FFCP PHASE1:Hg19::chr3:130569415..130569428,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:130569415..130569428,+ to FFCP PHASE1:Hg19::chr3:130569415..130569428,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27032 | |EntrezGene=27032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |HGNC=13211 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERC6 | |UniProt=E7ERC6 | ||
|association_with_transcript=-10bp_to_ENST00000504381,ENST00000505330_5end | |||
|cluster_id=chr3:130569415..130569428,+ | |||
|coexpression_cluster_id=C4283 | |||
|description=CAGE_peak_12_at_ATP2C1_5end | |||
|id=chr3:130569415..130569428,+ | |||
|ontology_enrichment_celltype=CL:0000763!6.55e-18!112;CL:0000049!6.55e-18!112;CL:0000988!9.15e-18!182;CL:0000037!1.61e-17!172;CL:0000566!1.61e-17!172;CL:0002032!3.35e-17!165;CL:0000837!3.35e-17!165;CL:0002057!1.19e-09!42;CL:0002031!2.45e-09!124;CL:0000839!3.56e-09!70;CL:0000766!7.86e-09!76;CL:0000738!9.19e-09!140;CL:0000860!1.68e-08!45;CL:0000557!3.99e-08!71;CL:0002087!4.04e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.02e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.62e-16,177;CL:0000037,1.44e-13,168;CL:0002032,2.44e-13,161;CL:0000837,2.44e-13,161;CL:0002031,5.22e-08,120;CL:0000945,8.28e-08,24;CL:0000826,8.28e-08,24;CL:0000763,2.10e-07,108;CL:0000049,2.10e-07,108;CL:0000838,5.97e-07,52;CL:0000542,8.97e-07,53;CL:0000051,8.97e-07,53;CL:0002087,9.33e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.46e-10!51;DOID:0060083!1.46e-10!51;DOID:1240!3.83e-09!39;DOID:8692!5.05e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.28e-10;51!DOID:0060083;2.28e-10;51!DOID:1240;1.05e-09;39!DOID:8692;2.40e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.63e-15,51;DOID:0060083,3.63e-15,51;DOID:1240,3.82e-12,39;DOID:8692,4.23e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-27!115;UBERON:0001049!8.93e-15!57;UBERON:0005068!8.93e-15!57;UBERON:0006241!8.93e-15!57;UBERON:0007135!8.93e-15!57;UBERON:0002390!2.02e-14!102;UBERON:0003061!2.02e-14!102;UBERON:0001869!9.53e-14!32;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0001893!1.95e-13!34;UBERON:0002780!2.61e-13!41;UBERON:0001890!2.61e-13!41;UBERON:0006240!2.61e-13!41;UBERON:0000955!6.69e-13!69;UBERON:0006238!6.69e-13!69;UBERON:0003080!8.83e-13!42;UBERON:0002791!1.04e-12!33;UBERON:0002619!2.78e-12!22;UBERON:0002193!2.93e-12!112;UBERON:0002616!5.03e-12!59;UBERON:0005743!7.95e-12!86;UBERON:0001017!1.05e-11!82;UBERON:0001950!1.05e-10!20;UBERON:0003075!1.99e-10!86;UBERON:0007284!1.99e-10!86;UBERON:0000178!3.42e-10!15;UBERON:0000179!3.42e-10!15;UBERON:0000463!3.42e-10!15;UBERON:0000956!3.68e-10!25;UBERON:0000203!3.68e-10!25;UBERON:0000073!1.67e-09!94;UBERON:0001016!1.67e-09!94;UBERON:0002346!2.00e-09!90;UBERON:0003056!6.41e-08!61;UBERON:0000153!7.46e-08!129;UBERON:0007811!7.46e-08!129;UBERON:0002371!1.44e-07!80;UBERON:0000033!5.81e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-10;15!UBERON:0000179;1.42e-10;15!UBERON:0000463;1.42e-10;15!UBERON:0002390;2.73e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.73e-10,15;UBERON:0000179,1.73e-10,15;UBERON:0000463,1.73e-10,15;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0002193,2.14e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,2.75088260692625,1.9704141467987,1.81034797021462,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0.426507697462265,2.93600439334847,1.66198622559563,0.601633342410425,0.434021741431704,0.671746422719773,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0.28769239232215,0,0.709446689665756,1.72372840368309,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0.426224750532694,1.45104619314292,1.70215567407342,1.24564449799115,0.502497330513487,0,0.434377689410233,0,1.10483290796269,2.84816148696796,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,11.8954195721123,8.40762844472304,3.423993102076,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0.503946384596579,0.425325291727159,0,0,0,0,0.528290604079356,1.65862492432618,0.576479813667846,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.476463550915578,1.23408681925858,0.648473311192717,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0.59873811429845,3.63860203251497,3.81012448902989,0.649243880549111,1.12318871245384,0,0,2.50634477090067,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0.390776190804081,1.67043704337145,2.46174797895425,1.35227839237992,2.99764771198038,0,0,0,0,4.56917875537661,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,3.07712013652674,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,1.18219047581419,0.219385397153973,0,0,0,0.455768223388005,0,0,0,0,0,0,3.06579894587209,1.56980256395025,0.997270091400938,0,0.19606253431774,0.167821586975843,0.189753732724185,1.74830236878417,0,0,0,10.1702660678783,0,0,0,6.22694370229306,5.43681331364613,5.63878527329459,0.067401132980677,1.60515529459758,0.702793337176017,0,0.19566461893209,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.90392296312213,0,0,0.949661939338181,0,0.64127056201227,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0.600420288709789,0,0,0,3.6804229599104,1.95497680890578,2.97908551215189,0,0.798716001995964,5.57993862577542,3.79391477651183,0.268733889946905,0,0,0,0,0,0,0.846733320657845,0.795229689809303,0.953423842781029,0,0,0,0.449947783103001,0,0.850493793212345,0,0.157611414598396,0.0524545881349981,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0.574647645245373,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0.213574825135389,0,0,0,0.197611631897944,2.31405936923702,0,0,0.2506898940227,0,0,0,0.886068179966986,0.976210119215705,0.3755727921195,0,0.443716206147409,0.310482014706917,0,0.249960815924213,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0.300515217994437,0,0,0.545545977607678,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.194860308839388,0,0,0,0,0,1.19992437512958,0.853533837553127,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0.319267718114302,1.64093091392604,0,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.810451015420736,0.781078098613847,0.826747186004736,0.443910671357348,0,0,0,0,0.638812138197976,0,0,0,1.59363533945908,0,1.38280785066935,0.342976018874837,0.339848664884159,0.986591603442736,0,0,0.156986185701028,0.785577949580009,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,1.64260490969995,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0,0.257831551894309,1.09935271517422,0,0,0,0,0,0,0,0.747906392100062,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,1.07185652062471,0.829169439458779,0,0.639701945702943,0.714193294391221,0.193766729508018,0.1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| ||
|short_description=p12@ATP2C1 | |||
}} | }} |
Latest revision as of 19:01, 24 September 2015
Short description: | p12@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ATP2C1_5end |
Coexpression cluster: | C4283_CD34_CD14_colon_adult_cord_acute_heart |
Association with transcript: | -10bp_to_ENST00000504381, ENST00000505330_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | E7ERC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.62e-16 | 177 |
hematopoietic stem cell | 1.44e-13 | 168 |
hematopoietic oligopotent progenitor cell | 2.44e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 5.22e-08 | 120 |
lymphocyte of B lineage | 8.28e-08 | 24 |
pro-B cell | 8.28e-08 | 24 |
myeloid cell | 2.10e-07 | 108 |
common myeloid progenitor | 2.10e-07 | 108 |
lymphoid lineage restricted progenitor cell | 5.97e-07 | 52 |
lymphocyte | 8.97e-07 | 53 |
common lymphoid progenitor | 8.97e-07 | 53 |
nongranular leukocyte | 9.33e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 1.73e-10 | 15 |
haemolymphatic fluid | 1.73e-10 | 15 |
organism substance | 1.73e-10 | 15 |
hematopoietic system | 1.36e-08 | 98 |
blood island | 1.36e-08 | 98 |
hemolymphoid system | 2.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.63e-15 | 51 |
immune system cancer | 3.63e-15 | 51 |
leukemia | 3.82e-12 | 39 |
myeloid leukemia | 4.23e-09 | 31 |