FFCP PHASE1:Hg19::chr2:219745219..219745236,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:219745219..219745236,+ to FFCP PHASE1:Hg19::chr2:219745219..219745236,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80326 | |EntrezGene=80326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13829 | |HGNC=13829 | ||
|TSSclassifier=strong | |||
|UniProt=Q53S44,Q9GZT5 | |UniProt=Q53S44,Q9GZT5 | ||
|association_with_transcript=-18bp_to_NM_025216,uc002vjd.1_5end | |||
|cluster_id=chr2:219745219..219745236,+ | |||
|coexpression_cluster_id=C2688 | |||
|description=CAGE_peak_2_at_WNT10A_5end | |||
|id=chr2:219745219..219745236,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.09e-16!53;CL:0000051!2.09e-16!53;CL:0000838!1.07e-15!52;CL:0002076!5.91e-10!43;CL:0000945!1.98e-09!24;CL:0000826!1.98e-09!24;CL:0002251!6.60e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.79e-12;24!CL:0002251;5.22e-10;20!CL:0000784;4.14e-07;3!CL:0000542;7.14e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.20e-12,24;CL:0000826,7.20e-12,24;CL:0000542,4.80e-11,53;CL:0000051,4.80e-11,53;CL:0000838,4.22e-10,52;CL:0002251,7.96e-10,20;CL:0000784,4.33e-07,3;CL:0002076,6.34e-07,42;CL:0000076,7.74e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000051;7.14e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.55e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.00e-10,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@WNT10A | |||
}} | }} |
Latest revision as of 18:48, 24 September 2015
Short description: | p2@WNT10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WNT10A_5end |
Coexpression cluster: | C2688_keratoacanthoma_oral_b_B_merkel_lymphangiectasia_pharyngeal |
Association with transcript: | -18bp_to_NM_025216, uc002vjd.1_5end |
EntrezGene: | WNT10A |
HGNC: | 13829 |
UniProt: | Q53S44Q9GZT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.20e-12 | 24 |
pro-B cell | 7.20e-12 | 24 |
lymphocyte | 4.80e-11 | 53 |
common lymphoid progenitor | 4.80e-11 | 53 |
lymphoid lineage restricted progenitor cell | 4.22e-10 | 52 |
epithelial cell of alimentary canal | 7.96e-10 | 20 |
plasmacytoid dendritic cell | 4.33e-07 | 3 |
endo-epithelial cell | 6.34e-07 | 42 |
squamous epithelial cell | 7.74e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.00e-10 | 14 |