FFCP PHASE1:Hg19::chr12:7261772..7261874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51279 | |EntrezGene=51279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21265 | |HGNC=21265 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZP8,E7ER29,F5H6S5,F5GWF3,F5H2Z5,F5H7C8,Q6P672 | |UniProt=Q9NZP8,E7ER29,F5H6S5,F5GWF3,F5H2Z5,F5H7C8,Q6P672 | ||
|association_with_transcript=0bp_to_ENST00000266542,ENST00000396661,ENST00000543933,ENST00000544702,ENST00000545280,ENST00000545337,NM_016546,uc001qsn.2,uc001qso.1,uc009zft.2_5end | |association_with_transcript=0bp_to_ENST00000266542,ENST00000396661,ENST00000543933,ENST00000544702,ENST00000545280,ENST00000545337,NM_016546,uc001qsn.2,uc001qso.1,uc009zft.2_5end | ||
|cluster_id=chr12:7261772..7261874,- | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_1_at_C1RL_5end | |description=CAGE_peak_1_at_C1RL_5end | ||
|id=chr12:7261772..7261874,- | |id=chr12:7261772..7261874,- | ||
|ontology_enrichment_celltype=CL:0000183!8.17e-07!59 | |ontology_enrichment_celltype=CL:0000183!8.17e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.57e-12!659;UBERON:0000926!3.59e-12!448;UBERON:0004120!3.59e-12!448;UBERON:0006603!3.59e-12!448;UBERON:0002100!2.27e-11!216;UBERON:0003104!4.91e-11!238;UBERON:0009142!4.91e-11!238;UBERON:0000467!5.31e-11!625;UBERON:0005256!5.78e-11!143;UBERON:0000481!6.99e-11!347;UBERON:0000480!8.73e-11!626;UBERON:0004119!1.27e-09!169;UBERON:0000925!1.27e-09!169;UBERON:0006595!1.27e-09!169;UBERON:0003914!1.51e-09!118;UBERON:0001007!9.49e-09!155;UBERON:0001555!9.49e-09!155;UBERON:0007026!9.49e-09!155;UBERON:0004535!1.04e-08!110;UBERON:0000490!1.50e-08!138;UBERON:0001009!1.64e-08!113;UBERON:0000466!1.84e-08!126;UBERON:0002050!2.04e-08!605;UBERON:0005423!2.04e-08!605;UBERON:0000922!2.22e-08!612;UBERON:0000923!2.34e-08!604;UBERON:0005291!2.34e-08!604;UBERON:0006598!2.34e-08!604;UBERON:0002532!2.34e-08!604;UBERON:0000477!4.33e-08!286;UBERON:0004111!1.39e-07!241;UBERON:0004921!1.40e-07!129;UBERON:0004185!1.40e-07!129;UBERON:0000475!2.34e-07!365 | |ontology_enrichment_uberon=UBERON:0000468!3.57e-12!659;UBERON:0000926!3.59e-12!448;UBERON:0004120!3.59e-12!448;UBERON:0006603!3.59e-12!448;UBERON:0002100!2.27e-11!216;UBERON:0003104!4.91e-11!238;UBERON:0009142!4.91e-11!238;UBERON:0000467!5.31e-11!625;UBERON:0005256!5.78e-11!143;UBERON:0000481!6.99e-11!347;UBERON:0000480!8.73e-11!626;UBERON:0004119!1.27e-09!169;UBERON:0000925!1.27e-09!169;UBERON:0006595!1.27e-09!169;UBERON:0003914!1.51e-09!118;UBERON:0001007!9.49e-09!155;UBERON:0001555!9.49e-09!155;UBERON:0007026!9.49e-09!155;UBERON:0004535!1.04e-08!110;UBERON:0000490!1.50e-08!138;UBERON:0001009!1.64e-08!113;UBERON:0000466!1.84e-08!126;UBERON:0002050!2.04e-08!605;UBERON:0005423!2.04e-08!605;UBERON:0000922!2.22e-08!612;UBERON:0000923!2.34e-08!604;UBERON:0005291!2.34e-08!604;UBERON:0006598!2.34e-08!604;UBERON:0002532!2.34e-08!604;UBERON:0000477!4.33e-08!286;UBERON:0004111!1.39e-07!241;UBERON:0004921!1.40e-07!129;UBERON:0004185!1.40e-07!129;UBERON:0000475!2.34e-07!365 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.26e-13,160;UBERON:0009142,2.26e-13,160;UBERON:0005256,5.06e-11,122;UBERON:0002100,9.61e-11,199;UBERON:0004119,5.81e-10,160;UBERON:0000925,5.81e-10,160;UBERON:0006595,5.81e-10,160;UBERON:0003914,2.95e-09,117;UBERON:0001007,8.01e-09,145;UBERON:0001555,8.01e-09,145;UBERON:0007026,8.01e-09,145;UBERON:0004535,8.27e-09,109;UBERON:0001009,1.31e-08,112;UBERON:0000490,7.81e-08,148;UBERON:0005423,1.55e-07,581;UBERON:0004921,2.05e-07,118;UBERON:0004111,2.23e-07,240;UBERON:0000922,2.85e-07,592;UBERON:0000923,4.79e-07,560;UBERON:0010316,4.79e-07,560;UBERON:0005291,4.79e-07,560;UBERON:0006598,4.79e-07,560;UBERON:0010317,4.79e-07,560;UBERON:0002532,4.79e-07,560;UBERON:0002050,5.76e-07,564;UBERON:0002385,9.44e-07,64;UBERON:0001015,9.44e-07,64;UBERON:0000383,9.44e-07,64 | |||
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| ||
|short_description=p1@C1RL | |short_description=p1@C1RL | ||
}} | }} |
Latest revision as of 18:21, 24 September 2015
Short description: | p1@C1RL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1RL_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_ENST00000266542, ENST00000396661, ENST00000543933, ENST00000544702, ENST00000545280, ENST00000545337, NM_016546, uc001qsn.2, uc001qso.1, uc009zft.2_5end |
EntrezGene: | C1RL |
HGNC: | 21265 |
UniProt: | Q9NZP8E7ER29F5H6S5F5GWF3F5H2Z5F5H7C8Q6P672 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.26e-13 | 160 |
entire embryonic mesenchyme | 2.26e-13 | 160 |
trunk mesenchyme | 5.06e-11 | 122 |
trunk | 9.61e-11 | 199 |
endoderm-derived structure | 5.81e-10 | 160 |
endoderm | 5.81e-10 | 160 |
presumptive endoderm | 5.81e-10 | 160 |
epithelial tube | 2.95e-09 | 117 |
digestive system | 8.01e-09 | 145 |
digestive tract | 8.01e-09 | 145 |
primitive gut | 8.01e-09 | 145 |
cardiovascular system | 8.27e-09 | 109 |
circulatory system | 1.31e-08 | 112 |
unilaminar epithelium | 7.81e-08 | 148 |
developing anatomical structure | 1.55e-07 | 581 |
subdivision of digestive tract | 2.05e-07 | 118 |
anatomical conduit | 2.23e-07 | 240 |
embryo | 2.85e-07 | 592 |
germ layer | 4.79e-07 | 560 |
germ layer / neural crest | 4.79e-07 | 560 |
embryonic tissue | 4.79e-07 | 560 |
presumptive structure | 4.79e-07 | 560 |
germ layer / neural crest derived structure | 4.79e-07 | 560 |
epiblast (generic) | 4.79e-07 | 560 |
embryonic structure | 5.76e-07 | 564 |
muscle tissue | 9.44e-07 | 64 |
musculature | 9.44e-07 | 64 |
musculature of body | 9.44e-07 | 64 |