBERON:0009142!2.15e-09!238;UBERON:0005156!5.05e-09!59;UBERON:0000990!5.05e-09!59;UBERON:0000991!5.46e-09!21;UBERON:0009196!5.46e-09!21;UBERON:0009117!5.46e-09!21;UBERON:0005564!5.46e-09!21;UBERON:0000468!1.09e-08!659;UBERON:0004176!2.19e-08!22;UBERON:0000119!7.20e-08!312;UBERON:0000483!7.58e-08!309;UBERON:0000926!1.69e-07!448;UBERON:0004120!1.69e-07!448;UBERON:0006603!1.69e-07!448;UBERON:0000467!3.98e-07!625;UBERON:0000480!4.72e-07!626;UBERON:0002118!8.26e-07!5;UBERON:0004532!8.26e-07!5;UBERON:0000477!9.85e-07!286 | |ontology_enrichment_uberon=UBERON:0001134!2.86e-27!61;UBERON:0002036!2.86e-27!61;UBERON:0003082!2.86e-27!61;UBERON:0002385!6.81e-26!63;UBERON:0001015!6.81e-26!63;UBERON:0000383!6.81e-26!63;UBERON:0000914!1.80e-25!83;UBERON:0002329!1.80e-25!83;UBERON:0003077!1.80e-25!83;UBERON:0003059!1.80e-25!83;UBERON:0007282!1.80e-25!83;UBERON:0009618!1.80e-25!83;UBERON:0007285!1.80e-25!83;UBERON:0004290!3.66e-25!70;UBERON:0004573!2.29e-23!33;UBERON:0004571!2.29e-23!33;UBERON:0004872!7.51e-22!84;UBERON:0000486!2.31e-21!82;UBERON:0001637!3.86e-19!42;UBERON:0003509!3.86e-19!42;UBERON:0004572!3.86e-19!42;UBERON:0005256!2.01e-16!143;UBERON:0004535!7.95e-16!110;UBERON:0001981!1.96e-15!60;UBERON:0007500!1.96e-15!60;UBERON:0004537!1.96e-15!60;UBERON:0006965!1.96e-15!60;UBERON:0001009!5.81e-15!113;UBERON:0000490!4.13e-14!138;UBERON:0002049!8.46e-14!79;UBERON:0007798!8.46e-14!79;UBERON:0004237!2.16e-13!10;UBERON:0004695!2.16e-13!10;UBERON:0002111!2.16e-13!10;UBERON:0004178!2.16e-13!10;UBERON:0003914!6.30e-13!118;UBERON:0001135!8.94e-13!15;UBERON:0000055!6.19e-12!69;UBERON:0000947!6.93e-12!21;UBERON:0010191!6.93e-12!21;UBERON:0000948!7.36e-12!24;UBERON:0005498!7.36e-12!24;UBERON:0004140!7.36e-12!24;UBERON:0009881!7.36e-12!24;UBERON:0004141!7.36e-12!24;UBERON:0003084!7.36e-12!24;UBERON:0007005!7.36e-12!24;UBERON:0004139!7.36e-12!24;UBERON:0004291!7.36e-12!24;UBERON:0002100!4.12e-11!216;UBERON:0000475!1.91e-10!365;UBERON:0000992!2.10e-10!13;UBERON:0007100!6.47e-10!27;UBERON:0000481!1.07e-09!347;UBERON:0003104!2.15e-09!238;UBERON:0009142!2.15e-09!238;UBERON:0005156!5.05e-09!59;UBERON:0000990!5.05e-09!59;UBERON:0000991!5.46e-09!21;UBERON:0009196!5.46e-09!21;UBERON:0009117!5.46e-09!21;UBERON:0005564!5.46e-09!21;UBERON:0000468!1.09e-08!659;UBERON:0004176!2.19e-08!22;UBERON:0000119!7.20e-08!312;UBERON:0000483!7.58e-08!309;UBERON:0000926!1.69e-07!448;UBERON:0004120!1.69e-07!448;UBERON:0006603!1.69e-07!448;UBERON:0000467!3.98e-07!625;UBERON:0000480!4.72e-07!626;UBERON:0002118!8.26e-07!5;UBERON:0004532!8.26e-07!5;UBERON:0000477!9.85e-07!286 | ||
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| ||
|short_description=p4@LRRC17 | |short_description=p4@LRRC17 | ||
}} | }} |
Latest revision as of 19:16, 24 September 2015
Short description: | p4@LRRC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC17_5end |
Coexpression cluster: | NA |
Association with transcript: | 208bp_to_EU832314, EU832399_5end |
EntrezGene: | LRRC17 |
HGNC: | 16895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.39e-34 | 32 |
smooth muscle cell | 1.94e-31 | 43 |
smooth muscle myoblast | 1.94e-31 | 43 |
muscle cell | 2.91e-30 | 55 |
aortic smooth muscle cell | 7.17e-29 | 10 |
muscle precursor cell | 2.60e-28 | 58 |
myoblast | 2.60e-28 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-28 | 58 |
electrically responsive cell | 1.48e-26 | 61 |
electrically active cell | 1.48e-26 | 61 |
cardiocyte | 1.53e-16 | 16 |
cardiac mesenchymal cell | 6.55e-13 | 4 |
migratory trunk neural crest cell | 6.55e-13 | 4 |
fibroblast of tunica adventitia of artery | 1.33e-12 | 4 |
fibroblast of the aortic adventitia | 1.33e-12 | 4 |
mesodermal cell | 5.55e-11 | 121 |
multi fate stem cell | 1.75e-10 | 427 |
somatic stem cell | 3.81e-10 | 433 |
stem cell | 1.04e-09 | 441 |
smooth muscle cell of the subclavian artery | 4.98e-09 | 5 |
striated muscle cell | 4.44e-07 | 4 |
subcutaneous preadipocyte | 9.23e-07 | 2 |
Ontology term | p-value | n |
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