FFCP PHASE1:Hg19::chr3:130569429..130569479,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:130569429..130569479,+
|short_description=p4@ATP2C1
|description=CAGE_peak_4_at_ATP2C1_5end
|association_with_transcript=0bp_to_ENST00000393221,ENST0000050...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27032 | |EntrezGene=27032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |HGNC=13211 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAH8,E7ERC6 | |UniProt=G3XAH8,E7ERC6 | ||
|association_with_transcript=0bp_to_ENST00000393221,ENST00000504381,ENST00000505330,ENST00000507488,uc011blg.1,uc011blh.1,uc011bli.1_5end | |||
|cluster_id=chr3:130569429..130569479,+ | |||
|coexpression_cluster_id=C4283 | |||
|description=CAGE_peak_4_at_ATP2C1_5end | |||
|id=chr3:130569429..130569479,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.28e-22!112;CL:0000049!1.28e-22!112;CL:0000037!1.67e-21!172;CL:0000566!1.67e-21!172;CL:0002032!2.07e-20!165;CL:0000837!2.07e-20!165;CL:0000988!3.42e-20!182;CL:0000766!3.30e-14!76;CL:0000738!3.63e-14!140;CL:0000557!4.96e-14!71;CL:0000839!1.69e-13!70;CL:0002057!7.08e-13!42;CL:0002031!1.71e-12!124;CL:0002009!6.33e-12!65;CL:0000860!2.84e-11!45;CL:0002194!5.10e-11!63;CL:0000576!5.10e-11!63;CL:0000040!5.10e-11!63;CL:0000559!5.10e-11!63;CL:0002087!3.52e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-13;33!CL:0002057;1.16e-13;33!CL:0000473;1.70e-13;39!CL:0000234;1.70e-13;39!CL:0000763;2.06e-08;100!CL:0000766;3.22e-08;69!CL:0000576;8.54e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.77e-26,108;CL:0000049,2.77e-26,108;CL:0000037,3.50e-22,168;CL:0000988,5.47e-22,177;CL:0002032,9.41e-21,161;CL:0000837,9.41e-21,161;CL:0000557,4.01e-16,67;CL:0000766,5.63e-16,72;CL:0000473,8.12e-16,48;CL:0000234,8.12e-16,48;CL:0000839,1.82e-15,66;CL:0000738,1.12e-13,136;CL:0002009,1.57e-13,61;CL:0000860,4.44e-13,42;CL:0002057,4.44e-13,42;CL:0002194,2.04e-12,59;CL:0000576,2.04e-12,59;CL:0000040,2.04e-12,59;CL:0000559,2.04e-12,59;CL:0002031,4.65e-12,120;CL:0002087,2.76e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-10;42!CL:0000049;1.06e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.06e-07!51;DOID:0060083!2.06e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.35e-08,51;DOID:0060083,7.35e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.86e-27!115;UBERON:0002390!4.70e-18!102;UBERON:0003061!4.70e-18!102;UBERON:0002193!5.11e-14!112;UBERON:0001049!1.09e-11!57;UBERON:0005068!1.09e-11!57;UBERON:0006241!1.09e-11!57;UBERON:0007135!1.09e-11!57;UBERON:0002371!1.46e-11!80;UBERON:0003080!6.03e-10!42;UBERON:0002780!9.88e-10!41;UBERON:0001890!9.88e-10!41;UBERON:0006240!9.88e-10!41;UBERON:0001474!3.71e-09!86;UBERON:0001893!5.09e-09!34;UBERON:0002020!6.76e-09!34;UBERON:0003528!6.76e-09!34;UBERON:0000178!6.94e-09!15;UBERON:0000179!6.94e-09!15;UBERON:0000463!6.94e-09!15;UBERON:0002616!7.94e-09!59;UBERON:0000955!9.31e-09!69;UBERON:0006238!9.31e-09!69;UBERON:0001869!9.76e-09!32;UBERON:0002791!1.25e-08!33;UBERON:0005743!1.52e-08!86;UBERON:0001017!6.14e-08!82;UBERON:0002619!1.23e-07!22;UBERON:0004765!2.90e-07!101;UBERON:0001434!2.90e-07!101;UBERON:0003075!3.22e-07!86;UBERON:0007284!3.22e-07!86;UBERON:0001950!7.51e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-10;15!UBERON:0000179;1.41e-10;15!UBERON:0000463;1.41e-10;15!UBERON:0001893;6.14e-08;34!UBERON:0007023;1.10e-07;114!UBERON:0001869;1.22e-07;32!UBERON:0002619;1.25e-07;22!UBERON:0003528;1.29e-07;34!UBERON:0002020;1.29e-07;34!UBERON:0002791;2.22e-07;32!UBERON:0002780;3.28e-07;41!UBERON:0001890;3.28e-07;41!UBERON:0000073;4.23e-07;53!UBERON:0002616;4.23e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.04e-26,114;UBERON:0002390,5.02e-22,98;UBERON:0003061,5.02e-22,98;UBERON:0002193,3.39e-18,108;UBERON:0002371,4.21e-14,76;UBERON:0001474,8.73e-12,82;UBERON:0004765,1.46e-11,90;UBERON:0000073,2.29e-11,53;UBERON:0002616,2.29e-11,53;UBERON:0002405,3.03e-11,93;UBERON:0001049,5.91e-11,56;UBERON:0005068,5.91e-11,56;UBERON:0006241,5.91e-11,56;UBERON:0007135,5.91e-11,56;UBERON:0000178,1.24e-10,15;UBERON:0000179,1.24e-10,15;UBERON:0000463,1.24e-10,15;UBERON:0000955,8.27e-10,68;UBERON:0006238,8.27e-10,68;UBERON:0002780,1.26e-09,41;UBERON:0001890,1.26e-09,41;UBERON:0003080,1.26e-09,41;UBERON:0006240,1.26e-09,41;UBERON:0001434,3.17e-09,100;UBERON:0001893,6.72e-09,34;UBERON:0003528,9.18e-09,34;UBERON:0002020,9.18e-09,34;UBERON:0001869,1.55e-08,32;UBERON:0002791,3.51e-08,32;UBERON:0001017,9.12e-08,81;UBERON:0002619,1.04e-07,22;UBERON:0010371,8.94e-07,104;UBERON:0001950,8.99e-07,20 | |||
|phase1_expression=1.45342703416445,0.856402095563933,3.52386010239928,0,3.12872766099101,2.61701557230111,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,4.03395087871065,2.41077811209591,1.46062018077475,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0,0.376627918784408,25.5984909255637,22.4955615092851,23.4558128314764,5.90046415273356,5.37361157336098,6.65709330259127,0.919421224478927,0,0,0.697204805222715,11.800046296456,34.644851841512,21.0518255242113,24.065333696417,15.6247826915413,2.01523926815932,0.32389366601898,2.06060454107349,1.01778767145695,1.88937971844405,2.66842467306598,12.3187389560013,13.5685403047203,38.4035899909928,8.05538698502021,5.89169625016932,14.8983804829809,33.7850767121886,42.6019891165325,65.004713565284,2.25890807451126,4.36649840092553,13.0339620978149,20.8137046812214,22.7859609224026,25.5734850319616,0.989553900560148,1.39624560335142,2.13112375266347,51.3670352372594,42.5538918518355,67.2648028915221,2.26123798731069,3.65038042894141,10.2078757011405,40.5617666764357,88.7549102730031,109.812448441987,0.211255286311942,1.06302149982522,0.838634582033504,0.22465726229299,0.450530678524519,0.16072558669708,0,0,0,0,1.63841583378639,0,0.853460445133014,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,163.892447437992,111.541204033326,24.2313357993071,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0.779873198196215,0,0.664601683750863,0.541607727530031,0.384273959177026,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,4.6497571801688,0,0,0,0.696518949197069,3.32394901297163,1.90792499444274,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,5.27121669744253,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,13.7215205745941,9.00062197949754,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,9.98727597218493,1.1240175325762,1.60846355858609,0.555530670951178,0,0,0,0,0.117408694235822,0,0,0,0,0,4.18568910348575,17.3163156203036,6.39113997841531,13.1227367581488,27.0451226400164,11.9091081683605,0.985143749731331,1.45316969256981,2.30029607499127,4.92663237895944,2.28925928434388,15.7569367810987,9.07955706526857,9.21569764012574,0,0,0,0,0.205654985406647,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,4.35766729300147,0.899756920638513,2.43247561282381,6.52934218861764,10.5416969741516,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.513372145118994,0.76228387266739,2.60279707715243,0,0.502548796003046,0,0.749007023947182,2.99161459204025,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.86091223510599,3.66714141391649,3.09509917629989,0,0,0,1.73675465473144,3.06923946576125,0.561320188866147,0.640695746278505,1.53512174720011,1.12597744800525,0,0,0.355123450626254,0,0,0,0,10.6268429260741,0.0920809889358963,0,0,0,1.35359883872224,2.69553679865452,0.784349769176855,0,0.949964660035881,0,0,0,0,0,0,0.254876273045038,0,0,6.13927654608617,7.32019262869721,0.512900250232778,0.656029291399411,8.13445986660758,3.29731237272711,0,0,5.16838984196555,1.95018073810956,0,0,0,0,0.413509717453592,0.107420244868274,0,0.340906509664404,3.20515328328254,6.11554186835619,1.92190067365106,6.38063562472921,0.708104465988849,0,0,0,0,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.811641507850816,0,0,0,0,0.7133421029625,0,0,0.329294892959902,0,0,0.48111056362756,0,1.08890984861323,3.67160823029439,1.29151611801369,3.36942951335251,0,2.98640420269047,12.1787426215721,17.5866557642746,9.1143549947866,7.62341681464925,9.46133228098247,19.4541993357815,14.5808488054291,16.6556287021797,0,0,0.735120647943095,0.185803175125719,0,0.142283686696828,1.11598390910176,5.9873811429845,33.3219344030318,42.5463901275005,6.49243880549111,20.217396824169,0.228234679033192,1.56679895773023,10.0253790836027,7.78742177887375,0.1605880751037,0,0,3.77855879231341,0,0,0.333698283423817,1.9538809540204,18.0964013031908,0,23.2591883489345,46.297003551697,1.4098700508785,0,4.9812780952444,0,49.146532466368,0,0.23874448473769,0,0,10.9356241254293,5.90811548924153,0.222617410045812,0.16480387422676,0,1.19548792950642,1.38141957765574,0,1.22722419002586,29.0480140888124,0.622079175323615,1.61763032065188,0.179021174675609,0,0.295930216910801,14.3689855408164,0,7.75466196876175,5.28778159522552,0,0,0,2.89999830173917,0.910347586283997,0,0.472775363535873,3.10269035917318,0,0,4.42870692906919,4.34147179051469,9.15490417902499,6.41359707601103,7.38869047383869,5.48463492884931,0,0.697118721393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|phase1_expression=1.45342703416445,0.856402095563933,3.52386010239928,0,3.12872766099101,2.61701557230111,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,4.03395087871065,2.41077811209591,1.46062018077475,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0,0.376627918784408,25.5984909255637,22.4955615092851,23.4558128314764,5.90046415273356,5.37361157336098,6.65709330259127,0.919421224478927,0,0,0.697204805222715,11.800046296456,34.644851841512,21.0518255242113,24.065333696417,15.6247826915413,2.01523926815932,0.32389366601898,2.06060454107349,1.01778767145695,1.88937971844405,2.66842467306598,12.3187389560013,13.5685403047203,38.4035899909928,8.05538698502021,5.89169625016932,14.8983804829809,33.7850767121886,42.6019891165325,65.004713565284,2.25890807451126,4.36649840092553,13.0339620978149,20.8137046812214,22.7859609224026,25.5734850319616,0.989553900560148,1.39624560335142,2.13112375266347,51.3670352372594,42.5538918518355,67.2648028915221,2.26123798731069,3.65038042894141,10.2078757011405,40.5617666764357,88.7549102730031,109.812448441987,0.211255286311942,1.06302149982522,0.838634582033504,0.22465726229299,0.450530678524519,0.16072558669708,0,0,0,0,1.63841583378639,0,0.853460445133014,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,163.892447437992,111.541204033326,24.2313357993071,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0.779873198196215,0,0.664601683750863,0.541607727530031,0.384273959177026,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,4.6497571801688,0,0,0,0.696518949197069,3.32394901297163,1.90792499444274,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,5.27121669744253,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,13.7215205745941,9.00062197949754,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,9.98727597218493,1.1240175325762,1.60846355858609,0.555530670951178,0,0,0,0,0.117408694235822,0,0,0,0,0,4.18568910348575,17.3163156203036,6.39113997841531,13.1227367581488,27.0451226400164,11.9091081683605,0.985143749731331,1.45316969256981,2.30029607499127,4.92663237895944,2.28925928434388,15.7569367810987,9.07955706526857,9.21569764012574,0,0,0,0,0.205654985406647,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,4.35766729300147,0.899756920638513,2.43247561282381,6.52934218861764,10.5416969741516,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.513372145118994,0.76228387266739,2.60279707715243,0,0.502548796003046,0,0.749007023947182,2.99161459204025,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.86091223510599,3.66714141391649,3.09509917629989,0,0,0,1.73675465473144,3.06923946576125,0.561320188866147,0.640695746278505,1.53512174720011,1.12597744800525,0,0,0.355123450626254,0,0,0,0,10.6268429260741,0.0920809889358963,0,0,0,1.35359883872224,2.69553679865452,0.784349769176855,0,0.949964660035881,0,0,0,0,0,0,0.254876273045038,0,0,6.13927654608617,7.32019262869721,0.512900250232778,0.656029291399411,8.13445986660758,3.29731237272711,0,0,5.16838984196555,1.95018073810956,0,0,0,0,0.413509717453592,0.107420244868274,0,0.340906509664404,3.20515328328254,6.11554186835619,1.92190067365106,6.38063562472921,0.708104465988849,0,0,0,0,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.811641507850816,0,0,0,0,0.7133421029625,0,0,0.329294892959902,0,0,0.48111056362756,0,1.08890984861323,3.67160823029439,1.29151611801369,3.36942951335251,0,2.98640420269047,12.1787426215721,17.5866557642746,9.1143549947866,7.62341681464925,9.46133228098247,19.4541993357815,14.5808488054291,16.6556287021797,0,0,0.735120647943095,0.185803175125719,0,0.142283686696828,1.11598390910176,5.9873811429845,33.3219344030318,42.5463901275005,6.49243880549111,20.217396824169,0.228234679033192,1.56679895773023,10.0253790836027,7.78742177887375,0.1605880751037,0,0,3.77855879231341,0,0,0.333698283423817,1.9538809540204,18.0964013031908,0,23.2591883489345,46.297003551697,1.4098700508785,0,4.9812780952444,0,49.146532466368,0,0.23874448473769,0,0,10.9356241254293,5.90811548924153,0.222617410045812,0.16480387422676,0,1.19548792950642,1.38141957765574,0,1.22722419002586,29.0480140888124,0.622079175323615,1.61763032065188,0.179021174675609,0,0.295930216910801,14.3689855408164,0,7.75466196876175,5.28778159522552,0,0,0,2.89999830173917,0.910347586283997,0,0.472775363535873,3.10269035917318,0,0,4.42870692906919,4.34147179051469,9.15490417902499,6.41359707601103,7.38869047383869,5.48463492884931,0,0.697118721393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| ||
|short_description=p4@ATP2C1 | |||
}} | }} |
Latest revision as of 19:01, 24 September 2015
Short description: | p4@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP2C1_5end |
Coexpression cluster: | C4283_CD34_CD14_colon_adult_cord_acute_heart |
Association with transcript: | 0bp_to_ENST00000393221, ENST00000504381, ENST00000505330, ENST00000507488, uc011blg.1, uc011blh.1, uc011bli.1_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | G3XAH8E7ERC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.77e-26 | 108 |
common myeloid progenitor | 2.77e-26 | 108 |
hematopoietic stem cell | 3.50e-22 | 168 |
hematopoietic cell | 5.47e-22 | 177 |
hematopoietic oligopotent progenitor cell | 9.41e-21 | 161 |
hematopoietic multipotent progenitor cell | 9.41e-21 | 161 |
granulocyte monocyte progenitor cell | 4.01e-16 | 67 |
myeloid leukocyte | 5.63e-16 | 72 |
defensive cell | 8.12e-16 | 48 |
phagocyte | 8.12e-16 | 48 |
myeloid lineage restricted progenitor cell | 1.82e-15 | 66 |
leukocyte | 1.12e-13 | 136 |
macrophage dendritic cell progenitor | 1.57e-13 | 61 |
classical monocyte | 4.44e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.44e-13 | 42 |
monopoietic cell | 2.04e-12 | 59 |
monocyte | 2.04e-12 | 59 |
monoblast | 2.04e-12 | 59 |
promonocyte | 2.04e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 4.65e-12 | 120 |
nongranular leukocyte | 2.76e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.04e-26 | 114 |
hematopoietic system | 5.02e-22 | 98 |
blood island | 5.02e-22 | 98 |
hemolymphoid system | 3.39e-18 | 108 |
bone marrow | 4.21e-14 | 76 |
bone element | 8.73e-12 | 82 |
skeletal element | 1.46e-11 | 90 |
regional part of nervous system | 2.29e-11 | 53 |
regional part of brain | 2.29e-11 | 53 |
immune system | 3.03e-11 | 93 |
neural tube | 5.91e-11 | 56 |
neural rod | 5.91e-11 | 56 |
future spinal cord | 5.91e-11 | 56 |
neural keel | 5.91e-11 | 56 |
blood | 1.24e-10 | 15 |
haemolymphatic fluid | 1.24e-10 | 15 |
organism substance | 1.24e-10 | 15 |
brain | 8.27e-10 | 68 |
future brain | 8.27e-10 | 68 |
regional part of forebrain | 1.26e-09 | 41 |
forebrain | 1.26e-09 | 41 |
anterior neural tube | 1.26e-09 | 41 |
future forebrain | 1.26e-09 | 41 |
skeletal system | 3.17e-09 | 100 |
telencephalon | 6.72e-09 | 34 |
brain grey matter | 9.18e-09 | 34 |
gray matter | 9.18e-09 | 34 |
cerebral hemisphere | 1.55e-08 | 32 |
regional part of telencephalon | 3.51e-08 | 32 |
central nervous system | 9.12e-08 | 81 |
regional part of cerebral cortex | 1.04e-07 | 22 |
ecto-epithelium | 8.94e-07 | 104 |
neocortex | 8.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.35e-08 | 51 |
immune system cancer | 7.35e-08 | 51 |