FFCP PHASE1:Hg19::chr3:129546763..129546780,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt=O94876 | |UniProt=O94876 | ||
|association_with_transcript=400bp_to_CR749206_5end | |association_with_transcript=400bp_to_CR749206_5end | ||
|cluster_id=chr3:129546763..129546780,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_17_at_TMCC1_5end | |description=CAGE_peak_17_at_TMCC1_5end | ||
|id=chr3:129546763..129546780,- | |id=chr3:129546763..129546780,- | ||
|ontology_enrichment_celltype=CL:0000766!7.76e-33!76;CL:0000738!5.01e-30!140;CL:0002087!2.58e-24!119;CL:0002057!2.25e-23!42;CL:0002194!6.30e-23!63;CL:0000576!6.30e-23!63;CL:0000040!6.30e-23!63;CL:0000559!6.30e-23!63;CL:0000839!7.07e-23!70;CL:0000557!2.31e-22!71;CL:0000037!5.61e-22!172;CL:0000566!5.61e-22!172;CL:0002009!7.93e-22!65;CL:0002031!2.91e-21!124;CL:0000988!3.94e-21!182;CL:0000860!4.16e-21!45;CL:0002032!5.17e-21!165;CL:0000837!5.17e-21!165;CL:0000763!7.65e-19!112;CL:0000049!7.65e-19!112;CL:0002393!2.26e-13!9;CL:0002397!2.26e-13!9;CL:0000094!1.56e-12!8;CL:0000081!1.67e-08!11 | |ontology_enrichment_celltype=CL:0000766!7.76e-33!76;CL:0000738!5.01e-30!140;CL:0002087!2.58e-24!119;CL:0002057!2.25e-23!42;CL:0002194!6.30e-23!63;CL:0000576!6.30e-23!63;CL:0000040!6.30e-23!63;CL:0000559!6.30e-23!63;CL:0000839!7.07e-23!70;CL:0000557!2.31e-22!71;CL:0000037!5.61e-22!172;CL:0000566!5.61e-22!172;CL:0002009!7.93e-22!65;CL:0002031!2.91e-21!124;CL:0000988!3.94e-21!182;CL:0000860!4.16e-21!45;CL:0002032!5.17e-21!165;CL:0000837!5.17e-21!165;CL:0000763!7.65e-19!112;CL:0000049!7.65e-19!112;CL:0002393!2.26e-13!9;CL:0002397!2.26e-13!9;CL:0000094!1.56e-12!8;CL:0000081!1.67e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.54e-49;8!CL:0000081;1.06e-35;11!CL:0000235;7.73e-34;6!CL:0000775;9.58e-26;3!CL:0002393;2.32e-21;6!CL:0002397;2.32e-21;6!CL:0000766;1.19e-19;69!CL:0000771;9.06e-18;2!CL:0000767;2.31e-11;3!CL:0000473;1.52e-10;39!CL:0000234;1.52e-10;39!CL:0000763;6.46e-09;100!CL:0000576;1.51e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.63e-49,8;CL:0000766,6.73e-45,72;CL:0000081,1.37e-35,11;CL:0000235,9.81e-34,6;CL:0000763,6.16e-29,108;CL:0000049,6.16e-29,108;CL:0000775,9.59e-26,3;CL:0000473,1.01e-25,48;CL:0000234,1.01e-25,48;CL:0000738,1.04e-24,136;CL:0002194,1.80e-23,59;CL:0000576,1.80e-23,59;CL:0000040,1.80e-23,59;CL:0000559,1.80e-23,59;CL:0002009,1.23e-22,61;CL:0002393,5.59e-22,9;CL:0002397,5.59e-22,9;CL:0000839,9.22e-21,66;CL:0000557,2.02e-20,67;CL:0000037,2.41e-19,168;CL:0002032,2.58e-18,161;CL:0000837,2.58e-18,161;CL:0000988,3.51e-18,177;CL:0000771,9.07e-18,2;CL:0002087,1.04e-12,115;CL:0000767,3.01e-11,3;CL:0000860,5.66e-11,42;CL:0002057,5.66e-11,42;CL:0002031,2.20e-10,120;CL:0000134,3.20e-07,354;CL:0002320,5.26e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.30e-08;108!CL:0002057;2.97e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-29!102;UBERON:0003061!1.45e-29!102;UBERON:0002193!3.32e-26!112;UBERON:0002371!2.09e-19!80;UBERON:0001474!4.08e-17!86;UBERON:0002405!1.98e-14!115;UBERON:0004765!1.15e-12!101;UBERON:0001434!1.15e-12!101;UBERON:0000178!3.48e-11!15;UBERON:0000179!3.48e-11!15;UBERON:0000463!3.48e-11!15;UBERON:0003081!2.38e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.60e-18,76;UBERON:0002390,1.12e-17,98;UBERON:0003061,1.12e-17,98;UBERON:0001474,2.78e-16,82;UBERON:0002193,8.63e-16,108;UBERON:0004765,1.24e-14,90;UBERON:0002405,4.38e-14,93;UBERON:0001434,6.18e-13,100;UBERON:0003081,4.32e-07,203;UBERON:0002204,8.74e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,1.15148819429164,0.309632246632152,0,0,0,0,0.284338464974843,0,2.21598163412751,2.60707781711184,1.73608696572681,0.447830948479849,0.971680998056939,1.54545340580512,0.581592955118259,0.755751887377619,0.970336244751265,0.464858073811369,0,0.309706370895104,0,0,0.236482229888585,1.03423704220986,0.645484683583826,0,0.188242339542605,0.545812300115692,0.674170453335254,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.736555271975129,0,0.422510572623884,0.850417199860174,1.25795187305026,0.561643155732475,1.65194582125657,1.44653028027372,0.855038231223746,0.79566670879636,1.46131323011707,0,0.546138611262131,0.889509253863555,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.602300476311091,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,2.10603838625314,4.45893486866185,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52031382288914,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,20.2231896465739,5.9832291840805,14.5045429702612,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.714695326373367,0.822724546172388,0.648473311192717,2.16012574895246,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,0.443511850813194,0.115233987555779,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,3.76253837089218,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,1.15148819429164,0.309632246632152,0,0,0,0,0.284338464974843,0,2.21598163412751,2.60707781711184,1.73608696572681,0.447830948479849,0.971680998056939,1.54545340580512,0.581592955118259,0.755751887377619,0.970336244751265,0.464858073811369,0,0.309706370895104,0,0,0.236482229888585,1.03423704220986,0.645484683583826,0,0.188242339542605,0.545812300115692,0.674170453335254,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.736555271975129,0,0.422510572623884,0.850417199860174,1.25795187305026,0.561643155732475,1.65194582125657,1.44653028027372,0.855038231223746,0.79566670879636,1.46131323011707,0,0.546138611262131,0.889509253863555,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.602300476311091,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,2.10603838625314,4.45893486866185,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52031382288914,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,20.2231896465739,5.9832291840805,14.5045429702612,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.714695326373367,0.822724546172388,0.648473311192717,2.16012574895246,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,0.443511850813194,0.115233987555779,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,3.76253837089218,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p17@TMCC1 | |short_description=p17@TMCC1 | ||
}} | }} |
Latest revision as of 18:23, 24 September 2015
Short description: | p17@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TMCC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 400bp_to_CR749206_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.60e-18 | 76 |
hematopoietic system | 1.12e-17 | 98 |
blood island | 1.12e-17 | 98 |
bone element | 2.78e-16 | 82 |
hemolymphoid system | 8.63e-16 | 108 |
skeletal element | 1.24e-14 | 90 |
immune system | 4.38e-14 | 93 |
skeletal system | 6.18e-13 | 100 |
lateral plate mesoderm | 4.32e-07 | 203 |
musculoskeletal system | 8.74e-07 | 167 |