FFCP PHASE1:Hg19::chr12:72667203..72667215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29953 | |EntrezGene=29953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30748 | |HGNC=30748 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000547300_5end | |association_with_transcript=-47bp_to_ENST00000547300_5end | ||
|cluster_id=chr12:72667203..72667215,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_11_at_TRHDE_5end | |description=CAGE_peak_11_at_TRHDE_5end | ||
|id=chr12:72667203..72667215,+ | |id=chr12:72667203..72667215,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.01e-55;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;6.22e-37;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.28e-37,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;6.47e-28;6!UBERON:0000996;3.25e-19;1!UBERON:0002680;7.22e-19;9!UBERON:0001895;7.22e-19;9!UBERON:0004733;2.51e-14;12!UBERON:0002028;2.51e-14;12!UBERON:0004732;2.83e-13;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.91e-28,6;UBERON:0006215,5.91e-28,6;UBERON:0000996,3.91e-19,1;UBERON:0002680,6.80e-19,9;UBERON:0001895,6.80e-19,9;UBERON:0010092,6.80e-19,9;UBERON:0004733,2.40e-14,12;UBERON:0002028,2.40e-14,12;UBERON:0007277,2.40e-14,12;UBERON:0004732,2.71e-13,13;UBERON:0003076,1.32e-11,15;UBERON:0003057,1.32e-11,15 | |||
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| ||
|short_description=p11@TRHDE | |short_description=p11@TRHDE | ||
}} | }} |
Latest revision as of 18:42, 24 September 2015
Short description: | p11@TRHDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TRHDE_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -47bp_to_ENST00000547300_5end |
EntrezGene: | TRHDE |
HGNC: | 30748 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.91e-28 | 6 |
rhombic lip | 5.91e-28 | 6 |
vagina | 3.91e-19 | 1 |
regional part of metencephalon | 6.80e-19 | 9 |
metencephalon | 6.80e-19 | 9 |
future metencephalon | 6.80e-19 | 9 |
segmental subdivision of hindbrain | 2.40e-14 | 12 |
hindbrain | 2.40e-14 | 12 |
presumptive hindbrain | 2.40e-14 | 12 |
segmental subdivision of nervous system | 2.71e-13 | 13 |
posterior neural tube | 1.32e-11 | 15 |
chordal neural plate | 1.32e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.28e-37 | 2 |