FFCP PHASE1:Hg19::chr14:58798013..58798071,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:58798013..58798071,+ to FFCP PHASE1:Hg19::chr14:58798013..58798071,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5926 | |EntrezGene=5926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9885 | |HGNC=9885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000417477_5end | |||
|cluster_id=chr14:58798013..58798071,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_ARID4A_5end | |||
|id=chr14:58798013..58798071,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.12e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.92e-23;82!UBERON:0006215;7.43e-10;3!UBERON:0006241;1.79e-08;3!UBERON:0003057;1.79e-08;3 | |||
|ontology_enrichment_disease=DOID:171!1.24e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.39e-11;10!DOID:169;9.93e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.19e-11,10;DOID:169,9.70e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.50e-53!82;UBERON:0001049!3.23e-52!57;UBERON:0005068!3.23e-52!57;UBERON:0006241!3.23e-52!57;UBERON:0007135!3.23e-52!57;UBERON:0000073!1.02e-51!94;UBERON:0001016!1.02e-51!94;UBERON:0005743!1.72e-51!86;UBERON:0000955!4.69e-46!69;UBERON:0006238!4.69e-46!69;UBERON:0002616!9.46e-45!59;UBERON:0002346!7.95e-43!90;UBERON:0002780!1.88e-41!41;UBERON:0001890!1.88e-41!41;UBERON:0006240!1.88e-41!41;UBERON:0003080!4.53e-40!42;UBERON:0003075!1.87e-39!86;UBERON:0007284!1.87e-39!86;UBERON:0002020!3.89e-34!34;UBERON:0003528!3.89e-34!34;UBERON:0001893!3.89e-34!34;UBERON:0002791!4.37e-33!33;UBERON:0001869!2.66e-32!32;UBERON:0003056!1.21e-30!61;UBERON:0007023!6.92e-30!115;UBERON:0000924!2.20e-28!173;UBERON:0006601!2.20e-28!173;UBERON:0000153!1.28e-27!129;UBERON:0007811!1.28e-27!129;UBERON:0000033!1.17e-26!123;UBERON:0004121!8.01e-26!169;UBERON:0000956!3.06e-25!25;UBERON:0000203!3.06e-25!25;UBERON:0002619!1.04e-23!22;UBERON:0001950!1.49e-21!20;UBERON:0003076!7.00e-13!15;UBERON:0003057!7.00e-13!15;UBERON:0002420!1.22e-10!9;UBERON:0007245!1.22e-10!9;UBERON:0010009!1.22e-10!9;UBERON:0010011!1.22e-10!9;UBERON:0000454!1.22e-10!9;UBERON:0002308!2.92e-10!9;UBERON:0000125!2.92e-10!9;UBERON:0004733!4.65e-10!12;UBERON:0002028!4.65e-10!12;UBERON:0007277!4.65e-10!12;UBERON:0004732!5.13e-09!13;UBERON:0000025!5.42e-09!194;UBERON:0001894!1.27e-08!7;UBERON:0006222!1.27e-08!7;UBERON:0009663!2.26e-08!7;UBERON:0000200!4.82e-08!6;UBERON:0001871!5.98e-08!7;UBERON:0002680!1.51e-07!9;UBERON:0001895!1.51e-07!9;UBERON:0010092!1.51e-07!9;UBERON:0000349!4.95e-07!5;UBERON:0001872!7.88e-07!5;UBERON:0002021!8.15e-07!5;UBERON:0002298!9.46e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.21e-61;41!UBERON:0001890;2.21e-61;41!UBERON:0001893;1.58e-58;34!UBERON:0003528;3.62e-58;34!UBERON:0002020;3.62e-58;34!UBERON:0001869;1.10e-57;32!UBERON:0002791;1.87e-57;32!UBERON:0000073;1.38e-55;53!UBERON:0002616;1.38e-55;53!UBERON:0002619;3.37e-55;22!UBERON:0001950;4.97e-50;20!UBERON:0000956;4.59e-48;25!UBERON:0000203;4.59e-48;25!UBERON:0001017;5.27e-37;75!UBERON:0001016;5.15e-36;83!UBERON:0000955;8.62e-36;68!UBERON:0002420;3.36e-23;9!UBERON:0007245;3.36e-23;9!UBERON:0010009;3.36e-23;9!UBERON:0010011;3.36e-23;9!UBERON:0000454;3.36e-23;9!UBERON:0000125;3.07e-22;9!UBERON:0002308;3.07e-22;9!UBERON:0001894;2.86e-18;7!UBERON:0009663;8.41e-18;7!UBERON:0000200;5.52e-17;6!UBERON:0001871;7.91e-15;6!UBERON:0000349;1.37e-14;5!UBERON:0001872;4.00e-14;5!UBERON:0007023;4.10e-14;114!UBERON:0002021;5.11e-14;5!UBERON:0004733;1.69e-13;12!UBERON:0002028;1.69e-13;12!UBERON:0011216;4.43e-13;132!UBERON:0004732;2.40e-12;13!UBERON:0003296;2.47e-11;4!UBERON:0010133;2.47e-11;4!UBERON:0000369;2.86e-11;4!UBERON:0002435;2.86e-11;4!UBERON:0000204;2.86e-11;4!UBERON:0002784;4.74e-11;4!UBERON:0002680;6.56e-11;9!UBERON:0001895;6.56e-11;9!UBERON:0002298;1.06e-10;6!UBERON:0001870;1.02e-09;3!UBERON:0005383;7.26e-09;3!UBERON:0005382;7.26e-09;3!UBERON:0000988;1.22e-08;3!UBERON:0002240;1.79e-08;3!UBERON:0005174;1.79e-08;3!UBERON:0001137;1.79e-08;3!UBERON:0002050;6.43e-08;5!UBERON:0005423;6.43e-08;5!UBERON:0010314;1.16e-07;132!UBERON:0004121;1.43e-07;165!UBERON:0002771;3.65e-07;2!UBERON:0001876;4.10e-07;2!UBERON:0002702;6.12e-07;2!UBERON:0001954;9.62e-07;2!UBERON:0003022;9.62e-07;2!UBERON:0002421;9.62e-07;2!UBERON:0002600;9.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.81e-105,56;UBERON:0005068,1.81e-105,56;UBERON:0006241,1.81e-105,56;UBERON:0007135,1.81e-105,56;UBERON:0001017,1.37e-99,81;UBERON:0001016,2.41e-98,89;UBERON:0000073,3.51e-98,53;UBERON:0002616,3.51e-98,53;UBERON:0002780,1.91e-86,41;UBERON:0001890,1.91e-86,41;UBERON:0003080,1.91e-86,41;UBERON:0006240,1.91e-86,41;UBERON:0000955,2.20e-83,68;UBERON:0006238,2.20e-83,68;UBERON:0002346,5.13e-73,86;UBERON:0003528,4.37e-69,34;UBERON:0002020,4.37e-69,34;UBERON:0001893,4.37e-69,34;UBERON:0003075,3.09e-68,82;UBERON:0007284,3.09e-68,82;UBERON:0001869,1.04e-64,32;UBERON:0002791,1.99e-64,32;UBERON:0002619,3.61e-55,22;UBERON:0003056,5.33e-55,61;UBERON:0010371,3.79e-51,104;UBERON:0004121,3.93e-50,171;UBERON:0000924,3.93e-50,171;UBERON:0006601,3.93e-50,171;UBERON:0001950,5.32e-50,20;UBERON:0000956,4.88e-48,25;UBERON:0000203,4.88e-48,25;UBERON:0007023,2.00e-43,114;UBERON:0010314,1.37e-39,132;UBERON:0011216,1.37e-36,223;UBERON:0000025,3.33e-24,192;UBERON:0002420,4.16e-23,9;UBERON:0007245,4.16e-23,9;UBERON:0010009,4.16e-23,9;UBERON:0010011,4.16e-23,9;UBERON:0000454,4.16e-23,9;UBERON:0000125,3.32e-22,9;UBERON:0002308,3.32e-22,9;UBERON:0003076,9.49e-20,15;UBERON:0003057,9.49e-20,15;UBERON:0001894,2.57e-18,7;UBERON:0006222,2.57e-18,7;UBERON:0009663,1.01e-17,7;UBERON:0000200,6.08e-17,6;UBERON:0004111,8.83e-17,240;UBERON:0001871,7.46e-15,6;UBERON:0000349,1.49e-14,5;UBERON:0001872,4.47e-14,5;UBERON:0002021,4.85e-14,5;UBERON:0004733,1.51e-13,12;UBERON:0002028,1.51e-13,12;UBERON:0007277,1.51e-13,12;UBERON:0004732,2.17e-12,13;UBERON:0003296,2.31e-11,4;UBERON:0010133,2.31e-11,4;UBERON:0000369,3.10e-11,4;UBERON:0002435,3.10e-11,4;UBERON:0000204,3.10e-11,4;UBERON:0010082,3.10e-11,4;UBERON:0002784,4.05e-11,4;UBERON:0002680,6.06e-11,9;UBERON:0001895,6.06e-11,9;UBERON:0010092,6.06e-11,9;UBERON:0002298,9.24e-11,6;UBERON:0000483,1.81e-10,306;UBERON:0000119,2.99e-10,309;UBERON:0001870,1.08e-09,3;UBERON:0005383,7.46e-09,3;UBERON:0005382,7.46e-09,3;UBERON:0000988,1.08e-08,3;UBERON:0002240,1.75e-08,3;UBERON:0005174,1.75e-08,3;UBERON:0001137,1.75e-08,3;UBERON:0002050,2.26e-08,564;UBERON:0000923,5.46e-08,560;UBERON:0010316,5.46e-08,560;UBERON:0005291,5.46e-08,560;UBERON:0006598,5.46e-08,560;UBERON:0010317,5.46e-08,560;UBERON:0002532,5.46e-08,560;UBERON:0005423,1.18e-07,581;UBERON:0000922,3.26e-07,592;UBERON:0002771,3.54e-07,2;UBERON:0001876,4.22e-07,2;UBERON:0002702,6.48e-07,2;UBERON:0001954,9.62e-07,2;UBERON:0003022,9.62e-07,2;UBERON:0002421,9.62e-07,2;UBERON:0002600,9.62e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0.328875809207352,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.20964045934839,0,0.434473211648397,0,0,0,0,0,0,0,0,0.567208902984407,0.665188192387692,0.263504357079378,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0.414656231081544,1.72943944100354,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.7333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0.256686072559497,5.84417635711666,19.5209780786433,6.95959931499926,13.7363337574166,8.93114252314428,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.142283686696828,1.27541018183058,0.199579371432817,0.383010740264733,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,25.8478388419237,14.2076110574618,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0.394573622547734,0,0,0.969332746095218,12.3381570555262,3.99227596002388,0.260427761085233,0,0,0.1137934482855,0,0,0,0.291604613383254,4.34062487333231,4.42870692906919,7.11518987889907,24.4130778107333,37.3757898567539,12.412999996049,8.33664509185096,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0.208843899010911,2.22423738836234,0,5.62234669740814,0.182454789215666,0,0,0,0,15.609710843155,0.63186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,23.4249945036751,0,0,0.213452994739353,0,0,0,0,0,0,0,0.951329442515298,1.35983700206033,0.101998217636322,0,4.20294202096853,3.55953985119182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,11.9284453471395,11.3048827072608,0,0,0,0,0,6.50020256240864,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84422503995411,5.95046707842105,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,12.4049545195378,27.3338833380397,15.3984844768995,0.573409195690071,4.32623300993724,1.55241007353459,0.138348634936231,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.621051827505038,0.414706207840855,0,0,0,0.761610424337591,0.813741466409323,0,0,0,0,0.400027764663154,0,0,0,0,0.643324774124777,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,15.7614617212973,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0.622077260032973,4.73209173823511,2.372145850727,0.157265941855896,1.09209638192014,1.01839517972415,3.40119872162693,1.11542187833102,0,0,0,1.60114149657094,0,0,6.16600560926011,12.7526918693026,7.66242523474326,10.2558182120378,16.8888036468551,2.55881834117606,14.6942837524984,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,6.88883363107625,14.8404838736631,13.434641772577,4.37569090337957,19.1441183156377,0,0,0.527613733078862,0,3.74991285114801,12.7787814443153,6.67662164660295,9.1064876540519,0.0887023701626388,0,0,10.5353086114089,3.15709313101676,0,0,0.470958557103084,8.3271262655481,0,0.913158720509496,0,0,0.500335809236594,0,0.581207126840626,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,3.780064728066,0,0,0,1.35866559210006,0,0.218559560503957,0,0.245148321753905,1.41405928260976,3.53355240806901,5.94092800654172,4.6492130034174,0,0.939839179798536,0,0,0,0,0,0,0,2.43677291357467,0,3.80752345069122,18.3267289942959,0,0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| ||
|short_description=p2@ARID4A | |||
}} | }} |
Latest revision as of 18:51, 24 September 2015
Short description: | p2@ARID4A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARID4A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 8bp_to_ENST00000417477_5end |
EntrezGene: | ARID4A |
HGNC: | 9885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.12e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.19e-11 | 10 |
neuroendocrine tumor | 9.70e-07 | 6 |