FFCP PHASE1:Hg19::chr18:74844067..74844086,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:74844067..74844086,-
|short_description=p32@MBP
|description=CAGE_peak_32_at_MBP_5end
|association_with_transcript=-427bp_to_ENST00000397863_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-427bp_to_ENST00000397863_5end | |||
|cluster_id=chr18:74844067..74844086,- | |||
|description=CAGE_peak_32_at_MBP_5end | |||
|id=chr18:74844067..74844086,- | |||
|ontology_enrichment_celltype=CL:0000839!3.31e-25!70;CL:0000766!1.20e-24!76;CL:0000860!2.17e-24!45;CL:0002057!3.28e-24!42;CL:0000557!9.59e-24!71;CL:0002194!1.88e-22!63;CL:0000576!1.88e-22!63;CL:0000040!1.88e-22!63;CL:0000559!1.88e-22!63;CL:0002009!4.83e-21!65;CL:0000763!1.18e-20!112;CL:0000049!1.18e-20!112;CL:0000037!1.60e-17!172;CL:0000566!1.60e-17!172;CL:0000988!2.63e-17!182;CL:0000738!8.30e-17!140;CL:0002032!2.67e-16!165;CL:0000837!2.67e-16!165;CL:0002031!4.60e-16!124;CL:0002087!1.15e-15!119;CL:0002393!4.91e-08!9;CL:0002397!4.91e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.34e-22;33!CL:0002057;2.34e-22;33!CL:0000766;7.08e-22;69!CL:0000576;1.60e-20;48!CL:0000473;5.39e-20;39!CL:0000234;5.39e-20;39!CL:0002393;1.45e-18;6!CL:0002397;1.45e-18;6!CL:0000094;1.25e-09;8!CL:0000763;4.18e-09;100!CL:0000097;4.64e-09;5!CL:0002567;2.32e-07;3!CL:0000775;2.32e-07;3!CL:0000081;5.24e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.11e-42,72;CL:0000860,1.39e-38,42;CL:0002057,1.39e-38,42;CL:0000473,1.14e-36,48;CL:0000234,1.14e-36,48;CL:0000557,7.89e-36,67;CL:0000839,2.01e-33,66;CL:0000763,1.45e-28,108;CL:0000049,1.45e-28,108;CL:0002194,2.50e-28,59;CL:0000576,2.50e-28,59;CL:0000040,2.50e-28,59;CL:0000559,2.50e-28,59;CL:0002009,2.98e-27,61;CL:0000738,2.53e-21,136;CL:0002032,1.91e-18,161;CL:0000837,1.91e-18,161;CL:0002393,9.11e-18,9;CL:0002397,9.11e-18,9;CL:0002031,1.61e-17,120;CL:0000037,2.13e-17,168;CL:0000988,3.58e-16,177;CL:0002087,1.21e-13,115;CL:0000094,1.11e-09,8;CL:0000097,5.71e-09,5;CL:0002028,5.71e-09,5;CL:0002567,2.26e-07,3;CL:0000775,2.56e-07,3;CL:0000081,4.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.39e-30;42!CL:0000049;8.60e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.40e-20!102;UBERON:0003061!7.40e-20!102;UBERON:0002371!2.64e-19!80;UBERON:0001474!2.76e-17!86;UBERON:0002193!3.81e-16!112;UBERON:0004765!2.56e-13!101;UBERON:0001434!2.56e-13!101;UBERON:0002405!8.08e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.03e-31,76;UBERON:0001474,2.79e-28,82;UBERON:0002390,3.44e-27,98;UBERON:0003061,3.44e-27,98;UBERON:0004765,2.84e-25,90;UBERON:0002405,2.81e-24,93;UBERON:0002193,4.09e-24,108;UBERON:0001434,3.47e-22,100;UBERON:0002204,3.44e-12,167;UBERON:0003081,5.22e-11,203;UBERON:0000926,7.84e-07,315;UBERON:0004120,7.84e-07,315;UBERON:0006603,7.84e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.534893840235659,0.328402357799783,0.314843125254717,0,0,1.54816123316076,0.919421224478927,0,0,0.232401601740905,0.426507697462265,0.587200878669695,3.32397245119126,1.80490002723128,1.73608696572681,0.223915474239924,0.971680998056939,0.77272670290256,0.872389432677388,0.377875943688809,1.4555043671269,1.39457422143411,0.411167888021826,1.54853185447552,1.7261543539329,2.0492856522328,1.18241114944293,2.41321976515633,1.29096936716765,5.41705946377367,1.31769637679823,0.545812300115692,0.898893937780338,0.306083892370903,0.641858054152187,1.27867425159808,0.659702600373432,0.598390972864896,0,0.580418477257168,0,0.622822248995575,1.7587406567972,2.08593167368081,3.04064382587163,0,0.736555271975129,0.316462387440884,1.05627643155971,1.70083439972035,0.838634582033504,0.898629049171961,0.450530678524519,0.803627933485401,1.71007646244749,0.39783335439818,0.91332076882317,0,0,0,0,0,0,0.661044872784862,0.954053754535364,1.1384259382189,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.263504357079378,0,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,0.529636723252875,1.43418310374407,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.484938170456436,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0.653638332277218,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0.492434012174795,0.468008530278475,0.445893486866185,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.528290604079356,3.7319060797339,1.15295962733569,3.40854570251226,0.190493682876507,0.381988425558278,2.34434894420094,3.4214489204541,0.514137463516618,0.600686115687835,1.14330573052231,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.898401253958239,0,0,0,0,0,2.24702107184155,0,3.31532410748828,0,0.500170521059677,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.413536052245775,0.215714200818617,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0.276242966807689,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0.522870902049801,0.512900250232778,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,1.70894156152249,0.476463550915578,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0,0,0.199579371432817,0.383010740264733,0.846694330895531,0,0,0.684704037099577,0.47003968731907,0,0.169291777801603,0,0.80719882876419,0,0,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0.66614393599564,0,0.37428108081644,0.146508179271894,0,0.66866030566487,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,1.0077309914171,0,0.123084805461069,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0,0.139423744278603,0.307801034015188,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.317873157960757,0,0.163232808159148,0,0,0,0.265372693510018,1.22206028986725,0,0.247127877893006,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.365446585430928,0.164230914106418,0.193978032976839,0.882561266915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| 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| ||
|short_description=p32@MBP | |||
}} | }} |
Latest revision as of 18:30, 24 September 2015
Short description: | p32@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_MBP_5end |
Coexpression cluster: | NA |
Association with transcript: | -427bp_to_ENST00000397863_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.11e-42 | 72 |
classical monocyte | 1.39e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-38 | 42 |
defensive cell | 1.14e-36 | 48 |
phagocyte | 1.14e-36 | 48 |
granulocyte monocyte progenitor cell | 7.89e-36 | 67 |
myeloid lineage restricted progenitor cell | 2.01e-33 | 66 |
myeloid cell | 1.45e-28 | 108 |
common myeloid progenitor | 1.45e-28 | 108 |
monopoietic cell | 2.50e-28 | 59 |
monocyte | 2.50e-28 | 59 |
monoblast | 2.50e-28 | 59 |
promonocyte | 2.50e-28 | 59 |
macrophage dendritic cell progenitor | 2.98e-27 | 61 |
leukocyte | 2.53e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.91e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-18 | 161 |
intermediate monocyte | 9.11e-18 | 9 |
CD14-positive, CD16-positive monocyte | 9.11e-18 | 9 |
hematopoietic lineage restricted progenitor cell | 1.61e-17 | 120 |
hematopoietic stem cell | 2.13e-17 | 168 |
hematopoietic cell | 3.58e-16 | 177 |
nongranular leukocyte | 1.21e-13 | 115 |
granulocyte | 1.11e-09 | 8 |
mast cell | 5.71e-09 | 5 |
basophil mast progenitor cell | 5.71e-09 | 5 |
light melanocyte | 2.26e-07 | 3 |
neutrophil | 2.56e-07 | 3 |
blood cell | 4.82e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.03e-31 | 76 |
bone element | 2.79e-28 | 82 |
hematopoietic system | 3.44e-27 | 98 |
blood island | 3.44e-27 | 98 |
skeletal element | 2.84e-25 | 90 |
immune system | 2.81e-24 | 93 |
hemolymphoid system | 4.09e-24 | 108 |
skeletal system | 3.47e-22 | 100 |
musculoskeletal system | 3.44e-12 | 167 |
lateral plate mesoderm | 5.22e-11 | 203 |
mesoderm | 7.84e-07 | 315 |
mesoderm-derived structure | 7.84e-07 | 315 |
presumptive mesoderm | 7.84e-07 | 315 |