FFCP PHASE1:Hg19::chr18:74845949..74845955,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-310bp_to_ENST00000490754,ENST00000497479_5end | |association_with_transcript=-310bp_to_ENST00000490754,ENST00000497479_5end | ||
|cluster_id=chr18:74845949..74845955,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_47_at_MBP_5end | |description=CAGE_peak_47_at_MBP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000839!1.53e-45!70;CL:0000557!8.63e-45!71;CL:0000763!3.40e-42!112;CL:0000049!3.40e-42!112;CL:0002194!6.32e-42!63;CL:0000576!6.32e-42!63;CL:0000040!6.32e-42!63;CL:0000559!6.32e-42!63;CL:0000766!2.52e-41!76;CL:0002009!2.05e-40!65;CL:0002032!1.18e-28!165;CL:0000837!1.18e-28!165;CL:0000037!4.43e-27!172;CL:0000566!4.43e-27!172;CL:0002031!1.74e-25!124;CL:0000988!4.88e-25!182;CL:0002087!8.65e-22!119;CL:0000738!1.34e-21!140;CL:0002057!8.57e-20!42;CL:0000860!3.43e-18!45;CL:0000148!5.96e-18!10;CL:0000541!5.96e-18!10;CL:0000147!1.72e-12!14;CL:0002567!2.54e-12!3;CL:0000219!2.35e-11!390;CL:0000235!6.39e-09!10;CL:0000710!2.12e-08!20;CL:0000134!7.26e-08!358;CL:0002320!1.56e-07!365 | |ontology_enrichment_celltype=CL:0000839!1.53e-45!70;CL:0000557!8.63e-45!71;CL:0000763!3.40e-42!112;CL:0000049!3.40e-42!112;CL:0002194!6.32e-42!63;CL:0000576!6.32e-42!63;CL:0000040!6.32e-42!63;CL:0000559!6.32e-42!63;CL:0000766!2.52e-41!76;CL:0002009!2.05e-40!65;CL:0002032!1.18e-28!165;CL:0000837!1.18e-28!165;CL:0000037!4.43e-27!172;CL:0000566!4.43e-27!172;CL:0002031!1.74e-25!124;CL:0000988!4.88e-25!182;CL:0002087!8.65e-22!119;CL:0000738!1.34e-21!140;CL:0002057!8.57e-20!42;CL:0000860!3.43e-18!45;CL:0000148!5.96e-18!10;CL:0000541!5.96e-18!10;CL:0000147!1.72e-12!14;CL:0002567!2.54e-12!3;CL:0000219!2.35e-11!390;CL:0000235!6.39e-09!10;CL:0000710!2.12e-08!20;CL:0000134!7.26e-08!358;CL:0002320!1.56e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.99e-54;10!CL:0000147;2.04e-38;14!CL:0002567;2.18e-34;3!CL:0000710;9.57e-27;20!CL:0000075;1.14e-19;27!CL:0002077;8.74e-14;34!CL:0002566;9.91e-13;1!CL:0000235;2.47e-08;6!CL:0000840;3.13e-08;5!CL:0000473;2.74e-07;39!CL:0000234;2.74e-07;39 | |ontology_enrichment_celltype_v019=CL:0000148;5.99e-54;10!CL:0000147;2.04e-38;14!CL:0002567;2.18e-34;3!CL:0000710;9.57e-27;20!CL:0000075;1.14e-19;27!CL:0002077;8.74e-14;34!CL:0002566;9.91e-13;1!CL:0000235;2.47e-08;6!CL:0000840;3.13e-08;5!CL:0000473;2.74e-07;39!CL:0000234;2.74e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.39e-54,10;CL:0000541,4.39e-54,10;CL:0000147,1.64e-38,14;CL:0002567,1.39e-34,3;CL:0000710,8.21e-27,20;CL:0000075,1.02e-19,27;CL:0002077,1.54e-15,34;CL:0002566,8.85e-13,1;CL:0000333,3.73e-12,41;CL:0002194,7.50e-11,59;CL:0000576,7.50e-11,59;CL:0000040,7.50e-11,59;CL:0000559,7.50e-11,59;CL:0002009,1.79e-10,61;CL:0000839,1.26e-09,66;CL:0000557,1.81e-09,67;CL:0000763,8.98e-09,108;CL:0000049,8.98e-09,108;CL:0000766,9.27e-09,72;CL:0000133,2.26e-08,59;CL:0000235,3.02e-08,6;CL:0000840,3.25e-08,5;CL:0001029,3.25e-08,5;CL:0000473,6.49e-08,48;CL:0000234,6.49e-08,48;CL:0000221,8.84e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1240!1.01e-11!39;DOID:8692!5.26e-11!31;DOID:2531!2.60e-08!51;DOID:0060083!2.60e-08!51 | |ontology_enrichment_disease=DOID:1240!1.01e-11!39;DOID:8692!5.26e-11!31;DOID:2531!2.60e-08!51;DOID:0060083!2.60e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.30e-39!80;UBERON:0001474!1.35e-35!86;UBERON:0002390!1.10e-30!102;UBERON:0003061!1.10e-30!102;UBERON:0004765!4.11e-29!101;UBERON:0001434!4.11e-29!101;UBERON:0002193!3.33e-27!112;UBERON:0002405!2.82e-26!115;UBERON:0002204!1.99e-14!167;UBERON:0003081!6.24e-12!216;UBERON:0002384!1.14e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!7.30e-39!80;UBERON:0001474!1.35e-35!86;UBERON:0002390!1.10e-30!102;UBERON:0003061!1.10e-30!102;UBERON:0004765!4.11e-29!101;UBERON:0001434!4.11e-29!101;UBERON:0002193!3.33e-27!112;UBERON:0002405!2.82e-26!115;UBERON:0002204!1.99e-14!167;UBERON:0003081!6.24e-12!216;UBERON:0002384!1.14e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.75e-12;1!UBERON:0006518;2.75e-12;1!UBERON:0008949;2.75e-12;1!UBERON:0000101;2.75e-12;1!UBERON:0002167;2.75e-12;1 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.75e-12;1!UBERON:0006518;2.75e-12;1!UBERON:0008949;2.75e-12;1!UBERON:0000101;2.75e-12;1!UBERON:0002167;2.75e-12;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.85e-12,1;UBERON:0006518,3.85e-12,1;UBERON:0008949,3.85e-12,1;UBERON:0000101,3.85e-12,1;UBERON:0002167,3.85e-12,1;UBERON:0002371,2.95e-08,76;UBERON:0001474,1.36e-07,82;UBERON:0004765,7.60e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971680998056939,0.257575567634187,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,1.43846196161075,0,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,2.51248665256743,1.5644487552606,1.95469960234605,0,0,0,0.211255286311942,0,0.628975936525128,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,1.21890816109487,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.25248486685276,3.55588208036147,4.20187268114105,10.5495702489042,1.71072446022705,1.43958489784653,3.00343057843917,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,3.42352018549788,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2558420511602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971680998056939,0.257575567634187,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,1.43846196161075,0,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,2.51248665256743,1.5644487552606,1.95469960234605,0,0,0,0.211255286311942,0,0.628975936525128,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,1.21890816109487,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.25248486685276,3.55588208036147,4.20187268114105,10.5495702489042,1.71072446022705,1.43958489784653,3.00343057843917,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,3.42352018549788,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2558420511602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p47@MBP | |short_description=p47@MBP | ||
}} | }} |
Latest revision as of 18:37, 24 September 2015
Short description: | p47@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_MBP_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -310bp_to_ENST00000490754, ENST00000497479_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.39e-54 | 10 |
melanoblast | 4.39e-54 | 10 |
pigment cell | 1.64e-38 | 14 |
light melanocyte | 1.39e-34 | 3 |
neurecto-epithelial cell | 8.21e-27 | 20 |
columnar/cuboidal epithelial cell | 1.02e-19 | 27 |
ecto-epithelial cell | 1.54e-15 | 34 |
dark melanocyte | 8.85e-13 | 1 |
migratory neural crest cell | 3.73e-12 | 41 |
monopoietic cell | 7.50e-11 | 59 |
monocyte | 7.50e-11 | 59 |
monoblast | 7.50e-11 | 59 |
promonocyte | 7.50e-11 | 59 |
macrophage dendritic cell progenitor | 1.79e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-09 | 66 |
granulocyte monocyte progenitor cell | 1.81e-09 | 67 |
myeloid cell | 8.98e-09 | 108 |
common myeloid progenitor | 8.98e-09 | 108 |
myeloid leukocyte | 9.27e-09 | 72 |
neurectodermal cell | 2.26e-08 | 59 |
macrophage | 3.02e-08 | 6 |
immature conventional dendritic cell | 3.25e-08 | 5 |
common dendritic progenitor | 3.25e-08 | 5 |
defensive cell | 6.49e-08 | 48 |
phagocyte | 6.49e-08 | 48 |
ectodermal cell | 8.84e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.85e-12 | 1 |
right lung lobe | 3.85e-12 | 1 |
lower lobe of lung | 3.85e-12 | 1 |
lobe of lung | 3.85e-12 | 1 |
right lung | 3.85e-12 | 1 |
bone marrow | 2.95e-08 | 76 |
bone element | 1.36e-07 | 82 |
skeletal element | 7.60e-07 | 90 |