FFCP PHASE1:Hg19::chr2:219646861..219646879,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1593 | |EntrezGene=1593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2605 | |HGNC=2605 | ||
|TSSclassifier=strong | |||
|UniProt=F8WD90 | |UniProt=F8WD90 | ||
|association_with_transcript=0bp_to_ENST00000445971_5end | |association_with_transcript=0bp_to_ENST00000445971_5end | ||
|cluster_id=chr2:219646861..219646879,+ | |||
|coexpression_cluster_id=C848 | |coexpression_cluster_id=C848 | ||
|description=CAGE_peak_1_at_CYP27A1_5end | |description=CAGE_peak_1_at_CYP27A1_5end | ||
|id=chr2:219646861..219646879,+ | |id=chr2:219646861..219646879,+ | ||
|ontology_enrichment_celltype=CL:0000766!9.34e-23!76;CL:0002194!1.37e-21!63;CL:0000576!1.37e-21!63;CL:0000040!1.37e-21!63;CL:0000559!1.37e-21!63;CL:0002057!7.09e-21!42;CL:0002009!3.34e-20!65;CL:0000860!1.30e-17!45;CL:0000839!2.21e-17!70;CL:0000557!5.49e-17!71;CL:0000763!2.66e-07!112;CL:0000049!2.66e-07!112 | |ontology_enrichment_celltype=CL:0000766!9.34e-23!76;CL:0002194!1.37e-21!63;CL:0000576!1.37e-21!63;CL:0000040!1.37e-21!63;CL:0000559!1.37e-21!63;CL:0002057!7.09e-21!42;CL:0002009!3.34e-20!65;CL:0000860!1.30e-17!45;CL:0000839!2.21e-17!70;CL:0000557!5.49e-17!71;CL:0000763!2.66e-07!112;CL:0000049!2.66e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.35e-22;39!CL:0000234;4.35e-22;39!CL:0000860;1.84e-21;33!CL:0002057;1.84e-21;33!CL:0000576;5.41e-15;48!CL:0000766;2.43e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.68e-28,72;CL:0000473,4.06e-27,48;CL:0000234,4.06e-27,48;CL:0002194,6.30e-27,59;CL:0000576,6.30e-27,59;CL:0000040,6.30e-27,59;CL:0000559,6.30e-27,59;CL:0002009,3.93e-25,61;CL:0000860,2.21e-22,42;CL:0002057,2.21e-22,42;CL:0000839,9.99e-22,66;CL:0000557,5.26e-21,67;CL:0000763,1.58e-11,108;CL:0000049,1.58e-11,108;CL:0000738,9.23e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-26!115;UBERON:0002390!6.63e-16!102;UBERON:0003061!6.63e-16!102;UBERON:0002405!1.16e-15!115;UBERON:0002193!9.00e-15!112;UBERON:0002371!2.30e-14!80;UBERON:0001474!5.20e-12!86;UBERON:0000062!6.85e-12!511;UBERON:0004765!3.67e-11!101;UBERON:0001434!3.67e-11!101;UBERON:0002204!1.81e-10!167;UBERON:0000922!2.14e-09!612;UBERON:0000468!3.34e-09!659;UBERON:0000467!4.44e-09!625;UBERON:0000480!7.10e-09!626;UBERON:0002050!7.13e-09!605;UBERON:0005423!7.13e-09!605;UBERON:0000923!8.15e-09!604;UBERON:0005291!8.15e-09!604;UBERON:0006598!8.15e-09!604;UBERON:0002532!8.15e-09!604;UBERON:0003081!1.82e-07!216 | |ontology_enrichment_uberon=UBERON:0007023!5.11e-26!115;UBERON:0002390!6.63e-16!102;UBERON:0003061!6.63e-16!102;UBERON:0002405!1.16e-15!115;UBERON:0002193!9.00e-15!112;UBERON:0002371!2.30e-14!80;UBERON:0001474!5.20e-12!86;UBERON:0000062!6.85e-12!511;UBERON:0004765!3.67e-11!101;UBERON:0001434!3.67e-11!101;UBERON:0002204!1.81e-10!167;UBERON:0000922!2.14e-09!612;UBERON:0000468!3.34e-09!659;UBERON:0000467!4.44e-09!625;UBERON:0000480!7.10e-09!626;UBERON:0002050!7.13e-09!605;UBERON:0005423!7.13e-09!605;UBERON:0000923!8.15e-09!604;UBERON:0005291!8.15e-09!604;UBERON:0006598!8.15e-09!604;UBERON:0002532!8.15e-09!604;UBERON:0003081!1.82e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.07e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.80e-29,114;UBERON:0002390,1.66e-20,98;UBERON:0003061,1.66e-20,98;UBERON:0002193,2.32e-18,108;UBERON:0002371,5.48e-18,76;UBERON:0001474,2.84e-15,82;UBERON:0002405,5.89e-15,93;UBERON:0004765,9.60e-15,90;UBERON:0001434,1.31e-13,100;UBERON:0002204,9.44e-11,167;UBERON:0005423,1.19e-09,581;UBERON:0000922,3.09e-09,592;UBERON:0000923,8.42e-08,560;UBERON:0010316,8.42e-08,560;UBERON:0005291,8.42e-08,560;UBERON:0006598,8.42e-08,560;UBERON:0010317,8.42e-08,560;UBERON:0002532,8.42e-08,560;UBERON:0002050,1.88e-07,564 | |||
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|phase1_expression=0.54503513781167,0.856402095563933,0.422863212287913,3.00219895059391,1.78784437770915,1.74467704820074,0,1.26343974685366,0.261185628199839,1.96587149201207,2.79120467188971,0,0.791300934685361,1.60896258848061,4.30816588446291,10.0848771967766,3.01347264011988,0,0.975865597581014,2.09305798730539,0.408001382488506,4.70182082217132,0.286235987131057,0.684372125364421,0.502170558379211,0,0,0.0787107813136792,26.7487708257255,8.44424675813868,16.4105090715041,0,0,0,0,0,0,17.1738576644882,16.8457335874919,26.9093479687656,261.981104860711,391.263548550927,264.53010796031,83.8947837758088,90.3123505416254,86.6025098440504,104.128208533747,80.177738164256,83.620720141678,77.9646383193028,32.5324097291958,56.0462884835947,81.0152349731054,29.0468107612722,93.4442757500958,90.5445653199929,99.8836509211716,82.0240718224559,76.2148892003547,37.869625194979,49.8682958123252,117.756914166658,40.092195181948,72.8844323410907,81.8390052932607,48.795129323438,59.1681136545796,90.9520168229411,37.5467701262545,60.5956876727275,90.2045258923719,34.9863754188186,69.3052628495537,6.5489138756702,7.65375479874157,18.0306435137203,55.2656865240756,83.4983524198775,41.1457501944525,0.570025487482497,0.19891667719909,0.365328307529268,0,1.09227722252426,0.889509253863555,0.853460445133014,0,0,1.98313461835459,0,0,1.17447437874188,0.382273228125229,0,2.80254281490768,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.451725357233318,0.895906278080929,2.49861453104692,4.73554504088034,2.46338399076314,0,0.267440195783507,0,14.6284119788377,9.38981203585091,0.511450247374121,1.80719576192283,5.0133791063589,6.80778639115871,6.36228757640879,26.764917866645,0.378139268656271,0.221729397462564,0.614843499851882,29.0118652227433,0.728590576585084,0.370784442784429,44.4629929306916,46.4926398589043,63.6868630885364,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.417989933073621,0,1.06729878806013,0,0,0.760272105718513,0.976248230192678,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.183201743930407,32.9451043590158,127.967487168947,0,0,0.12663051166458,0,0.286836620748814,3.19201543978521,1.12135520028461,0,0,2.17847724779836,0.134710672069688,0,1.05950199351452,0,2.34321431833797,0.624320153660641,1.71141546463335,1.34503812496621,0.587172493218824,0.323745888736263,0.702254033511242,0.408308342509787,0.859840221182376,1.75653827998801,2.37600571456411,4.94533858557114,0.910161361938026,5.03032699271367,2.18836948140286,0.500474079487857,0.831192346452549,0.438977620880838,0,5.40857012063748,0,0.89694817844431,2.34913127700424,0.635795703478686,0.600182192168805,0.721367704669072,0.515281080091258,0.37223371266318,0.168776332241266,0.0974370051611986,0.757301322732344,0.920498986422993,2.26304479546337,0.710019185033229,0.201504196455281,0.847802961552438,0.773043412653187,0.545492241181669,0.286804595389004,0.243947412259191,0.397589304964456,3.48581828608555,0.829288440122964,2.27088765788066,0.72995471815166,9.38697193978896,0.643240938192885,6.90674606762403,15.7885095530873,12.9938306700525,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.6462960453256,14.7008711385542,545.046649733873,296.813819436643,420.051623650478,0,13.8976935553718,0.343135620597051,0,0,0,0.370353780634118,0.651616610620649,3.11980435583874,0,2.66639931442677,0.117408694235822,0.721832238805369,0,0.761016608938393,0,0,153.885628804623,358.728538458451,251.335295430239,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,0,1.03664057770386,0.288239906833923,0.50496973370552,27.431090334217,29.7950971935457,112.528749321645,63.2968050284009,20.8739810187747,56.1641518168126,42.3023120293256,0.224262168690721,1.30788020649984,0.07333828582095,1.68053230485111,32.1890801266694,0,1.06375246633948,0,3.08648849114571,0,0.532844358032199,0.857867961948885,7.05408087008876,2.46972101034231,0,0.710783897485092,2.37585561880029,1.20575750823834,3.48613383440118,2.89921674427965,802.716952231857,412.855329157208,552.384921445543,0.479249710983165,0,1.42636905040718,0.144781306667579,1.43833425785268,1.96967059563885,0,0.591092280605782,0.215627574859517,1.54011643535698,1.01637849688985,0,0,1.34013012267479,0,45.6894284607781,71.798750208966,37.7118117226792,6.13457458595699,14.004774589671,2.44138521329762,1.03985430765404,1.42743191037729,0.946214490203608,1.17141414992713,6.92176029373754,15.9185252839189,3.10419213877515,0,0.553107505625109,1.21637060255316,3.72022199179207,10.6374461381365,12.6128495934961,9.70713903683776,7.79111171965144,0,0,1.20956117331872,0.248107807818777,0.306923946576125,0,0.128139149255701,0.511707249066704,0,1.48418066444991,0,0,0,0,0.116210378459959,5.68039413080624,0,0.276242966807689,0.803701137152247,3.82391452814106,17.4395471896034,14.4383876130372,12.8615612964373,42.3548875355502,49.6873363821086,17.7326736540031,0,0.340187410553031,1.72732732881711,0,5.68987518842091,17.057452311065,8.6657932835313,7.479684080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| ||
|short_description=p1@CYP27A1 | |short_description=p1@CYP27A1 | ||
}} | }} |
Latest revision as of 18:37, 24 September 2015
Short description: | p1@CYP27A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP27A1_5end |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | 0bp_to_ENST00000445971_5end |
EntrezGene: | CYP27A1 |
HGNC: | 2605 |
UniProt: | F8WD90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.68e-28 | 72 |
defensive cell | 4.06e-27 | 48 |
phagocyte | 4.06e-27 | 48 |
monopoietic cell | 6.30e-27 | 59 |
monocyte | 6.30e-27 | 59 |
monoblast | 6.30e-27 | 59 |
promonocyte | 6.30e-27 | 59 |
macrophage dendritic cell progenitor | 3.93e-25 | 61 |
classical monocyte | 2.21e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-22 | 42 |
myeloid lineage restricted progenitor cell | 9.99e-22 | 66 |
granulocyte monocyte progenitor cell | 5.26e-21 | 67 |
myeloid cell | 1.58e-11 | 108 |
common myeloid progenitor | 1.58e-11 | 108 |
leukocyte | 9.23e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.80e-29 | 114 |
hematopoietic system | 1.66e-20 | 98 |
blood island | 1.66e-20 | 98 |
hemolymphoid system | 2.32e-18 | 108 |
bone marrow | 5.48e-18 | 76 |
bone element | 2.84e-15 | 82 |
immune system | 5.89e-15 | 93 |
skeletal element | 9.60e-15 | 90 |
skeletal system | 1.31e-13 | 100 |
musculoskeletal system | 9.44e-11 | 167 |
developing anatomical structure | 1.19e-09 | 581 |
embryo | 3.09e-09 | 592 |
germ layer | 8.42e-08 | 560 |
germ layer / neural crest | 8.42e-08 | 560 |
embryonic tissue | 8.42e-08 | 560 |
presumptive structure | 8.42e-08 | 560 |
germ layer / neural crest derived structure | 8.42e-08 | 560 |
epiblast (generic) | 8.42e-08 | 560 |
embryonic structure | 1.88e-07 | 564 |