FFCP PHASE1:Hg19::chr11:102668601..102668604,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7155 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-449bp_to_AK225495_5end | |||
|cluster_id=chr11:102668601..102668604,- | |||
|coexpression_cluster_id=C1326 | |||
|description=CAGE_peak_14_at_MMP1_5end | |||
|id=chr11:102668601..102668604,- | |||
|ontology_enrichment_celltype=CL:0000359!1.27e-14!32;CL:0000055!2.16e-14!180;CL:0002594!6.13e-13!4;CL:0000057!3.25e-11!75;CL:0000192!2.09e-10!42;CL:0000514!2.09e-10!42;CL:0002494!3.12e-09!16;CL:0000569!1.31e-08!4;CL:0000011!1.31e-08!4;CL:0002551!2.12e-08!6;CL:1000306!7.28e-08!4;CL:0002547!7.28e-08!4;CL:0000183!8.40e-08!59;CL:0000393!1.39e-07!60;CL:0000211!1.39e-07!60;CL:0000187!1.92e-07!54;CL:0000680!6.66e-07!57;CL:0000056!6.66e-07!57;CL:0000355!6.66e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000569;6.10e-50;4!CL:0002494;2.21e-22;16!CL:0002589;1.85e-12;2!CL:0002592;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,7.22e-50,4;CL:0000011,7.22e-50,4;CL:0002494,2.40e-22,16;CL:0002589,1.85e-12,2;CL:0002592,1.30e-08,3;CL:0000359,7.46e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000011;6.10e-50;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.13e-21!42;UBERON:0003509!8.13e-21!42;UBERON:0004572!8.13e-21!42;UBERON:0004872!2.87e-19!84;UBERON:0001981!2.29e-18!60;UBERON:0007500!2.29e-18!60;UBERON:0004537!2.29e-18!60;UBERON:0006965!2.29e-18!60;UBERON:0004573!1.78e-16!33;UBERON:0004571!1.78e-16!33;UBERON:0003914!1.40e-15!118;UBERON:0000055!2.94e-15!69;UBERON:0004535!4.01e-13!110;UBERON:0001310!6.13e-13!4;UBERON:0002049!1.19e-12!79;UBERON:0007798!1.19e-12!79;UBERON:0001009!1.34e-12!113;UBERON:0000914!1.78e-10!83;UBERON:0002329!1.78e-10!83;UBERON:0003077!1.78e-10!83;UBERON:0003059!1.78e-10!83;UBERON:0007282!1.78e-10!83;UBERON:0009618!1.78e-10!83;UBERON:0007285!1.78e-10!83;UBERON:0004290!2.95e-09!70;UBERON:0000415!7.28e-08!4;UBERON:0007240!7.28e-08!4;UBERON:0005742!7.28e-08!4;UBERON:0005734!7.28e-08!4;UBERON:0004664!7.28e-08!4;UBERON:0004663!7.28e-08!4;UBERON:0000948!1.99e-07!24;UBERON:0005498!1.99e-07!24;UBERON:0004140!1.99e-07!24;UBERON:0009881!1.99e-07!24;UBERON:0004141!1.99e-07!24;UBERON:0003084!1.99e-07!24;UBERON:0007005!1.99e-07!24;UBERON:0004139!1.99e-07!24;UBERON:0004291!1.99e-07!24;UBERON:0000486!2.50e-07!82;UBERON:0000025!2.52e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.03e-16;22!UBERON:0007100;1.67e-14;25!UBERON:0001529;1.85e-12;2!UBERON:0007204;1.85e-12;2!UBERON:0003498;1.26e-08;3!UBERON:0005985;1.26e-08;3!UBERON:0001621;1.26e-08;3!UBERON:0004573;2.96e-07;33!UBERON:0004571;2.96e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,4.58e-15,24;UBERON:0005498,4.58e-15,24;UBERON:0004140,4.58e-15,24;UBERON:0009881,4.58e-15,24;UBERON:0004141,4.58e-15,24;UBERON:0003084,4.58e-15,24;UBERON:0007005,4.58e-15,24;UBERON:0004139,4.58e-15,24;UBERON:0004291,4.58e-15,24;UBERON:0007100,1.93e-13,27;UBERON:0001529,1.85e-12,2;UBERON:0007204,1.85e-12,2;UBERON:0003914,7.77e-12,117;UBERON:0004872,1.43e-09,83;UBERON:0001621,1.30e-08,3;UBERON:0003103,2.90e-08,68;UBERON:0004535,2.87e-07,109;UBERON:0001009,4.52e-07,112;UBERON:0000025,4.69e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.794455084879313,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,1.53084334748864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0,0,0,2.03856641014312,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,0,1.26377536871694,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,0,0.235265819698172,0,0,0.298509605773748,0.467426619694449,0,0.189403005275089,0,0,1.37304041038154,0,1.24349760466224,8.13203324942987,0.955780602982214,0,0,0,0,0,0,0,0,4.54621648006399,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p14@MMP1 | |||
}} |
Latest revision as of 18:30, 24 September 2015
Short description: | p14@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MMP1_5end |
Coexpression cluster: | C1326_mesenchymal_CD14_Fibroblast_Smooth_Preadipocyte_Endothelial_Renal |
Association with transcript: | -449bp_to_AK225495_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 7.22e-50 | 4 |
migratory trunk neural crest cell | 7.22e-50 | 4 |
cardiocyte | 2.40e-22 | 16 |
smooth muscle cell of the brachiocephalic vasculature | 1.85e-12 | 2 |
smooth muscle cell of the coronary artery | 1.30e-08 | 3 |
vascular associated smooth muscle cell | 7.46e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
heart | 4.58e-15 | 24 |
primitive heart tube | 4.58e-15 | 24 |
primary heart field | 4.58e-15 | 24 |
anterior lateral plate mesoderm | 4.58e-15 | 24 |
heart tube | 4.58e-15 | 24 |
heart primordium | 4.58e-15 | 24 |
cardiac mesoderm | 4.58e-15 | 24 |
cardiogenic plate | 4.58e-15 | 24 |
heart rudiment | 4.58e-15 | 24 |
primary circulatory organ | 1.93e-13 | 27 |
brachiocephalic artery | 1.85e-12 | 2 |
brachiocephalic vasculature | 1.85e-12 | 2 |
epithelial tube | 7.77e-12 | 117 |
splanchnic layer of lateral plate mesoderm | 1.43e-09 | 83 |
coronary artery | 1.30e-08 | 3 |
compound organ | 2.90e-08 | 68 |
cardiovascular system | 2.87e-07 | 109 |
circulatory system | 4.52e-07 | 112 |
tube | 4.69e-07 | 192 |