FFCP PHASE1:Hg19::chr3:129612591..129612608,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC87,O94876 | |UniProt=E9PC87,O94876 | ||
|association_with_transcript=-172bp_to_ENST00000426664,ENST00000515024,NM_001128224_5end | |association_with_transcript=-172bp_to_ENST00000426664,ENST00000515024,NM_001128224_5end | ||
|cluster_id=chr3:129612591..129612608,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_3_at_TMCC1_5end | |description=CAGE_peak_3_at_TMCC1_5end | ||
|id=chr3:129612591..129612608,- | |id=chr3:129612591..129612608,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-29!115;UBERON:0001049!7.20e-13!57;UBERON:0005068!7.20e-13!57;UBERON:0006241!7.20e-13!57;UBERON:0007135!7.20e-13!57;UBERON:0001017!2.35e-12!82;UBERON:0000073!7.96e-12!94;UBERON:0001016!7.96e-12!94;UBERON:0005743!9.40e-12!86;UBERON:0000955!2.77e-11!69;UBERON:0006238!2.77e-11!69;UBERON:0002616!3.30e-11!59;UBERON:0002346!1.22e-10!90;UBERON:0003080!2.14e-10!42;UBERON:0003075!2.49e-10!86;UBERON:0007284!2.49e-10!86;UBERON:0002780!5.48e-10!41;UBERON:0001890!5.48e-10!41;UBERON:0006240!5.48e-10!41;UBERON:0002020!8.06e-09!34;UBERON:0003528!8.06e-09!34;UBERON:0001893!9.47e-09!34;UBERON:0002791!2.59e-08!33;UBERON:0001869!6.77e-08!32;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.72e-29!115;UBERON:0001049!7.20e-13!57;UBERON:0005068!7.20e-13!57;UBERON:0006241!7.20e-13!57;UBERON:0007135!7.20e-13!57;UBERON:0001017!2.35e-12!82;UBERON:0000073!7.96e-12!94;UBERON:0001016!7.96e-12!94;UBERON:0005743!9.40e-12!86;UBERON:0000955!2.77e-11!69;UBERON:0006238!2.77e-11!69;UBERON:0002616!3.30e-11!59;UBERON:0002346!1.22e-10!90;UBERON:0003080!2.14e-10!42;UBERON:0003075!2.49e-10!86;UBERON:0007284!2.49e-10!86;UBERON:0002780!5.48e-10!41;UBERON:0001890!5.48e-10!41;UBERON:0006240!5.48e-10!41;UBERON:0002020!8.06e-09!34;UBERON:0003528!8.06e-09!34;UBERON:0001893!9.47e-09!34;UBERON:0002791!2.59e-08!33;UBERON:0001869!6.77e-08!32;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.25e-11;34!UBERON:0003528;9.61e-11;34!UBERON:0002020;9.61e-11;34!UBERON:0002780;1.24e-10;41!UBERON:0001890;1.24e-10;41!UBERON:0001869;2.98e-10;32!UBERON:0002791;3.78e-10;32!UBERON:0007023;6.51e-10;114!UBERON:0002619;7.17e-10;22!UBERON:0000956;2.66e-09;25!UBERON:0000203;2.66e-09;25!UBERON:0000073;3.36e-09;53!UBERON:0002616;3.36e-09;53!UBERON:0001950;1.40e-08;20!UBERON:0000955;6.29e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-41,114;UBERON:0000073,1.41e-17,53;UBERON:0002616,1.41e-17,53;UBERON:0001049,2.28e-17,56;UBERON:0005068,2.28e-17,56;UBERON:0006241,2.28e-17,56;UBERON:0007135,2.28e-17,56;UBERON:0002780,5.48e-15,41;UBERON:0001890,5.48e-15,41;UBERON:0003080,5.48e-15,41;UBERON:0006240,5.48e-15,41;UBERON:0001017,8.67e-15,81;UBERON:0003528,1.98e-14,34;UBERON:0002020,1.98e-14,34;UBERON:0001893,2.64e-14,34;UBERON:0000955,2.79e-14,68;UBERON:0006238,2.79e-14,68;UBERON:0001016,3.85e-14,89;UBERON:0001869,9.30e-13,32;UBERON:0002791,1.07e-12,32;UBERON:0002346,1.51e-12,86;UBERON:0003075,3.41e-12,82;UBERON:0007284,3.41e-12,82;UBERON:0002619,1.14e-10,22;UBERON:0000956,4.50e-10,25;UBERON:0000203,4.50e-10,25;UBERON:0001950,3.89e-09,20;UBERON:0003056,1.28e-08,61;UBERON:0010371,8.97e-08,104;UBERON:0004121,2.81e-07,171;UBERON:0000924,2.81e-07,171;UBERON:0006601,2.81e-07,171;UBERON:0011216,2.98e-07,223 | |||
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| ||
|short_description=p3@TMCC1 | |short_description=p3@TMCC1 | ||
}} | }} |
Latest revision as of 18:28, 24 September 2015
Short description: | p3@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMCC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -172bp_to_ENST00000426664, ENST00000515024, NM_001128224_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | E9PC87O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.41e-41 | 114 |
regional part of nervous system | 1.41e-17 | 53 |
regional part of brain | 1.41e-17 | 53 |
neural tube | 2.28e-17 | 56 |
neural rod | 2.28e-17 | 56 |
future spinal cord | 2.28e-17 | 56 |
neural keel | 2.28e-17 | 56 |
regional part of forebrain | 5.48e-15 | 41 |
forebrain | 5.48e-15 | 41 |
anterior neural tube | 5.48e-15 | 41 |
future forebrain | 5.48e-15 | 41 |
central nervous system | 8.67e-15 | 81 |
brain grey matter | 1.98e-14 | 34 |
gray matter | 1.98e-14 | 34 |
telencephalon | 2.64e-14 | 34 |
brain | 2.79e-14 | 68 |
future brain | 2.79e-14 | 68 |
nervous system | 3.85e-14 | 89 |
cerebral hemisphere | 9.30e-13 | 32 |
regional part of telencephalon | 1.07e-12 | 32 |
neurectoderm | 1.51e-12 | 86 |
neural plate | 3.41e-12 | 82 |
presumptive neural plate | 3.41e-12 | 82 |
regional part of cerebral cortex | 1.14e-10 | 22 |
cerebral cortex | 4.50e-10 | 25 |
pallium | 4.50e-10 | 25 |
neocortex | 3.89e-09 | 20 |
pre-chordal neural plate | 1.28e-08 | 61 |
ecto-epithelium | 8.97e-08 | 104 |
ectoderm-derived structure | 2.81e-07 | 171 |
ectoderm | 2.81e-07 | 171 |
presumptive ectoderm | 2.81e-07 | 171 |
organ system subdivision | 2.98e-07 | 223 |