FFCP PHASE1:Hg19::chr7:102153124..102153155,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:102153124..102153155,- to FFCP PHASE1:Hg19::chr7:102153124..102153155,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10156 | |EntrezGene=10156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23181 | |HGNC=23181 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z9G3 | |UniProt=B7Z9G3 | ||
|association_with_transcript=-247bp_to_AK315928_5end | |||
|cluster_id=chr7:102153124..102153155,- | |||
|description=CAGE_peak_1_at_RASA4_5end | |||
|id=chr7:102153124..102153155,- | |||
|ontology_enrichment_celltype=CL:0002009!1.98e-09!65;CL:0002057!4.11e-09!42;CL:0002194!4.47e-09!63;CL:0000576!4.47e-09!63;CL:0000040!4.47e-09!63;CL:0000559!4.47e-09!63;CL:0000557!1.48e-08!71;CL:0000766!3.71e-08!76;CL:0000839!8.22e-08!70;CL:0000860!1.03e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.86e-07;39!CL:0000234;8.86e-07;39!CL:0000860;9.08e-07;33!CL:0002057;9.08e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.73e-09,48;CL:0000234,1.73e-09,48;CL:0000860,9.02e-09,42;CL:0002057,9.02e-09,42;CL:0002009,9.88e-08,61;CL:0002194,1.08e-07,59;CL:0000576,1.08e-07,59;CL:0000040,1.08e-07,59;CL:0000559,1.08e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-18!115;UBERON:0001049!4.85e-12!57;UBERON:0005068!4.85e-12!57;UBERON:0006241!4.85e-12!57;UBERON:0007135!4.85e-12!57;UBERON:0002204!7.45e-11!167;UBERON:0003080!8.13e-10!42;UBERON:0002780!1.61e-09!41;UBERON:0001890!1.61e-09!41;UBERON:0006240!1.61e-09!41;UBERON:0002616!2.48e-09!59;UBERON:0001869!2.81e-09!32;UBERON:0001893!3.21e-09!34;UBERON:0002791!6.26e-09!33;UBERON:0000955!6.50e-09!69;UBERON:0006238!6.50e-09!69;UBERON:0002020!9.89e-09!34;UBERON:0003528!9.89e-09!34;UBERON:0001017!1.09e-08!82;UBERON:0002619!2.05e-08!22;UBERON:0003075!2.73e-08!86;UBERON:0007284!2.73e-08!86;UBERON:0000468!3.03e-08!659;UBERON:0002346!6.97e-08!90;UBERON:0005743!7.37e-08!86;UBERON:0001474!1.35e-07!86;UBERON:0000073!1.50e-07!94;UBERON:0001016!1.50e-07!94;UBERON:0000956!1.91e-07!25;UBERON:0000203!1.91e-07!25;UBERON:0003081!2.61e-07!216;UBERON:0000467!2.96e-07!625;UBERON:0001950!3.05e-07!20;UBERON:0002371!3.77e-07!80;UBERON:0000480!4.33e-07!626;UBERON:0004765!8.52e-07!101;UBERON:0001434!8.52e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.05e-11;22!UBERON:0001950;2.31e-09;20!UBERON:0001869;2.79e-09;32!UBERON:0000956;4.13e-09;25!UBERON:0000203;4.13e-09;25!UBERON:0001893;7.17e-09;34!UBERON:0002791;1.63e-08;32!UBERON:0002780;1.20e-07;41!UBERON:0001890;1.20e-07;41!UBERON:0003528;1.77e-07;34!UBERON:0002020;1.77e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.47e-15,114;UBERON:0002619,5.44e-12,22;UBERON:0001869,3.94e-11,32;UBERON:0001893,5.81e-11,34;UBERON:0001049,1.72e-10,56;UBERON:0005068,1.72e-10,56;UBERON:0006241,1.72e-10,56;UBERON:0007135,1.72e-10,56;UBERON:0002780,2.77e-10,41;UBERON:0001890,2.77e-10,41;UBERON:0003080,2.77e-10,41;UBERON:0006240,2.77e-10,41;UBERON:0001950,3.24e-10,20;UBERON:0002791,3.80e-10,32;UBERON:0000956,7.59e-10,25;UBERON:0000203,7.59e-10,25;UBERON:0000073,1.24e-09,53;UBERON:0002616,1.24e-09,53;UBERON:0003528,3.87e-09,34;UBERON:0002020,3.87e-09,34;UBERON:0003075,2.86e-08,82;UBERON:0007284,2.86e-08,82;UBERON:0002346,5.44e-08,86;UBERON:0002204,1.10e-07,167;UBERON:0010314,6.93e-07,132 | |||
|phase1_expression=1.09007027562334,0,4.93340414335899,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,1.10808952269109,0.408001382488506,0,0.572471974262113,0,0.376627918784408,0.534893840235659,0.57470412614962,0.236132343941038,4.32700704533794,0.383829398097213,2.63187409637329,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,1.10799081706375,1.80490002723128,1.30206522429511,0.895661896959697,2.26725566213286,1.28787783817093,0.436194716338694,5.29026321164333,1.21292030593908,0.464858073811369,2.87817521615278,0.619412741790207,1.1507695692886,2.30544635876191,0.47296445977717,1.03423704220986,5.16387746867061,0,0.376484679085209,2.45615535052061,1.12361742222542,0.612167784741805,5.45579346029359,1.91801137739712,1.31940520074686,2.99195486432448,0,0.580418477257168,2.8369261234557,1.86846674698672,1.00499466102697,3.12889751052121,1.3031330682307,0,5.89244217580104,1.26584954976354,1.26753171787165,3.61427309940574,2.72556239160889,0.22465726229299,1.20141514273205,2.08943262706204,0.855038231223746,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0.201606743224732,0.267440195783507,0,2.43806866313962,0.670700859703636,0.255725123687061,5.06014813338393,6.01605492763067,2.31754430337318,4.7717156823066,1.45990461090791,0.378139268656271,0.665188192387692,0.351339142772504,1.24430121722827,0,0,0,0.174129737299267,0.531831842075461,1.43094374583205,1.71598473234038,1.48583000531826,0.79504962946682,0,0.347140501607594,0,0,0.275118041940067,0,0.775250277507987,2.13459757612026,1.67360306382335,1.20848795132744,0.760272105718513,0,0.367663080345869,1.62028389576352,0.267899184852239,0,0,0,0.949265659568129,0,0,3.87780264148325,0,11.4303548889923,4.81195944325403,0.794455084879313,1.14734648299525,4.25602058638028,2.24271040056923,0,0.74000264525148,1.8672662123986,0.134710672069688,0,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.125118519871964,0,1.75591048352335,1.5324389789951,0.901428353439581,0,1.61450672119976,0.85422955527427,0.423863802319124,1.20036438433761,2.98852334791473,0.257640540045629,2.04728541964749,1.68776332241266,7.1129013767675,0.504867548488229,1.19664868234989,2.58633690910099,1.06502877754984,2.82105875037393,1.69560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.370353780634118,0.651616610620649,0,0,2.20267769452646,0.352226082707465,1.58803092537181,0,0.951270761172991,0,0,0.984868024349589,1.40402559083543,1.0404181360211,0,0.16798212819886,0,0,0,0,0.985326475791887,0,0.207328115540772,0.720599767084807,0.25248486685276,0.126995788584338,0.763976851116555,0,0,0,0.300343057843917,0,0.224262168690721,0,0.36669142910475,0.129271715757778,3.57656445851882,0,5.05282421511254,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.602878754119172,2.61460037580088,0.099972991182057,3.64871341923571,1.00451418286425,0,1.4377491329495,1.14861935834114,11.4109524032575,0.579125226670317,1.43833425785268,0.716243852959582,0,0,0,0.128343036279748,0,7.8083912314573,0,0.502548796003046,0.637938751653163,0,0,0,2.33113834266366,1.50051156317903,0.271265023699736,0.831883446123229,3.39015078714607,2.05013139544115,0.468565659970853,1.50473049863859,0,0,1.99267679560631,0.368738337083406,1.04260337361699,2.15381273209015,2.05886054286514,1.03384013061444,0.431428401637234,0.853820462427555,0,0,0,9.6762045049323,1.07423381301644,3.36792113319688,21.5273770749578,3.58195074346692,9.00781958404202,5.93672265779964,0.308419387605311,0.355123450626254,0.246381468041427,0,0.464841513839837,0,0,0,0.459257792658427,0.546273504020151,0.262248829918848,0.451199612907412,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0.680374821106063,0,0,0,1.50506932156456,0,0,0,0,0,0,0,0,1.33953315142039,0.27470839445503,0.165018999841176,0,0,3.21367859688319,1.7400729292582,0.462145851343933,0,0,0.537101224341368,0.435050081742686,0.0852266274161009,1.24644849905432,0,0,0,0,4.64845549297286,1.25924938732256,4.1822236209636,0.308033580176089,1.06461206063404,4.34966496037536,4.26245703939016,0,0,0,0,0.767693373934002,1.28381696410176,2.22742273548156,0.78494864019923,0.539617372749944,0,0,2.22400729730648,0,0.421258456238981,0.48763373908959,0.974853958525138,0,0.409499734223957,1.27264888758341,1.13008116620243,2.75682671773062,1.32687795048244,2.19225442626881,1.15755106853338,0,2.02910376962704,0.30982349809975,0.845086807596724,0.143411352204052,0.196498082026242,1.07001315444375,0.354761064070598,2.53329162357197,0.329294892959902,0,0,0,0.670302275535787,0,1.31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| ||
|short_description=p1@RASA4 | |||
}} | }} |
Latest revision as of 19:05, 24 September 2015
Short description: | p1@RASA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASA4_5end |
Coexpression cluster: | NA |
Association with transcript: | -247bp_to_AK315928_5end |
EntrezGene: | RASA4 |
HGNC: | 23181 |
UniProt: | B7Z9G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.73e-09 | 48 |
phagocyte | 1.73e-09 | 48 |
classical monocyte | 9.02e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.02e-09 | 42 |
macrophage dendritic cell progenitor | 9.88e-08 | 61 |
monopoietic cell | 1.08e-07 | 59 |
monocyte | 1.08e-07 | 59 |
monoblast | 1.08e-07 | 59 |
promonocyte | 1.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-15 | 114 |
regional part of cerebral cortex | 5.44e-12 | 22 |
cerebral hemisphere | 3.94e-11 | 32 |
telencephalon | 5.81e-11 | 34 |
neural tube | 1.72e-10 | 56 |
neural rod | 1.72e-10 | 56 |
future spinal cord | 1.72e-10 | 56 |
neural keel | 1.72e-10 | 56 |
regional part of forebrain | 2.77e-10 | 41 |
forebrain | 2.77e-10 | 41 |
anterior neural tube | 2.77e-10 | 41 |
future forebrain | 2.77e-10 | 41 |
neocortex | 3.24e-10 | 20 |
regional part of telencephalon | 3.80e-10 | 32 |
cerebral cortex | 7.59e-10 | 25 |
pallium | 7.59e-10 | 25 |
regional part of nervous system | 1.24e-09 | 53 |
regional part of brain | 1.24e-09 | 53 |
brain grey matter | 3.87e-09 | 34 |
gray matter | 3.87e-09 | 34 |
neural plate | 2.86e-08 | 82 |
presumptive neural plate | 2.86e-08 | 82 |
neurectoderm | 5.44e-08 | 86 |
musculoskeletal system | 1.10e-07 | 167 |
structure with developmental contribution from neural crest | 6.93e-07 | 132 |