FFCP PHASE1:Hg19::chr8:101225371..101225415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6674 | |EntrezGene=6674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11212 | |HGNC=11212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000523302_5end | |association_with_transcript=56bp_to_ENST00000523302_5end | ||
|cluster_id=chr8:101225371..101225415,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_SPAG1_5end | |description=CAGE_peak_4_at_SPAG1_5end | ||
|id=chr8:101225371..101225415,+ | |id=chr8:101225371..101225415,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.02e-23!42;CL:0000766!7.98e-23!76;CL:0000860!9.59e-23!45;CL:0000557!2.17e-21!71;CL:0000738!4.64e-19!140;CL:0002009!1.09e-18!65;CL:0000839!1.89e-18!70;CL:0002194!1.78e-17!63;CL:0000576!1.78e-17!63;CL:0000040!1.78e-17!63;CL:0000559!1.78e-17!63;CL:0002031!1.35e-15!124;CL:0000037!1.76e-14!172;CL:0000566!1.76e-14!172;CL:0002087!2.52e-14!119;CL:0000763!7.03e-14!112;CL:0000049!7.03e-14!112;CL:0000988!3.94e-13!182;CL:0002032!1.99e-12!165;CL:0000837!1.99e-12!165 | |ontology_enrichment_celltype=CL:0002057!5.02e-23!42;CL:0000766!7.98e-23!76;CL:0000860!9.59e-23!45;CL:0000557!2.17e-21!71;CL:0000738!4.64e-19!140;CL:0002009!1.09e-18!65;CL:0000839!1.89e-18!70;CL:0002194!1.78e-17!63;CL:0000576!1.78e-17!63;CL:0000040!1.78e-17!63;CL:0000559!1.78e-17!63;CL:0002031!1.35e-15!124;CL:0000037!1.76e-14!172;CL:0000566!1.76e-14!172;CL:0002087!2.52e-14!119;CL:0000763!7.03e-14!112;CL:0000049!7.03e-14!112;CL:0000988!3.94e-13!182;CL:0002032!1.99e-12!165;CL:0000837!1.99e-12!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.89e-28;33!CL:0002057;6.89e-28;33!CL:0000576;7.82e-23;48!CL:0000473;5.46e-19;39!CL:0000234;5.46e-19;39!CL:0000766;2.14e-18;69!CL:0002087;1.12e-08;104!CL:0000094;1.51e-08;8!CL:0000763;5.12e-08;100!CL:0000738;7.36e-08;136!CL:0000081;3.59e-07;11!CL:0002393;5.26e-07;6!CL:0002397;5.26e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-39,42;CL:0002057,1.18e-39,42;CL:0000766,1.47e-37,72;CL:0000557,4.08e-34,67;CL:0000738,5.76e-33,136;CL:0000473,7.81e-33,48;CL:0000234,7.81e-33,48;CL:0002009,6.99e-30,61;CL:0000839,3.25e-29,66;CL:0002194,1.25e-27,59;CL:0000576,1.25e-27,59;CL:0000040,1.25e-27,59;CL:0000559,1.25e-27,59;CL:0000037,2.97e-25,168;CL:0002031,9.55e-25,120;CL:0000763,6.00e-24,108;CL:0000049,6.00e-24,108;CL:0000988,1.36e-23,177;CL:0002087,4.44e-23,115;CL:0002032,1.14e-21,161;CL:0000837,1.14e-21,161;CL:0002393,1.11e-09,9;CL:0002397,1.11e-09,9;CL:0000094,1.58e-08,8;CL:0000081,2.74e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.73e-28;42!CL:0000049;6.28e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.04e-19!102;UBERON:0003061!1.04e-19!102;UBERON:0002193!1.68e-18!112;UBERON:0002371!4.15e-17!80;UBERON:0001474!8.98e-16!86;UBERON:0004765!7.34e-15!101;UBERON:0001434!7.34e-15!101;UBERON:0002405!1.92e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.98e-32,98;UBERON:0003061,4.98e-32,98;UBERON:0002371,7.62e-31,76;UBERON:0002193,3.28e-30,108;UBERON:0001474,1.40e-28,82;UBERON:0004765,1.79e-28,90;UBERON:0002405,5.71e-25,93;UBERON:0001434,8.83e-24,100;UBERON:0003081,2.33e-10,203;UBERON:0002204,2.98e-08,167 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.382067028739756,0.57470412614962,0.550975469195755,3.14691421479123,1.53531759238885,3.40595471295367,0,0,0.739508020333575,0.232401601740905,0,2.93600439334847,2.76997704265939,3.81034450193269,3.68918480216948,0,0,0,4.21654892460738,2.26725566213286,1.69808842831471,4.18372266430232,2.05583944010913,2.16794459626573,3.45230870786581,2.0492856522328,1.89185783910868,5.5159308917859,2.5819387343353,1.35426486594342,3.20011977222428,2.18324920046277,2.47195832889593,5.20342617030534,3.20929027076094,1.27867425159808,3.62836430205388,0.997318288108159,2.98357325372886,5.80418477257168,0.56738522469114,2.4912889959823,2.26123798731069,2.60741459210101,2.38907729175628,5.44859552370032,2.57794345191295,6.96217252369946,1.90129757680748,1.70083439972035,1.04829322754188,1.57260083605093,3.90459921387916,1.12507910687956,1.14005097496499,1.9891667719909,2.19196984517561,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,0.587237189370939,1.91136614062614,5.28685314316103,3.92355994087075,1.05353633910031,3.93419540227666,4.32311839024081,2.46721798799411,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.650296737799391,0.328875809207352,0.829050053357545,0,0.296573126324121,0.802622484269139,0,0,0.766440987203842,0.68725489096526,0.506039384039006,0,0,0,0,0,1.24930726552346,0,0,5.84659555351724,6.95344509037119,3.33096128930438,0,0,0.255725123687061,0,0,0.434539556882471,0.795285947051099,0,0,0,0.087834785693126,0.523916301990851,0.364295288292542,0,0.324547393654683,0,0.664789802594326,1.90792499444274,1.14398982156026,0.371457501329565,0.993812036833525,0.860234595106124,0.347140501607594,0.56530794192401,0,0.550236083880135,0.626984899610432,0,0.35576626268671,1.00416183829401,0,0,0,0,0,0.535798369704479,0.44905874525234,0,1.53316637465883,0,0.183201743930407,7.9068250461638,15.511210565933,0,0,1.01304409331664,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.340296549480063,0.358779271377724,0,0,0.600182192168805,0.206105058476878,0,0.18611685633159,1.0126579934476,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.710019185033229,0.302256294682921,0.169560592310488,2.70565194428616,3.00020732649918,1.72082757233402,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.723033089650446,0.661763836394364,0.217879444092406,0,1.07865046528132,1.37355025587742,1.15424147083917,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0.491953754172454,0.171567810298526,1.64625428112938,0,0.703702806881416,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0.925971025153221,1.14152491340759,0,0,0.246217006087397,0.702012795417713,0.891786973732369,2.81201501960331,2.35174979478403,1.98485136139341,0.985143749731331,1.45316969256981,0.383382679165211,47.7883340759065,0.528290604079356,2.48793738648926,2.16179930125442,1.2624243342638,0.253991577168676,0,1.17217447210047,0,0.205654985406647,1.20137223137567,0.285826432630578,0,0,0.2933531432838,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,1.69954085009497,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0,0,0.448340575974109,2.75843064282698,3.66566877261179,3.59360501583295,0.254094624222463,1.30139853857622,0,0,0,8.98808428736619,0,16.5766205374414,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0,0.195801157462741,0,2.48121631347465,3.45142721309787,2.02782359826544,1.21251028578504,3.32870879020994,0,0,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,1.00253235151642,0.276242966807689,0.34444334449382,0,0,0,0.539107359730903,0,0,0,0,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0.447749509444357,0.219259876645935,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,1.14853107599234,1.95018073810956,1.6068392984416,0.290012154876366,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,2.49847087574638,1.91419068741876,0.708104465988849,0,0,1.3940745403212,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0,0.577332676353072,0,0,0.282431402330337,0.43050537267123,1.68471475667626,0.886860307073351,0.918893600827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| ||
|short_description=p4@SPAG1 | |short_description=p4@SPAG1 | ||
}} | }} |
Latest revision as of 19:12, 24 September 2015
Short description: | p4@SPAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPAG1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 56bp_to_ENST00000523302_5end |
EntrezGene: | SPAG1 |
HGNC: | 11212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.18e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-39 | 42 |
myeloid leukocyte | 1.47e-37 | 72 |
granulocyte monocyte progenitor cell | 4.08e-34 | 67 |
leukocyte | 5.76e-33 | 136 |
defensive cell | 7.81e-33 | 48 |
phagocyte | 7.81e-33 | 48 |
macrophage dendritic cell progenitor | 6.99e-30 | 61 |
myeloid lineage restricted progenitor cell | 3.25e-29 | 66 |
monopoietic cell | 1.25e-27 | 59 |
monocyte | 1.25e-27 | 59 |
monoblast | 1.25e-27 | 59 |
promonocyte | 1.25e-27 | 59 |
hematopoietic stem cell | 2.97e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 9.55e-25 | 120 |
myeloid cell | 6.00e-24 | 108 |
common myeloid progenitor | 6.00e-24 | 108 |
hematopoietic cell | 1.36e-23 | 177 |
nongranular leukocyte | 4.44e-23 | 115 |
hematopoietic oligopotent progenitor cell | 1.14e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-21 | 161 |
intermediate monocyte | 1.11e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.11e-09 | 9 |
granulocyte | 1.58e-08 | 8 |
blood cell | 2.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.98e-32 | 98 |
blood island | 4.98e-32 | 98 |
bone marrow | 7.62e-31 | 76 |
hemolymphoid system | 3.28e-30 | 108 |
bone element | 1.40e-28 | 82 |
skeletal element | 1.79e-28 | 90 |
immune system | 5.71e-25 | 93 |
skeletal system | 8.83e-24 | 100 |
lateral plate mesoderm | 2.33e-10 | 203 |
musculoskeletal system | 2.98e-08 | 167 |